Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g01357 | ATGAAAGAAAAGAGTGAAAGTGGAGGTGGGTATGTGAGAGCAGATCAAATAGATCTGAAGAGCTTAGACGAGCAGTTACAGAGACATTTGAGCAAAGCATGGACCATGGAGAAGAACAAGAAGAGGGAAGATGAGGAAGGCGTCGGCGTCGGCGGCGGTGGAGGAGGAGGCGTCGGCGGAGGAAGGCCGGCTATCACTAGGCAGGAGTGGGAGATTGACCCTTCTAAACTCATCATCAAAGCCGTCATAGCTCGTGGCACTTTTGGAACTGTTCATCGTGGAATTTATGATGGTCAAGATGTTGCTGTTAAACTTCTTGACTGGGGGGAAGAGGGGCATAGGTCGGAGGCAGAAATCGCGTCGCTTAGAGCGGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTTACAAAGTTTATAGGAGCAACAATAGGCTCCTCAGATCTACACGTACAAACAGAAAACGGCCAAATTGGCATGCCCAGCAATATTTGTTGTGTTGTTGTTGAATATTGTCCTGGAGGTGCTCTGAAATCCTACCTCATAAAGAACAGGAGGAAAAAGCTGGCTTTCAAAGTAGTCGTGCAGCTAGCATTAGACCTTGCAAGAGGGTTGAGCTATCTTCATTCACAGAAGATTGTTCATAGAGATGTCAAAACAGAAAATATGCTTCTGGACAAAACGAGAACGGTAAAAATTGCAGACTTTGGCGTTGCTCGTGTTGAGGCCTCAAATCCCAATGATATGACTGGCGAGACTGGAACACTTGGGTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTATGGGAAATATACTGCTGCGATATGCCATATCCCGACCTTAGCTTCTCAGAAGTGACATCAGCTGTTGTCCGACAGAATCTGAGGCCAGAGATTCCTCGGTGTTGCCCGAGCTCGCTTGCAAATGTAATGAAGCGATGCTGGGATGCTAACCCGGACAAGCGTCCAGAGATGGATGAGGTTGTAACCATGTTGGAAGCAATCGACACATCAAAGGGTGGAGGTATGATCCCCCTCGATCAGTCGCAAGGCTGTTTTTGCTTCCGCAGGTACCGGGGGCCTTGA | 1143 | 47.51 | MKEKSESGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKKREDEEGVGVGGGGGGGVGGGRPAITRQEWEIDPSKLIIKAVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATIGSSDLHVQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPLDQSQGCFCFRRYRGP | 380 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 28613891 | 28617920 | + | ClCG10G014250.1 | Cla10g01357 | 283016 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g01357 | 380 | MobiDBLite | consensus disorder prediction | 32 | 64 | - | - | |
Cla10g01357 | 380 | Gene3D | Transferase(Phosphotransferase) domain 1 | 177 | 367 | - | - | |
Cla10g01357 | 380 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 218 | 230 | IPR008271 | GO:0004672|GO:0006468 | |
Cla10g01357 | 380 | ProSiteProfiles | Protein kinase domain profile. | 77 | 354 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g01357 | 380 | SUPERFAMILY | Protein kinase-like (PK-like) | 63 | 351 | IPR011009 | - | |
Cla10g01357 | 380 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 1 | 374 | - | - | |
Cla10g01357 | 380 | Pfam | Protein tyrosine and serine/threonine kinase | 79 | 351 | IPR001245 | GO:0004672|GO:0006468 | |
Cla10g01357 | 380 | SMART | serkin_6 | 77 | 354 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g01357 | 380 | PRINTS | Tyrosine kinase catalytic domain signature | 174 | 187 | IPR001245 | GO:0004672|GO:0006468 | |
Cla10g01357 | 380 | PRINTS | Tyrosine kinase catalytic domain signature | 212 | 230 | IPR001245 | GO:0004672|GO:0006468 | |
Cla10g01357 | 380 | PRINTS | Tyrosine kinase catalytic domain signature | 278 | 300 | IPR001245 | GO:0004672|GO:0006468 | |
Cla10g01357 | 380 | PRINTS | Tyrosine kinase catalytic domain signature | 322 | 344 | IPR001245 | GO:0004672|GO:0006468 | |
Cla10g01357 | 380 | MobiDBLite | consensus disorder prediction | 32 | 48 | - | - | |
Cla10g01357 | 380 | Gene3D | Phosphorylase Kinase; domain 1 | 64 | 160 | - | - | |
Cla10g01357 | 380 | CDD | STKc_MAP3K-like | 83 | 351 | - | - | |
Cla10g01357 | 380 | PANTHER | DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED | 1 | 374 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g00519 | Cla-Chr5:4824442 | Cla10g01357 | Cla-Chr10:28613891 | 1.82E-133 | dispersed | |
Cla09g00676 | Cla-Chr9:6423803 | Cla10g01357 | Cla-Chr10:28613891 | 0 | dispersed | |
Cla10g01357 | Cla-Chr10:28613891 | Cla11g01089 | Cla-Chr11:22239628 | 2.02E-68 | dispersed | |
Cla05g01732 | Cla-Chr5:29135626 | Cla10g01357 | Cla-Chr10:28613891 | 4.20E-18 | transposed | |
Cla01g01294 | Cla-Chr1:26249281 | Cla10g01357 | Cla-Chr10:28613891 | 7.30E-64 | wgd | |
Cla10g01357 | Cla-Chr10:28613891 | Cla06g01655 | Cla-Chr6:30061814 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80872 | PF07714 | PK_Tyr_Ser-Thr | 2.10E-64 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g01357 | - | - | csv:101212631 | 749.584 |