Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01446 ATGATGTGGAATAATTGGATATGGGTGGTGGGTTTATTATGGTTGTTGGGATTATGGGGATGGAGAGTTGTGAATTGGGTTTGGGTTAGGCCGAAGAAGCTTGAGAAGTTCTTGAGACAGCAAGGCCTCGCCGGCAACTCTTATCGCTTTCTCTTGGGGGATACAAAGGAGATTGCGGCGGCCGTCCACCAAGCCAGATCGCAGCCGATGACCTTCTCCCATGATATTGCCCCACGCGCCACCCCTACCTCTCATACCACCATCCACAAATACGGTAAGGATTCTTTCACATGGGTTGGCACAACTCCAAGAGTGTATATAACAGAGCCTGAACAAGTGAAGATTGTTTTTTCTCAAATAAATGATATTCGTAAGACATCTTCTTTTCCCCTTAGACGAAGAGTGGGAAGTGGGCTTGTCTCTCTTGAGGGTTCTAAATGGGCTAAACATAGAAAGATCATCAACCCTGCATTTCACATGGAGAAGTTGAAGGAAATGTTTCCAGCATTCTCCAAGAGTTGTGGGGACATGGTTAACAAATGGGAAAAGATGATTCCTGAAGAAGGACATTGTGAAATAGATGTGTGGCCTGATTTACAAAATATGGCTGCCGATGTGATTTCTAGAACTGCATTTGGAAGTAGTTATGAGGAAGGGGAAAAGATCTTCCAGCTCTTGAAAGAGTGGGCTAAGCTATTGATGACATACCTAACAAAGGGAGCTTATTTCATTCCAGGGTTGAGGTATATGCCAACAAAATTAAACAAGAGAATGGGAGAGATTGATAGGAAAATACGAGATATGGTTTGGGGTATTATAAGCAAAAGACAGAATGCAATGAAGAAAGGTGAAGGTTCCAATAATGAAGATCTATTAGGCATTCTTTTAGAATCAAATGCAAATCAAATTGAAGAACAAGAAAACAAGAAAGATGTTGGAATGAGCATAGAAGAAGTAATAAGTGAATGCAGGCTTTTCTACTTTGCTGGGCAAGAAACCACAGCTGCATTGCTTGCTTGGACAATGGTTCTACTTGGTCGATACTCAGAGTGGCAAGACCGAGCAAGAGCAGAAGTCTTTGAAGTTTTTGGTGATAATAAGAAATGGGATTTTGAAGGTCTAAGTCGTCTAAGAGTAGTAACTATGATCCTAAATGAAGTCCTTAGGCTATACCCTCCCGTTGGAATGCTAGCTCGAGAGATTCACAAGGAAACAAAATTGGGCAATGTTACATTACCAGTTGGAGTATCAATAGGAATACCAATATTATCCATACACCATGACCCAAAAATATGGGGTGAAGATGCACTTGAGTTCAAACCAGAAAGATTTTCAGAAGGAATTTCCAAAGCAACAAAGAATCAAGTATGCTTTGTCCCTTTTGGATGGGGTCCTCGAATTTGCCTTGGCCAAAACTTTGCGTTGATTGAAGCCAAAATAGCATTATCCATGATTTTGCAACAATTCTCATTCACACTTTCTCCAACTTATACTCATGCTCCTATTGCAAACATCACTATTCAACCACAACATGGGGCTCATCTCGTCCTTCTTAAATCACAAACTTTTGATGATTTTTGGTTTGTTCAACAATGGCCACCCGCTGTTTGTGCTCTACAATCAGGACGATGTGTAGGACAGGGATTAAGATCATTCACAATTCATGGTTTGTGGCCTCAAAAAGGAGGGAGCTCTATAACTAATTGTGCTGGCAATTCCTTTGATTTTACTAAGATTGCACATTTAGAAAACAATCTAAACATAGTTTGGCCGAATGTGGTGACGGGAAACAACAAATTCTTCTGGGGTCATGAATGGAACAAACATGGAATTTGCTCAGAGAACAAGTTCGACCAGGCAAGCTTCTTCCAAATTGCGATAAACATGAGGAACAATATCAACCTTCTTAGTGTCTTGAGAACTGGTGGAGTAGTACCAAACGGTGCCTCAAAAGCGAAGCAAAGAGTAGAAAGCTTAATCTCAACCCATTTTGGAAGGGATCCCATTCTTCGGTGTAAAACAGCATCAAATGGCCAAGTCTTATTGACGGAGATTGTTATGTGCTTTGATGACGATGGTACCACCCTCATACACTGCAATAAAGCAAGATCCAATTGTGCTAGGAGTTTTATTTTTTGA 2139 40.95 MMWNNWIWVVGLLWLLGLWGWRVVNWVWVRPKKLEKFLRQQGLAGNSYRFLLGDTKEIAAAVHQARSQPMTFSHDIAPRATPTSHTTIHKYGKDSFTWVGTTPRVYITEPEQVKIVFSQINDIRKTSSFPLRRRVGSGLVSLEGSKWAKHRKIINPAFHMEKLKEMFPAFSKSCGDMVNKWEKMIPEEGHCEIDVWPDLQNMAADVISRTAFGSSYEEGEKIFQLLKEWAKLLMTYLTKGAYFIPGLRYMPTKLNKRMGEIDRKIRDMVWGIISKRQNAMKKGEGSNNEDLLGILLESNANQIEEQENKKDVGMSIEEVISECRLFYFAGQETTAALLAWTMVLLGRYSEWQDRARAEVFEVFGDNKKWDFEGLSRLRVVTMILNEVLRLYPPVGMLAREIHKETKLGNVTLPVGVSIGIPILSIHHDPKIWGEDALEFKPERFSEGISKATKNQVCFVPFGWGPRICLGQNFALIEAKIALSMILQQFSFTLSPTYTHAPIANITIQPQHGAHLVLLKSQTFDDFWFVQQWPPAVCALQSGRCVGQGLRSFTIHGLWPQKGGSSITNCAGNSFDFTKIAHLENNLNIVWPNVVTGNNKFFWGHEWNKHGICSENKFDQASFFQIAINMRNNINLLSVLRTGGVVPNGASKAKQRVESLISTHFGRDPILRCKTASNGQVLLTEIVMCFDDDGTTLIHCNKARSNCARSFIF 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29651052 29660590 + ClCG10G015150.2 Cla10g01446 283105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01446 712 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 18 517 - -
Cla10g01446 712 Pfam Ribonuclease T2 family 524 699 IPR001568 GO:0003723|GO:0033897
Cla10g01446 712 ProSitePatterns Ribonuclease T2 family histidine active site 1. 552 559 IPR018188 GO:0003723|GO:0033897
Cla10g01446 712 Gene3D - 524 710 IPR036430 GO:0003723|GO:0033897
Cla10g01446 712 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 517 - -
Cla10g01446 712 CDD RNase_T2_euk 523 711 IPR033697 -
Cla10g01446 712 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01446 712 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01446 712 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01446 712 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01446 712 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Cla10g01446 712 ProSitePatterns Ribonuclease T2 family histidine active site 2. 601 612 IPR033130 -
Cla10g01446 712 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01446 712 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01446 712 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01446 712 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01446 712 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01446 712 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01446 712 SUPERFAMILY Cytochrome P450 83 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01446 712 SUPERFAMILY Ribonuclease Rh-like 523 712 IPR036430 GO:0003723|GO:0033897
Cla10g01446 712 Gene3D Cytochrome P450 27 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01446 712 Pfam Cytochrome P450 89 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00503 Cla-Chr7:7214755 Cla10g01446 Cla-Chr10:29651052 2.04E-91 dispersed
Cla10g01446 Cla-Chr10:29651052 Cla11g01670 Cla-Chr11:30330034 0 dispersed
Cla10g01450 Cla-Chr10:29688330 Cla10g01446 Cla-Chr10:29651052 4.10E-117 dispersed
Cla10g01876 Cla-Chr10:34683696 Cla10g01446 Cla-Chr10:29651052 3.29E-32 dispersed
Cla10g01446 Cla-Chr10:29651052 Cla10g01447 Cla-Chr10:29666617 1.16E-107 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01446 - - csv:101207867 898.656