Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01334 ATGGAAGCCATTTCCGAGCTTCTCACAACTCGCAGTTGGACCACTCACTTCGTCAATTCCACCCCCCCAATGTTCGCTTTATCCCAATGCTTCAAAGATCTCTCTCACACTGATTGCCTTCTCTGCTACGCCGCCAGCCGCACCGCCCTTCCCCGCTGCCTCCCTGCCGTCTCTGCCCGGATTTTCCTCGACGGATGCTTCCTCCGGTATGACAATTACAGCTTCTATAAAGAATCCACTGATTCGCTTAGGGATTCTGTGAATTGCACCTCGGAATTGGGGAAAATCGATGAATCTGAGAGGCTAGGGTTTGGGAAGAATGTTAGGCTTGTTGTTGAGACTGTGACGAGGACGGCCATGGAGAATGGCGGATTTGGGATTGGGGAAGTTAATGGGATGTTTGGTTTGGCGCAGTGTTGGGGGAGTGTTGAGCCTGAGGGATGCAGAGCTTGCTTGGAGAAGGCGAAGAGGAGTATCAGGAGCTGTTTGCCGAGTAGAGAAGGGAGAGCTATGAATGCTGGGTGTTATTTGAGATATTCGACTGTGAAATTCTATAACGATAAGGATGAAGATCGGGATCATGATGGAATTTCTGGAAGGAGAGCAGTAGTTACCATTGCCTTAGCTTCAGCTGCCTCCTTGATCATCTTCTTTTCAGCCGTGTTTGCATGCTATACAAGAATAACAAAGTTCAAGAAAGAAAAGAAAAAGCAATCACTTATTCCAACTTCCTTCAAGGATTCCAATTTGAATTACAAGTATGAAACACTTGAAAAGGCAACTAATTACTTCAACCCATCAAGTAAGATAGGCCAAGGTGGAGCTGGTTCTGTATATAAAGGAACTCTTCCAAATGGGCAGGTTGTTGCTGTGAAGAGATTGGTTTTCCATACCAGGCAATGGGTTGATGAGTTCTTCAATGAGGTGAATTTAATCCGCGGAATCCAACACAAAAACCTTGTTGCCCTTTTAGGTTGCAGCATTGAAGGGCCTGAAAGTCTGCTGGTCTATGAGTATGTTCCGAACCGGAGCCTTGATCAGTTCATTTTCGATAAGAACAAGGTTCAGATTCTAAATTGGAAACAACGTTTCAATATTATTGTGGGAACAGCTGAAGGGCTTGCACATCTTCATGAAGGTTGTAAAATAAGAATAATCCATAGAGACATAAAGAGTAGCAATGTTCTACTGGATGAAAATTTCAATCCGAAGATTGCAGATTTTGGCCTCGCTCGGCATTTTGCAGCCGATCAGTCTCATCTTAGCACAGGAATTGCCGGGACACTGGGTTACATGGCTCCTGAATATCTCGTTCGAGGACAACTTACAGAAAAGGCTGATGTTTATAGTTTTGGAGTGTTGATACTCGAGATCGTTTGTGGTAGAAGAAACAGCTCCTTCACTGAGAATTCTACCCCACTCCTCCAAACAGTTTGGGATCTATACAAATCAGAGAGATTAACTGAAGCCATTGACACAAGCCTGAACAAGGATTACCCTGCAAAAGAAGCCATGGATGTTCTGCAAATAGGGCTTTTATGCACACAAGCTCTAGCTTCGTTGAGACCGTCAATGGCAACGATCGTGAAACTGCTAACCAGTGATGAAGAAAGGAAGGTTGCCATCCCTGAACAACCTCCATTTTTGAATCCTTGTGGACCTTCAAGAAGGTCTTGCAGAATTAGCAGCTTGGTATCTCATGCAGTTTCCAAACTTGAAGTTTCTTCTTGCACATCAACAGATTCAGGTTCTTCTTCTAACTTGCCTTCAAGAAGTGGAGATTTTGCTGAATTGAGTTCAAACTGA 1806 44.3 MEAISELLTTRSWTTHFVNSTPPMFALSQCFKDLSHTDCLLCYAASRTALPRCLPAVSARIFLDGCFLRYDNYSFYKESTDSLRDSVNCTSELGKIDESERLGFGKNVRLVVETVTRTAMENGGFGIGEVNGMFGLAQCWGSVEPEGCRACLEKAKRSIRSCLPSREGRAMNAGCYLRYSTVKFYNDKDEDRDHDGISGRRAVVTIALASAASLIIFFSAVFACYTRITKFKKEKKKQSLIPTSFKDSNLNYKYETLEKATNYFNPSSKIGQGGAGSVYKGTLPNGQVVAVKRLVFHTRQWVDEFFNEVNLIRGIQHKNLVALLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKVQILNWKQRFNIIVGTAEGLAHLHEGCKIRIIHRDIKSSNVLLDENFNPKIADFGLARHFAADQSHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSFGVLILEIVCGRRNSSFTENSTPLLQTVWDLYKSERLTEAIDTSLNKDYPAKEAMDVLQIGLLCTQALASLRPSMATIVKLLTSDEERKVAIPEQPPFLNPCGPSRRSCRISSLVSHAVSKLEVSSCTSTDSGSSSNLPSRSGDFAELSSN 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28305246 28310037 - ClCG10G014010.2 Cla10g01334 282993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01334 601 Gene3D Transferase(Phosphotransferase) domain 1 340 545 - -
Cla10g01334 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 385 397 IPR008271 GO:0004672|GO:0006468
Cla10g01334 601 MobiDBLite consensus disorder prediction 576 601 - -
Cla10g01334 601 ProSiteProfiles Gnk2-homologous domain profile. 84 184 IPR002902 -
Cla10g01334 601 Gene3D - 5 75 IPR038408 -
Cla10g01334 601 Gene3D - 91 184 IPR038408 -
Cla10g01334 601 CDD STKc_IRAK 270 533 - -
Cla10g01334 601 ProSiteProfiles Gnk2-homologous domain profile. 1 75 IPR002902 -
Cla10g01334 601 Pfam Protein kinase domain 266 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01334 601 Pfam Salt stress response/antifungal 99 181 IPR002902 -
Cla10g01334 601 Pfam Salt stress response/antifungal 20 73 IPR002902 -
Cla10g01334 601 SUPERFAMILY Protein kinase-like (PK-like) 239 532 IPR011009 -
Cla10g01334 601 SMART serkin_6 264 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01334 601 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 1 586 - -
Cla10g01334 601 ProSiteProfiles Protein kinase domain profile. 264 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01334 601 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 586 - -
Cla10g01334 601 Gene3D Phosphorylase Kinase; domain 1 224 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g01738 Cla-Chr8:29872343 Cla10g01334 Cla-Chr10:28305246 1.44E-97 dispersed
Cla10g01334 Cla-Chr10:28305246 Cla03g00496 Cla-Chr3:5524353 2.82E-90 dispersed
Cla05g01034 Cla-Chr5:10617308 Cla10g01334 Cla-Chr10:28305246 4.30E-77 transposed
Cla10g01334 Cla-Chr10:28305246 Cla05g02559 Cla-Chr5:36880979 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80869 PF00069 Pkinase 5.10E-46 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01334 - - csv:101218775 1090.1