Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01521 ATGGATCGTCTCATCACCGTCGAGCCCTCTAGCCTCATCCCAATCAGAATCGAACCGGGCCAAAAATGCTCCGGCGAGCTTACCCTCCGGAACGTCATGTACACCATGCCCGTCGCCTTCCGGCTGCAGCCTCTCATCAAAGCCCGTTACACCTTTAAGCCCCAATCTGGAATCATTCCTCCACTCGCTACTTTAACAGTCGAAATCCTTTACCATCTTCCACCAGGCTTCAATCTCCCCGATTCCTTCCCTTATTCCGATGACTCTTTCCTCCTCCACAGCGTCGTCGTCCCCGGAGCCGCTATCAGAGACTCTTCCTCCAGCTTCGACTCTGTTCCTTCCGACTGGTTCACCACTAGAAAGAAACAGGTCTTCATCGATAGTGGGATTAAAGTTATGTTTGTGGGGTCGGCTGTGGTGGCGAGACTGGTGGCGGATGGGGCCATGGATCAGATTAGAGAGGTGTTGGAGAGGAGCGATCCGAGCTGGAGGGCGGTGGACTCTGTGGATGAACAGGGGAGGACTCTGCTTCACTTGGCGATTGGGCAGGGGAGGGCGGATTTGGTGCAGTTGTTGTTGGAGTTTAATCCGGATGTGGGGGCAGTGGGGCAGTGTGGGATGACGGCGCTGGAGACGGCGGCGGGGGCTGGGCAGGCGTTGATTGTGGAGCTGTTGTTGGCGAGGAAGGCGAGTACAGAGCGGGGGGAAGGGTCTGTGTTTGGGGCGGTTCATTTGGCGGCAGCGGGAGGGCATGTGGAAGTTTTGAGGCTGCTTTTAGTGAAAGGAGCTTGTGTCGATGCTCTGTCTAAGGATGGCGATACGGCACTTCATCTTGCTGTTCAAGAGCGCCGCCGCGACTGTGCTCGGCTGCTTCTCGCTAACGGCGCCAAACCGGATGTTCGCAATGCTGAACAAGGAGATACGGCGCTGCACATGGCGGCCAGAATCGGCGACGAGCAAATCGTGAAGCTTTTAATTCAAAAGGGAGCCAACAAAGACATCCGAAACTGGGCCGGAAAGCGGCCATACGACGTCGCTTTCGACCACTCCCACACCCGCCTCTTCGACGTCCTCCGCCTCGCCGACAAGCTCGCCACCGCCGCACGCAAGGGCGACGTCCGCTCAATCCAACTCCTCCTCGACAGCGGCGCCGCTATCAACAGTCGAGACCAAAATGGTTGGACGGCGCTCCACAGAGCCGCCTTCAAAGGCCAAACCGACGCCGCCAGAACCCTGATCGACATCGGTATCGATATCGATGCTAAAGATGACGACGGTTACACTGCACTACACTGCGCCGTCGAGGCCGCTCACGACGAAGCAGTCCAGTTGCTGGTCGAGAGAGGCGCCGACGTCGAAGTGGTGACGAACAAAGGGTTGAGTGCAATGCAAATTGCCCAGTCGATGCAGTACTCGAGGATTATGAGGATTTTGATACAGGGCAGCGCGGGTAAAGACAAGGAGGTTCCGCCGCCGCAAACGGCGTCGTGGGGGTTGACGAAGAAGAAGCAACAGAGTAAGAGCAGAGGGAGAATTAGGGGTTTGCGGAGTACGGATTTTGATAAGTCAGTGGCATTGTCAGTGGTGTGA 1590 56.79 MDRLITVEPSSLIPIRIEPGQKCSGELTLRNVMYTMPVAFRLQPLIKARYTFKPQSGIIPPLATLTVEILYHLPPGFNLPDSFPYSDDSFLLHSVVVPGAAIRDSSSSFDSVPSDWFTTRKKQVFIDSGIKVMFVGSAVVARLVADGAMDQIREVLERSDPSWRAVDSVDEQGRTLLHLAIGQGRADLVQLLLEFNPDVGAVGQCGMTALETAAGAGQALIVELLLARKASTERGEGSVFGAVHLAAAGGHVEVLRLLLVKGACVDALSKDGDTALHLAVQERRRDCARLLLANGAKPDVRNAEQGDTALHMAARIGDEQIVKLLIQKGANKDIRNWAGKRPYDVAFDHSHTRLFDVLRLADKLATAARKGDVRSIQLLLDSGAAINSRDQNGWTALHRAAFKGQTDAARTLIDIGIDIDAKDDDGYTALHCAVEAAHDEAVQLLVERGADVEVVTNKGLSAMQIAQSMQYSRIMRILIQGSAGKDKEVPPPQTASWGLTKKKQQSKSRGRIRGLRSTDFDKSVALSVV 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30506252 30508844 - ClCG10G015950.1 Cla10g01521 283180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01521 529 ProSiteProfiles Ankyrin repeat profile. 172 204 IPR002110 GO:0005515
Cla10g01521 529 ProSiteProfiles Ankyrin repeat region circular profile. 172 199 - -
Cla10g01521 529 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 1 527 - -
Cla10g01521 529 Gene3D - 239 363 IPR036770 -
Cla10g01521 529 ProSiteProfiles Ankyrin repeat region circular profile. 305 336 - -
Cla10g01521 529 ProSiteProfiles Ankyrin repeat region circular profile. 271 302 - -
Cla10g01521 529 Pfam Ankyrin repeat 306 336 IPR002110 GO:0005515
Cla10g01521 529 Gene3D - 364 512 IPR036770 -
Cla10g01521 529 ProSiteProfiles Major sperm protein (MSP) domain profile. 4 135 IPR000535 -
Cla10g01521 529 ProSiteProfiles Ankyrin repeat profile. 425 457 IPR002110 GO:0005515
Cla10g01521 529 SUPERFAMILY Ankyrin repeat 166 487 IPR036770 -
Cla10g01521 529 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED 1 527 - -
Cla10g01521 529 Gene3D Immunoglobulins 1 132 IPR013783 -
Cla10g01521 529 SUPERFAMILY PapD-like 2 147 IPR008962 -
Cla10g01521 529 ProSiteProfiles Ankyrin repeat region circular profile. 242 267 - -
Cla10g01521 529 SMART ANK_2a 458 489 IPR002110 GO:0005515
Cla10g01521 529 SMART ANK_2a 425 454 IPR002110 GO:0005515
Cla10g01521 529 SMART ANK_2a 305 334 IPR002110 GO:0005515
Cla10g01521 529 SMART ANK_2a 172 201 IPR002110 GO:0005515
Cla10g01521 529 SMART ANK_2a 359 388 IPR002110 GO:0005515
Cla10g01521 529 SMART ANK_2a 238 267 IPR002110 GO:0005515
Cla10g01521 529 SMART ANK_2a 392 421 IPR002110 GO:0005515
Cla10g01521 529 SMART ANK_2a 205 234 IPR002110 GO:0005515
Cla10g01521 529 SMART ANK_2a 271 300 IPR002110 GO:0005515
Cla10g01521 529 ProSiteProfiles Ankyrin repeat region circular profile. 425 454 - -
Cla10g01521 529 Gene3D - 133 238 IPR036770 -
Cla10g01521 529 ProSiteProfiles Ankyrin repeat profile. 271 303 IPR002110 GO:0005515
Cla10g01521 529 ProSiteProfiles Ankyrin repeat profile. 392 424 IPR002110 GO:0005515
Cla10g01521 529 Pfam Ankyrin repeats (3 copies) 423 484 IPR002110 GO:0005515
Cla10g01521 529 Pfam Ankyrin repeats (3 copies) 156 231 IPR002110 GO:0005515
Cla10g01521 529 Pfam Ankyrin repeats (3 copies) 242 302 IPR002110 GO:0005515
Cla10g01521 529 ProSiteProfiles Ankyrin repeat profile. 305 337 IPR002110 GO:0005515
Cla10g01521 529 Pfam Ankyrin repeats (many copies) 366 413 IPR002110 GO:0005515
Cla10g01521 529 ProSiteProfiles Ankyrin repeat profile. 242 270 IPR002110 GO:0005515
Cla10g01521 529 PRINTS Ankyrin repeat signature 306 321 IPR002110 GO:0005515
Cla10g01521 529 PRINTS Ankyrin repeat signature 441 455 IPR002110 GO:0005515
Cla10g01521 529 MobiDBLite consensus disorder prediction 483 514 - -
Cla10g01521 529 ProSiteProfiles Ankyrin repeat profile. 364 391 IPR002110 GO:0005515
Cla10g01521 529 ProSiteProfiles Ankyrin repeat region circular profile. 392 424 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla04g00632 Cla10g01521 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00387 Cla-Chr2:3732695 Cla10g01521 Cla-Chr10:30506252 3.99E-07 dispersed
Cla08g01610 Cla-Chr8:28715998 Cla10g01521 Cla-Chr10:30506252 1.32E-07 dispersed
Cla09g00616 Cla-Chr9:5714288 Cla10g01521 Cla-Chr10:30506252 6.86E-09 dispersed
Cla10g01521 Cla-Chr10:30506252 Cla02g02011 Cla-Chr2:35094611 1.32E-06 dispersed
Cla10g01521 Cla-Chr10:30506252 Cla10g02003 Cla-Chr10:35856997 2.01E-16 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01521 - - bhj:120091736 951.429