Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01453 ATGGAACCCAATACCATCACCAATTACGTCGCCGCTTCTCCGGCCACTCCTCAGCTTCCATCTTCTTTACCTATTCTCACACCCGGTGACGATAACACCGCCGCTGTTGATCATGACCACGATTCTTCTTCTTCAAGCTTGTCCCCGGAAGCCAATATCGATGGGGATGCTGAAGATCTGGAGGTCGATAAGATACCCATTTGCTTTATTGCCGATATCTTTGCTGCTTTTATATTGCTTCTATTCATTTTATTTACCAATTTGGAAAGCCTGTTTTGTTTACTTAATTTAGTGATGCAGAAATGCTGCTTTGATGCTTTCAGAATTTGGGTTAAAGTTATTGAGTTTGTTAGGAGTTTATTGAGATATCTTTTGAACTTGTGTCACTGTGGTAGAGGTTTGTTGCTTAAATTTGGTAATGAGACTATAAGAGGAAAATCAGGTGGAACTAAGCTGGAAGATGGAGATGGAGATGGAGATGGAGATGGAGATGGAGATGGAGATGGCGATGGAGATGGAGGCTTATCTGTTTCGACCGAAGAGTTTACTAATTCGGATACTTCTGCAGTGAGATCAGAGAATTCTAAAGTACTTTCTGGTGAGGAAAGTAATCCGTCAAGTACTACAAAGACTGATGAACAGAATGAAACAAGTAACTCGCAAGAGAAGACTCTCAAGAAACCCGACAAGATACTTCCGTGCCCCCGCTGTAACAGCATGGATACCAAGTTCTGTTATTATAATAACTACAATGTCAATCAACCGCGCCACTTTTGTAAGAACTGTCAAAGGTATTGGACTGCTGGAGGGACAATGAGGAATGTTCCTGTGGGTGCCGGACGTCGTAAGAACAAAAGCTCTGCTTCTCACCATCGTCAGATTATTGTTTCAGAATCGCTTCAGCATGCTCGGACTGATGTTTCTAATGGTATCCATCATTCTGCCCTCAAACCTAATGGCAATGTATTGGCATTTGGTTCAGATGCCCCTCTTTGTGAATCAATGGCTTCCATTTTGAACATTGCTGATAAAACAAGGCAGAATAGTACTAGAAATGGTTTTCAAAAACCTGAAGCTCTGAAAATTCCTGTGGCTTATGAGAATGGTGAAAATGATGATCAGTCTCAGGAATCTGCTGCAACTCCATCATTTATAAATAATGAAGAAGGCAAAACTGGGCCACAAGATCAAGTGATTCATAATTGTCAAGGCTTTTTACCTCCTCAGATTCCATTCTTCCCTGGGGCTCCTTGGCCTTACCCTTGGAATTCACCACAATGGAGCTCTCCTGTTCCACCTCCTACTTTCTATCCACCAGGCATCCCTATGCCGTTCTATCCGACCGCCCCGTTTTGGGGTTGTACCGTTCCCGGCGCCTGGACAGTCCCGTGGGTTTCCCAGCCACCATCTCTGAGCCCTGTTGCCCAAAACCATGCTCCCAACTCTCCAACCTTGGGGAAACATTCAAGAGATGAGAATGTGACCAAGCAAAGCGATTTTGGGGAAGACGAGCAGCAGAAAGATAACAAAGCTGAGAGATGTCTTTGGATACCAAAAACGTTGAGGATTGACGACCCCGGCGAAGCAGCTAAAAGCTCCATATGGGCAACTCTGGGAATAAAAAATGACAAGACTGATTCAGTCAGTGAAGGGCTTTTCAAGGCTTTTCAATCAAAGAAGACCAACGGAAAGAATCACAAAGCCGAAGCCTCTCCAGTCTTGCAAGTCAATCCAGCTGCATTGTCCAGATCAATCAAATTTCATGAAAGCTCGTAA 1776 43.86 MEPNTITNYVAASPATPQLPSSLPILTPGDDNTAAVDHDHDSSSSSLSPEANIDGDAEDLEVDKIPICFIADIFAAFILLLFILFTNLESLFCLLNLVMQKCCFDAFRIWVKVIEFVRSLLRYLLNLCHCGRGLLLKFGNETIRGKSGGTKLEDGDGDGDGDGDGDGDGDGDGGLSVSTEEFTNSDTSAVRSENSKVLSGEESNPSSTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSESLQHARTDVSNGIHHSALKPNGNVLAFGSDAPLCESMASILNIADKTRQNSTRNGFQKPEALKIPVAYENGENDDQSQESAATPSFINNEEGKTGPQDQVIHNCQGFLPPQIPFFPGAPWPYPWNSPQWSSPVPPPTFYPPGIPMPFYPTAPFWGCTVPGAWTVPWVSQPPSLSPVAQNHAPNSPTLGKHSRDENVTKQSDFGEDEQQKDNKAERCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFQSKKTNGKNHKAEASPVLQVNPAALSRSIKFHESS 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29720622 29723588 - ClCG10G015210.2 Cla10g01453 283112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01453 591 ProSiteProfiles Zinc finger Dof-type profile. 232 286 IPR003851 GO:0003677|GO:0006355
Cla10g01453 591 PANTHER CYCLIC DOF FACTOR 2 183 590 IPR045174 GO:0003700|GO:0006355
Cla10g01453 591 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 183 590 - -
Cla10g01453 591 MobiDBLite consensus disorder prediction 369 393 - -
Cla10g01453 591 MobiDBLite consensus disorder prediction 216 230 - -
Cla10g01453 591 MobiDBLite consensus disorder prediction 489 511 - -
Cla10g01453 591 MobiDBLite consensus disorder prediction 177 215 - -
Cla10g01453 591 MobiDBLite consensus disorder prediction 470 511 - -
Cla10g01453 591 MobiDBLite consensus disorder prediction 147 232 - -
Cla10g01453 591 MobiDBLite consensus disorder prediction 470 488 - -
Cla10g01453 591 ProSitePatterns Zinc finger Dof-type signature. 234 270 IPR003851 GO:0003677|GO:0006355
Cla10g01453 591 Pfam Dof domain, zinc finger 229 286 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g01194 Cla-Chr4:27094213 Cla10g01453 Cla-Chr10:29720622 6.45E-100 dispersed
Cla10g01453 Cla-Chr10:29720622 Cla01g00029 Cla-Chr1:197749 1.36E-25 dispersed
Cla10g01519 Cla-Chr10:30481283 Cla10g01453 Cla-Chr10:29720622 2.48E-69 transposed
Cla10g01453 Cla-Chr10:29720622 Cla05g02435 Cla-Chr5:35837765 9.80E-98 wgd
Cla10g01453 Cla-Chr10:29720622 Cla06g01588 Cla-Chr6:29416844 8.59E-129 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61901 PF02701 zf-Dof 2.70E-32 No_clan Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01453 - - cmo:103486992 841.262