Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g01433 | ATGGACTTGACTCCTGCAATTTCCACCGCCGCCGCCACCATTTCCACCGGTGGAGGAGCTGTGAAATCCCCTGAATTCGACACTGAAACCCCCATCAAAATCCAACCCACCACCAAATCTCACCCGTTCACTAACGGCGTCCTCAAGCGCCACCACCACACGGCGCCGCCGCCTCCGCAGGTGGTTTACAAAGAATGCCTCAAGAATCACGCCGCCAGTTTGGGCGGTCATGCTCTAGACGGCTGCGGCGAGTTCATGTCATCCCCCACCGCCACCGCCACCGATCCCACCTCCCTCAAATGCGCTGCTTGCGGTTGCCACCGGAATTTCCACCGCCGTGAACCGGAGGATCCAATCGCTACTCCGACGACAACCCATGTCATTGAGTACCAACCCCATCACCGCCACCACCCACCGCCGCCGCCTGCGGCGGCCCACCGGAGCCCGAGTTCCGCCTCCCCCCCTCCGATCTCCTCCTCGTACTACCCTTCAGCACCCCACATGCTTCTCGCCCTCTCCGGTGGTTTGCCGGAGAACGCCGGCAGCGGTGGTGGATTCCACCACTCGATTCTGACTCCGAGCCCCAATTCGAGAAAGCGATTCAGAACGAAATTCACTCAAAATCAGAAGGAGAAAATGTACGAATTTGCAGAGAAAGTGGGATGGAAGATTCAGAAACGAGACGAGGATATGATTCAAGAATTCTGTAGCGATGTCGGAGTTGACAGAGGCGTTCTCAAAGTTTGGATGCACAACAACAAGAACACTCTCGGGAAAAAAGACGGCGGCCGGAACATCAACGGCAGCGGTGGCGATGGGGATGGCGACGACAAAATTAACGGCGGTGGCGAGCCACACGCCACCGCAAATGGATCGTCTTCTTCCTCTTGA | 891 | 57.46 | MDLTPAISTAAATISTGGGAVKSPEFDTETPIKIQPTTKSHPFTNGVLKRHHHTAPPPPQVVYKECLKNHAASLGGHALDGCGEFMSSPTATATDPTSLKCAACGCHRNFHRREPEDPIATPTTTHVIEYQPHHRHHPPPPPAAAHRSPSSASPPPISSSYYPSAPHMLLALSGGLPENAGSGGGFHHSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSDVGVDRGVLKVWMHNNKNTLGKKDGGRNINGSGGDGDGDDKINGGGEPHATANGSSSSS | 296 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 29446793 | 29447683 | - | ClCG10G015010.1 | Cla10g01433 | 283092 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g01433 | 296 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 63 | 114 | IPR006456 | - | |
Cla10g01433 | 296 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 198 | 255 | IPR006455 | - | |
Cla10g01433 | 296 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 1 | 269 | - | - | |
Cla10g01433 | 296 | PANTHER | HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN | 1 | 269 | - | - | |
Cla10g01433 | 296 | SUPERFAMILY | Homeodomain-like | 191 | 259 | IPR009057 | - | |
Cla10g01433 | 296 | MobiDBLite | consensus disorder prediction | 16 | 59 | - | - | |
Cla10g01433 | 296 | Gene3D | - | 191 | 259 | - | - | |
Cla10g01433 | 296 | MobiDBLite | consensus disorder prediction | 131 | 159 | - | - | |
Cla10g01433 | 296 | MobiDBLite | consensus disorder prediction | 254 | 296 | - | - | |
Cla10g01433 | 296 | Pfam | ZF-HD protein dimerisation region | 61 | 115 | IPR006456 | - | |
Cla10g01433 | 296 | MobiDBLite | consensus disorder prediction | 30 | 44 | - | - | |
Cla10g01433 | 296 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 63 | 114 | IPR006456 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla10g00822 | Cla-Chr10:18738109 | Cla10g01433 | Cla-Chr10:29446793 | 4.78E-47 | dispersed | |
Cla10g01433 | Cla-Chr10:29446793 | Cla11g00012 | Cla-Chr11:134411 | 4.32E-54 | dispersed | |
Cla04g01022 | Cla-Chr4:25332463 | Cla10g01433 | Cla-Chr10:29446793 | 1.23E-42 | transposed | |
Cla10g01433 | Cla-Chr10:29446793 | Cla05g02443 | Cla-Chr5:35886866 | 6.49E-59 | wgd | |
Cla10g01433 | Cla-Chr10:29446793 | Cla09g01783 | Cla-Chr9:35222422 | 1.90E-104 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61900 | PF04770 | ZF-HD_dimer | 7.50E-29 | No_clan | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g01433 | - | - | csv:101204974 | 490.345 |