Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01357 ATGAAAGAAAAGAGTGAAAGTGGAGGTGGGTATGTGAGAGCAGATCAAATAGATCTGAAGAGCTTAGACGAGCAGTTACAGAGACATTTGAGCAAAGCATGGACCATGGAGAAGAACAAGAAGAGGGAAGATGAGGAAGGCGTCGGCGTCGGCGGCGGTGGAGGAGGAGGCGTCGGCGGAGGAAGGCCGGCTATCACTAGGCAGGAGTGGGAGATTGACCCTTCTAAACTCATCATCAAAGCCGTCATAGCTCGTGGCACTTTTGGAACTGTTCATCGTGGAATTTATGATGGTCAAGATGTTGCTGTTAAACTTCTTGACTGGGGGGAAGAGGGGCATAGGTCGGAGGCAGAAATCGCGTCGCTTAGAGCGGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTTACAAAGTTTATAGGAGCAACAATAGGCTCCTCAGATCTACACGTACAAACAGAAAACGGCCAAATTGGCATGCCCAGCAATATTTGTTGTGTTGTTGTTGAATATTGTCCTGGAGGTGCTCTGAAATCCTACCTCATAAAGAACAGGAGGAAAAAGCTGGCTTTCAAAGTAGTCGTGCAGCTAGCATTAGACCTTGCAAGAGGGTTGAGCTATCTTCATTCACAGAAGATTGTTCATAGAGATGTCAAAACAGAAAATATGCTTCTGGACAAAACGAGAACGGTAAAAATTGCAGACTTTGGCGTTGCTCGTGTTGAGGCCTCAAATCCCAATGATATGACTGGCGAGACTGGAACACTTGGGTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTATGGGAAATATACTGCTGCGATATGCCATATCCCGACCTTAGCTTCTCAGAAGTGACATCAGCTGTTGTCCGACAGAATCTGAGGCCAGAGATTCCTCGGTGTTGCCCGAGCTCGCTTGCAAATGTAATGAAGCGATGCTGGGATGCTAACCCGGACAAGCGTCCAGAGATGGATGAGGTTGTAACCATGTTGGAAGCAATCGACACATCAAAGGGTGGAGGTATGATCCCCCTCGATCAGTCGCAAGGCTGTTTTTGCTTCCGCAGGTACCGGGGGCCTTGA 1143 47.51 MKEKSESGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKKREDEEGVGVGGGGGGGVGGGRPAITRQEWEIDPSKLIIKAVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATIGSSDLHVQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPLDQSQGCFCFRRYRGP 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28613891 28617920 + ClCG10G014250.1 Cla10g01357 283016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01357 380 MobiDBLite consensus disorder prediction 32 64 - -
Cla10g01357 380 Gene3D Transferase(Phosphotransferase) domain 1 177 367 - -
Cla10g01357 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Cla10g01357 380 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01357 380 SUPERFAMILY Protein kinase-like (PK-like) 63 351 IPR011009 -
Cla10g01357 380 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 374 - -
Cla10g01357 380 Pfam Protein tyrosine and serine/threonine kinase 79 351 IPR001245 GO:0004672|GO:0006468
Cla10g01357 380 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01357 380 PRINTS Tyrosine kinase catalytic domain signature 174 187 IPR001245 GO:0004672|GO:0006468
Cla10g01357 380 PRINTS Tyrosine kinase catalytic domain signature 212 230 IPR001245 GO:0004672|GO:0006468
Cla10g01357 380 PRINTS Tyrosine kinase catalytic domain signature 278 300 IPR001245 GO:0004672|GO:0006468
Cla10g01357 380 PRINTS Tyrosine kinase catalytic domain signature 322 344 IPR001245 GO:0004672|GO:0006468
Cla10g01357 380 MobiDBLite consensus disorder prediction 32 48 - -
Cla10g01357 380 Gene3D Phosphorylase Kinase; domain 1 64 160 - -
Cla10g01357 380 CDD STKc_MAP3K-like 83 351 - -
Cla10g01357 380 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 374 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g00519 Cla-Chr5:4824442 Cla10g01357 Cla-Chr10:28613891 1.82E-133 dispersed
Cla09g00676 Cla-Chr9:6423803 Cla10g01357 Cla-Chr10:28613891 0 dispersed
Cla10g01357 Cla-Chr10:28613891 Cla11g01089 Cla-Chr11:22239628 2.02E-68 dispersed
Cla05g01732 Cla-Chr5:29135626 Cla10g01357 Cla-Chr10:28613891 4.20E-18 transposed
Cla01g01294 Cla-Chr1:26249281 Cla10g01357 Cla-Chr10:28613891 7.30E-64 wgd
Cla10g01357 Cla-Chr10:28613891 Cla06g01655 Cla-Chr6:30061814 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80872 PF07714 PK_Tyr_Ser-Thr 2.10E-64 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01357 - - csv:101212631 749.584