Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01515 ATGCGAACATCTGACAGAAATCAACACCGCAAACTGTTCCGCATATGGATAAAACAGGTCCGTCTACTCAATTTCATTACGCTTTCATTCTGGCTTAGACGACAAAAACCACCCACATCTTTGGATTGGAAATGGAATGAGTTATCTCCAGAATTCCATTTCCATGTTATTAACAAAAGCTCGAGAAGAATCCACGGCAACCCTCAGGAAGATTGCCAGAGTTTTCTTCGTTTAACTGAGTTTGAAGCTAAGTGCTATGTTCTTAAATCCAACAACCCCTGTAACACCCAAGGGTACATAGATTATCTTTACATTTTCTATTGTCAGTATGGAAGTTTTAGCATCCTGGGCTACACTCTGTTGTTTCTGTGGCTTCTTGTGTTGTTCTATCTTTTGGGTAATACTGCTTCTGAATACTTTTGCTCTTCCCTTGAGAGCTTGTCAAAATTGTTGAATCTATCCCCAACAATTGCTGGTGTTACTCTGCTTTCTCTTGGCAATGGGGCACCTGATGTTTTTGCCAGCCTTGTTGCTTTCATGGGGGATGGAACTAGTGATATTGGCTTGAATACTGTTCTCGGCGGAGCCTCGTTTGTTACCTGCGTCGTCGTTGGAATCATTAGCATTTTGCTGCGTCGGCAATGGATTAAGGTGAATAGGTCTGCCTTCATTCGAGATGTTTTGTTCTTCCTCTTGGTTCTTTTGTCTGTTTTCCTGATATTGCTTCATGGTCATATCAATCTGTGGGGTTCCATTGGCTTTTCTTCCATGTATATTATTTATGTTTTGGTTGTTTATGTCTCCCATGCCCAATGGTTGAGTTTTAGAAGTGAAATCTGTGAACCCCTTTTGAAAGAACCACCAAAGGATGAGTTTGAGGGTCGAAATGAACCACAGGACAACGGTGACGATGATGACAACAATGATGATGTTAGAATTGATGTATATGATCTCTGTTTTTGTCCAAGATTATCACCTTCTTGTCTTTTTTTCCTTCGGATTCTTGAGGTCCCTCTTTACTTGCCTAGAAGATTGACAATTCCAGCCATTGCTGAAGAAAACTGGTCTAGACCATTTGCTGTTGCTTCAGTGACATTGGCCCCCCTTCTCTTATCTCTTCTATGGACATTTCACGACCAGAGTGATCAACCGTCACAATCGAACCTTATCATCTGTGTCATCGCTTCGTTGCTTGGAGTTAGTTTTGGAATTGTTGCATTTGCAACGACTGAGAATTCAAGCCCACCAAAGAAGTGCCTGTTCCCTTGGCTTGCAGCTGGCTTCACCATGAGTTTAACATGGAGTTACATTGTAGCTCAGGAACTGGTAGGCCTATTAGTTTCACTTGGCTACATAATGGGTATAAGCCCTTCAATCCTAGGACTTACCTTCCTTGCTTGGGGAAACTCTCTAGGGGATTTGGTTACCAATGTGACCATGGCTTTGAACGGCGGGCAGCGAGGCGCCCAAATCGCCATATCCGGTTGCTACGCTGGCCCCATCTTCAACACTCTGTTCGGCCTTGGGATATCTCTTGTTGGCGCTTCGTGGAAGAAGTATCCGCAGCCGGTCGCCATCCCTCCCGACCCTTATGTCATGGAGACATTGGGGCTGTTGGTAGGAGGGTTGCTTTGGGCACTTGTGGCTTTGCCAAGGAGAGAGATGAGGCTTGATGCTGTCTTGGGAGGAGGCCTTCTGGCTATCTATTTAACCTCTTTGCTCTTAAGGCTTTTGCAAGCTTTTGGTTCTTCCCATTAG 1758 44.25 MRTSDRNQHRKLFRIWIKQVRLLNFITLSFWLRRQKPPTSLDWKWNELSPEFHFHVINKSSRRIHGNPQEDCQSFLRLTEFEAKCYVLKSNNPCNTQGYIDYLYIFYCQYGSFSILGYTLLFLWLLVLFYLLGNTASEYFCSSLESLSKLLNLSPTIAGVTLLSLGNGAPDVFASLVAFMGDGTSDIGLNTVLGGASFVTCVVVGIISILLRRQWIKVNRSAFIRDVLFFLLVLLSVFLILLHGHINLWGSIGFSSMYIIYVLVVYVSHAQWLSFRSEICEPLLKEPPKDEFEGRNEPQDNGDDDDNNDDVRIDVYDLCFCPRLSPSCLFFLRILEVPLYLPRRLTIPAIAEENWSRPFAVASVTLAPLLLSLLWTFHDQSDQPSQSNLIICVIASLLGVSFGIVAFATTENSSPPKKCLFPWLAAGFTMSLTWSYIVAQELVGLLVSLGYIMGISPSILGLTFLAWGNSLGDLVTNVTMALNGGQRGAQIAISGCYAGPIFNTLFGLGISLVGASWKKYPQPVAIPPDPYVMETLGLLVGGLLWALVALPRREMRLDAVLGGGLLAIYLTSLLLRLLQAFGSSH 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30404035 30406393 - ClCG10G015870.1 Cla10g01515 283174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01515 585 Gene3D - 359 577 IPR044880 -
Cla10g01515 585 Gene3D - 153 279 IPR044880 -
Cla10g01515 585 Pfam Sodium/calcium exchanger protein 122 266 IPR004837 GO:0016021|GO:0055085
Cla10g01515 585 Pfam Sodium/calcium exchanger protein 424 575 IPR004837 GO:0016021|GO:0055085
Cla10g01515 585 PANTHER CATION/CALCIUM EXCHANGER 2 60 583 - -
Cla10g01515 585 MobiDBLite consensus disorder prediction 287 308 - -
Cla10g01515 585 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 60 583 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01440 Cla-Chr3:29962028 Cla10g01515 Cla-Chr10:30404035 1.61E-37 dispersed
Cla03g01620 Cla-Chr3:32087244 Cla10g01515 Cla-Chr10:30404035 7.98E-16 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01515 K13754 - csv:101204766 915.605