Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01421 ATGATTAAGAATCAGATCGATCGGCATCATCATCTTCCATCTGTTCTTGATAATCGAATTGCTGATTCTTCAACTCGGATCGCAAAAGAAGACTTTCATATTCTCCGATTCCTTGGCCTTTCTCTTCCTTCGTCTTCAACTGGCCTTGTAAATTCTCTTTCACAGTTCTGCATCGTTAGGTTTCTCTCGGAGGAGGCGTTTGGTTTCTTGCCATTGCTCTCCCCTTCCCTTTCCCCACTCCAGATCTTCTTCTCTTTCATTTCCTTACCGTTTCAATCAAGTTTCCAGAGAATGTATGGTTTTGAAGCGCTTACCTTCAACATTCATGGAGGCTATTTGGAGGCCATCGTCCGTGGACATAGGGCTGGCTTGCTGACCGCCGCTGATTATAACAATTTGTGTCAGTGCGAAACCCTAGATGATATCAAGATGCACCTCTCTGCCACTGAGTATGGTCCTTATCTCCAAAACGGTGGGCCTCTTATTCCACCAGATTTGCAGTATACTCTCGAGTCCCATGTCTTTAATGTAAAGCATCAAAGGATCGATGTGGTTTTGGATGAGACCCTCCGTTTTTCTTTTTTGATGAACGAACCATCTCCATTACATACAACAACCATTGTGGAGAAATGCACCCTTAAACTGGTTGACGAGTATAAGCACATGTTGTGCCAAGCCACTGAGCCTCTGTCTACCTTCTTAGAGTATATCACATATGGTCACATGATAGACAATGTTGTCCTTATTGTTACTGGAACCTTGCATGAGAGAGATGTTCAGGAACTGTTGGAGAAGTGCCACCCTTTGGGCATGTTTGACAGCATTGCTACCTTGGCAGTTGCTCAGAATATGCGGGAACTTTATAGATTGGTGCTTGTTGACACCCCTTTGGCTCCATACTTTTCAGAGTGTATCACATCTGAGGATTTGGATGACATGAACATAGAAATTATGAGGAATACTCTCTATAAGGCATACCTAGAGGATTTCTACAGGTTCTGTCAGAAACTGGGTGGTGCCACTGCTGAGATCATGTCTGACCTCCTTGCTTTTGAGGCTGATAGAAGGGCTGTGAATATTACCATAAATAGTATTGGCACTGAGCTTACCCGGGATGATCGAAGGAAGTTGTATTCCAATTTTGGCTTGCTTTATCCCTATGGTCATGAGGAACTTGCAATCTGTGAGGATATTGATCAGGTTCGTGGTGCCATGGAAAAATACCCTCCCTACCAGTCAATTTTTTCCAAGCTATCATATGGTGAGAGCCAGATGCTTGACAAGGCATTCTATGAAGAGGAGGTGAAAAGGCTATGCTTAGCATTTGAGCAACAGTTCCATTATGGTGTTTTCTTTGCATACATGAGGTTGAGGGAACAGGAGATTAGGAACCTAATGTGGATTTCGGAGTGTGTTGCTCAGAACCAGAAGTCGAGGGTTCACGACAGTGTTGTCTTCATATTTTAG 1467 43.56 MIKNQIDRHHHLPSVLDNRIADSSTRIAKEDFHILRFLGLSLPSSSTGLVNSLSQFCIVRFLSEEAFGFLPLLSPSLSPLQIFFSFISLPFQSSFQRMYGFEALTFNIHGGYLEAIVRGHRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNGGPLIPPDLQYTLESHVFNVKHQRIDVVLDETLRFSFLMNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAICEDIDQVRGAMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29251698 29257676 - ClCG10G014880.2 Cla10g01421 283080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01421 488 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 182 488 IPR016727 GO:0033179|GO:0046961|GO:1902600
Cla10g01421 488 PANTHER V-TYPE PROTON ATPASE SUBUNIT 182 488 - -
Cla10g01421 488 Gene3D ATP synthase (C/AC39) subunit, domain 3 111 265 IPR044911 -
Cla10g01421 488 SUPERFAMILY V-type ATP synthase subunit C 180 486 IPR036079 -
Cla10g01421 488 SUPERFAMILY V-type ATP synthase subunit C 111 175 IPR036079 -
Cla10g01421 488 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 98 158 IPR016727 GO:0033179|GO:0046961|GO:1902600
Cla10g01421 488 Pfam ATP synthase (C/AC39) subunit 113 173 IPR002843 GO:0046961
Cla10g01421 488 Pfam ATP synthase (C/AC39) subunit 193 481 IPR002843 GO:0046961
Cla10g01421 488 PANTHER V-TYPE PROTON ATPASE SUBUNIT 98 158 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01421 K02146 - csv:101203260 696.041