Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01386 ATGGACGACCATAACTCTCACCGATTCAGCAGCGGATTGGAATTAGGGAATTTCATTGCGACTTCAGATTTGTTGGAGCATTCATGGAAGGCGATTACGAAACTTCGAACTGAAATTAGCGCACCCATTTATTTGGCCTTTTATGGATATTACAATGAGCGATCGAATTGTAAAATTATTGCGTTTGTTACTACTCCGAACTGTACGGAAAATCCTCTTGAAGAAGATGGAGGAGAAGATCTGGTTTCGCTTTCGGATCTGCTCAATGATGAGTTTACTGCGTTTGAGTTTCTTCAAACTAAAACATGCCCGGATTCCGCCATTAATGGAGTTGCTCTTGACCTCTTTCGCCGTTTCTATCCTGTCTATGAACAAGAGGTATTCTTCTTCTGCTGCTTCTTCTTCTTCTTCTTCTCCCCTTTTCCGATTATTTACTTTCGCAATGTTTACCTAAAATACATTTTAGTCTATATTTTTGTCAGTCTACTATGTCATATTTCAAGGCTGATATCCAATTCCAAAACCCAACTAATAATCACAGGACATGGTTTAGGAGGATCAGTTGCTTCTCTCTTCACATTATTACTTCTCGACTCCATAGATCTCACCAAGACCAAACGCCCTCTCTGTATAACTTTTGGTTCTCCTCTATTAGGCAATGAAGCCTTTCAAAATGCCATTTCACAGTTCTCAACTTGGTCTTCTTGCTTCCTTCATCTTGTCTCCAATCAAGACCCTCTTCCTAGAAAGTTCTTGAACAACAAAGCTTACTATCCTTTTGGCACTTTCTTGTTCTGCTCCCAATCTGGTGGTTGTTCTTGTTTCGAAGGCCCGAAATCGATCTTGAAATTGTTGGAAGCAACCAAAGCTAGTAATGGTGTTCTTCTTACTTATTCTTCATTCTTTGATTATAAAGAAACAATTGATTGTTTGATAAAGCAGGCCAATCTTAAGGCTACTATGAAGATGATCCCAGAAAATGTAGAATTGTGGATAGAGAGCTTTGTAGCACAACTTGAAGCTATTGGAGTTGCTCAAAATCAACAGCAACAGCAACAGAGAGTAGGAGATGTTAACAGACTTGCTAAAACATTAAAAGACAACGAGATGAACCTTATACTTGAGAACACAAAACCTTTTGCCAAGACCTTAAATGACGTAAAGATAAACATGGCAAAACTTGAATGGTACAAGAAGAAGTGTAAGTTTGATAACATTGGTTACTATGACAGCTACAAAAGTCAAAGAAGTGAACCTGACATTAGAGTTGCTGAGTTCAAAAAGATCCTACAAGTTTACTGGGAAAATAAGGTAGAGGAAGGAGAAAGAAAGCCACTTAAGGATGGAGCTCCATTCAATGTACAATTATTGTTCGGAGGGACGAATTTCCGACGAATGGTCGAACCACTCGACATCGCTGAACACTACCGAAAGGGGTTGACCGACTACAAATCTCACAGGCCAAAGCATTATACTAAGCTTGAACAATGGTTCAAAGAGTCAGCGATTCCTGATTCGAGTTTTATGCAAAGAGAAGCGGTTTCTTCTATACTTACTGTGGATTCTCTGTTTTGGGAACATGTGGAAGAGGCTGTTCTGGCATGTAATGTGCTCAAAGAGGTGGATTGTAGTGAAGAAGAAAGGGAAGCAGAACTAGCTAAGCTTAGAGAATTCGAGGATTATGTAGTGGAATCGATGAAGAACTATGCTGTATCTTCTGAGATTTTCTTGCCACAAAGCACTTTCATGAGATGGTGGAAAGAATATGATGAGATTGTGGGAGACGATCATGACTCAGTGCTCTCAAGGTTTTATTTTTCACAAAAGGGCATATCGAGATCGAAGCGCGTGGATTCAAGCTACGACGCCGTTTTTGCTCGTCTTCTTTCCCTCTGTAAAACCTCTCGTCGTTGTCTTCTTCTTCTTCAGTTCACTGAAATCTTTCTTCTTTCTTTAGAGAGAAAGAGAGAGATAGCAATGGAGATTCTGAAGTTTCTCTTCATTCTTCTCTCTACGGCGGCGTTTTTGTCTCTATCGGAATCCGTTCCTCTCTCGGCGAATTACTACCAGAAATCCTGCCCGAGATTCAGTCAGATTATCCAAGATACAGTCACCAACAAGCAGATCACTAGCCCTTCCACCGCCGCCGGAACTCTTCGTCTCTTGCTCCACGACTGTCTTCCTAACGGCTGCGATGGCTCCGTCCTCATCTCCTCCACTCCCTTCAACAAAGCCGAGCGCGACGCCGACATCAACCTCTCTCTCCCAGGCGACGCCTTCGATGTTATTGTTCGGGCCAAGACCGCTCTCGAGCTCGCATGTCCCAACACCGTCTCCTGTGCTGACATTCTCGCCGTTGCCACTCGCGACCTCGTCACCATGGTTGGCGGACCTTACTACAATGTTCTCCTCGGTCGCAGAGATGGCCGAGTGTCTAAAGCTTCGACGATTCCTGGTGCTCTACCGAAAGCTACCTCGCCGATTCCTCAGATTATTGATATTTTTAAAGCTCGGGGGTTTACTATCCAGGAAATGGTAGCGTTAAGTGGTGCTCATACGATTGGATTCTCGCATTGTAAGGAATTCAGCTCTCAGATCTATAATTATAGCAAGTCGTCTTCGTATGATTCGCAGTATAACCCTAGATTCGCGCAAGGATTGCAGAAGGCTTGTTCTGGTTTTGAAAAGAATCCTACATTATCGGTTTTCAATGACATTATGACTCCCAATAAATTTGATAACTCTTACTTCCAGAATCTGCCGAAGGGATTGGGGATCTTGCAGTCTGATCATGGGTTGTATAATGATTGGAGGACGAGGCCATTCGTAGAGGCGTATGCGGCAGATGAGAAAAAGTTCTTCAACGATTTTGCTCGGGCGATGGAGAAGTTGAGTAATTATAAAGTTGTGACAGGCAATCAAGGGGAGATTCGGCATAAGTGTGATGCGATTAATTGA 2958 42.56 MDDHNSHRFSSGLELGNFIATSDLLEHSWKAITKLRTEISAPIYLAFYGYYNERSNCKIIAFVTTPNCTENPLEEDGGEDLVSLSDLLNDEFTAFEFLQTKTCPDSAINGVALDLFRRFYPVYEQEVFFFCCFFFFFFSPFPIIYFRNVYLKYILVYIFVSLLCHISRLISNSKTQLIITGHGLGGSVASLFTLLLLDSIDLTKTKRPLCITFGSPLLGNEAFQNAISQFSTWSSCFLHLVSNQDPLPRKFLNNKAYYPFGTFLFCSQSGGCSCFEGPKSILKLLEATKASNGVLLTYSSFFDYKETIDCLIKQANLKATMKMIPENVELWIESFVAQLEAIGVAQNQQQQQQRVGDVNRLAKTLKDNEMNLILENTKPFAKTLNDVKINMAKLEWYKKKCKFDNIGYYDSYKSQRSEPDIRVAEFKKILQVYWENKVEEGERKPLKDGAPFNVQLLFGGTNFRRMVEPLDIAEHYRKGLTDYKSHRPKHYTKLEQWFKESAIPDSSFMQREAVSSILTVDSLFWEHVEEAVLACNVLKEVDCSEEEREAELAKLREFEDYVVESMKNYAVSSEIFLPQSTFMRWWKEYDEIVGDDHDSVLSRFYFSQKGISRSKRVDSSYDAVFARLLSLCKTSRRCLLLLQFTEIFLLSLERKREIAMEILKFLFILLSTAAFLSLSESVPLSANYYQKSCPRFSQIIQDTVTNKQITSPSTAAGTLRLLLHDCLPNGCDGSVLISSTPFNKAERDADINLSLPGDAFDVIVRAKTALELACPNTVSCADILAVATRDLVTMVGGPYYNVLLGRRDGRVSKASTIPGALPKATSPIPQIIDIFKARGFTIQEMVALSGAHTIGFSHCKEFSSQIYNYSKSSSYDSQYNPRFAQGLQKACSGFEKNPTLSVFNDIMTPNKFDNSYFQNLPKGLGILQSDHGLYNDWRTRPFVEAYAADEKKFFNDFARAMEKLSNYKVVTGNQGEIRHKCDAIN 985
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28962334 28976563 + ClCG10G014530.2 Cla10g01386 283045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01386 985 Gene3D - 687 985 - -
Cla10g01386 985 PANTHER SENESCENCE-ASSOCIATED CARBOXYLESTERASE 101 6 120 IPR044603 GO:0006952|GO:0052689
Cla10g01386 985 PANTHER SENESCENCE-ASSOCIATED CARBOXYLESTERASE 101 159 605 IPR044603 GO:0006952|GO:0052689
Cla10g01386 985 Pfam Peroxidase 706 949 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 Pfam Enhanced disease susceptibility 1 protein EP domain 392 604 IPR041266 -
Cla10g01386 985 PANTHER SENESCENCE-ASSOCIATED CARBOXYLESTERASE 101 6 120 - -
Cla10g01386 985 PANTHER SENESCENCE-ASSOCIATED CARBOXYLESTERASE 101 159 605 - -
Cla10g01386 985 ProSitePatterns Peroxidases proximal heme-ligand signature. 844 854 IPR019793 -
Cla10g01386 985 Pfam Lipase (class 3) 163 250 IPR002921 GO:0006629
Cla10g01386 985 PRINTS Haem peroxidase superfamily signature 844 859 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 PRINTS Haem peroxidase superfamily signature 796 808 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 PRINTS Haem peroxidase superfamily signature 905 920 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 PRINTS Haem peroxidase superfamily signature 778 795 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 PRINTS Haem peroxidase superfamily signature 715 729 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 SUPERFAMILY alpha/beta-Hydrolases 150 297 IPR029058 -
Cla10g01386 985 Gene3D alpha/beta hydrolase 147 333 IPR029058 -
Cla10g01386 985 PRINTS Plant peroxidase signature 758 771 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 PRINTS Plant peroxidase signature 919 936 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 PRINTS Plant peroxidase signature 717 737 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 PRINTS Plant peroxidase signature 843 855 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 PRINTS Plant peroxidase signature 903 918 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 PRINTS Plant peroxidase signature 796 811 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 PRINTS Plant peroxidase signature 693 712 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 PRINTS Plant peroxidase signature 959 972 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 PRINTS Plant peroxidase signature 777 787 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 CDD secretory_peroxidase 684 984 IPR033905 GO:0004601|GO:0042744
Cla10g01386 985 Gene3D Peroxidase, domain 2 822 964 - -
Cla10g01386 985 ProSiteProfiles Plant heme peroxidase family profile. 683 985 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla10g01386 985 SUPERFAMILY Heme-dependent peroxidases 684 985 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01394 Cla-Chr1:28330345 Cla10g01386 Cla-Chr10:28962334 1.79E-133 dispersed
Cla04g00211 Cla-Chr4:6815917 Cla10g01386 Cla-Chr10:28962334 3.55E-16 dispersed
Cla06g01631 Cla-Chr6:29836743 Cla10g01386 Cla-Chr10:28962334 6.09E-10 dispersed
Cla09g00782 Cla-Chr9:7904575 Cla10g01386 Cla-Chr10:28962334 7.22E-06 dispersed
Cla10g01386 Cla-Chr10:28962334 Cla11g00911 Cla-Chr11:15464735 2.60E-80 dispersed
Cla10g01384 Cla-Chr10:28951968 Cla10g01386 Cla-Chr10:28962334 1.87E-52 proximal
Cla10g01386 Cla-Chr10:28962334 Cla06g01637 Cla-Chr6:29893824 6.14E-128 wgd
Cla10g01386 Cla-Chr10:28962334 Cla09g01824 Cla-Chr9:35882966 5.53E-156 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01386 K00430 - cmo:103487057 924.85