Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01387 ATGGCCGCCGCCGGAGGAACAGAGGCTTTCCCCGATCTCGGCCGCCACTGCCAGCACTCCGATTGCCACCAACTCGATTTCCTCCCCTTCACCTGCGACGGTTGCCAAAAGGTGTTCTGTTTGGAGCATCGCGGTTTAAAATCCCACGACTGTCCTAAATCCGATCGGAACAGCCGAAAAGTGGTGGTTTGCGAAATCTGCTCGACGTCGATCGAGACCACCGGAAAGGACGGCGGCGACGAGACCAGGATTTTGGAAAGGCATCACGAATCGGGAGATTGCGATCCGAGCAAGAAGAAGAAGCCTACATGTGCGGTGAGGCGGTGCCGGGAGATTCTTACGTTTTCCAATACTTGTGTTTGTAAAACCTGCCGGATGAAGGTGTGCTTGAAACACCGGTTTCCGGCGGAGCATGGTTGTGGACGGCCGTCGTCGACGGCAGCGGCGGTGGTAGATAAAGGGCGGTGGAATGAAAAGTTTATGGCGGCTTTGGGGTTGAGGAGCGGTAGCGATTGTGGGAAGAGAGAACGGCCGACGGCGGCGAAGGGATCTTCTCCGACTGCCCCATCTGTTAAAGCTTGTTGA 585 56.24 MAAAGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGLKSHDCPKSDRNSRKVVVCEICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCVCKTCRMKVCLKHRFPAEHGCGRPSSTAAAVVDKGRWNEKFMAALGLRSGSDCGKRERPTAAKGSSPTAPSVKAC 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28982017 28983010 + ClCG10G014550.1 Cla10g01387 283046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01387 194 ProSiteProfiles Zinc finger AN1-type profile. 98 148 IPR000058 GO:0008270
Cla10g01387 194 Gene3D - 81 157 IPR035896 -
Cla10g01387 194 MobiDBLite consensus disorder prediction 168 194 - -
Cla10g01387 194 SUPERFAMILY AN1-like Zinc finger 10 58 IPR035896 -
Cla10g01387 194 SMART AN1_Zf_4 17 56 IPR000058 GO:0008270
Cla10g01387 194 SMART AN1_Zf_4 104 145 IPR000058 GO:0008270
Cla10g01387 194 Pfam AN1-like Zinc finger 104 142 IPR000058 GO:0008270
Cla10g01387 194 Pfam AN1-like Zinc finger 17 54 IPR000058 GO:0008270
Cla10g01387 194 SUPERFAMILY AN1-like Zinc finger 96 148 IPR035896 -
Cla10g01387 194 Gene3D - 2 70 IPR035896 -
Cla10g01387 194 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 178 - -
Cla10g01387 194 ProSiteProfiles Zinc finger AN1-type profile. 11 59 IPR000058 GO:0008270
Cla10g01387 194 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 7 178 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00339 Cla-Chr4:11900463 Cla10g01387 Cla-Chr10:28982017 6.83E-39 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01387 - - csv:101220304 388.267