Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01535 ATGGTTATGGCTACCGATTCCCAATTCCATGTTCTTGCCGTCGATGATAGCCTCATAGATAGAAAACTCATCGAAAGGCTTCTCAAAACCTCCTCCTATCAAGTTACTACGGTTGATTCTGGTAGCAAGGCCTTGGAATTTCTTGGTCTGATTCAAGAACATCAACATACAAACTTCAAATCCCCTTCTCCTTCTCCTTCTTTTTCCTCCTCCAACAATCATCACCAGGAAGTGGAAGTGAATCTTATCATCACTGATTACTGTATGCCTGGAATGACTGGCTTCGATTTGCTCAAGAAAGTTAAGATCTGGAAAAATCTGTTTTCCTCTGAATCATCGTCGCTTAGAAACATACCAGTGGTGATAATGTCATCGGAAAACGTACCTTCGAGAATCAGCAGATGTTTGGAAGAAGGCGCGGAAGAGTTCTTCCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCGCATATGATGAAGACGAAGTTGATGGAGGATCAAAATCAAGAAGAAGAAGAAACAACAGCAACAGAGATCGAATTGGAATCGGTAGAAAAAGAAGAAGAAGAGGAAGAGTTTGAGTTTGAGATGAGTAAGAAGAGAAAGGGAGGTGTGGATGAAGAAAGTGTGGAGACGGAGAGAAGAAGAAGAAGGTTCGACAACAATGGCGTCGCGACGGTGATTTGA 693 42.28 MVMATDSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIQEHQHTNFKSPSPSPSFSSSNNHHQEVEVNLIITDYCMPGMTGFDLLKKVKIWKNLFSSESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLCDVNKLKPHMMKTKLMEDQNQEEEETTATEIELESVEKEEEEEEFEFEMSKKRKGGVDEESVETERRRRRFDNNGVATVI 230
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 30671838 30673384 - ClCG10G016090.2 Cla10g01535 283194
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01535 230 MobiDBLite consensus disorder prediction 166 230 - -
Cla10g01535 230 SMART REC_2 9 156 IPR001789 GO:0000160
Cla10g01535 230 Gene3D - 10 224 - -
Cla10g01535 230 CDD REC_typeA_ARR 11 156 - -
Cla10g01535 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 220 IPR045279 GO:0009736
Cla10g01535 230 ProSiteProfiles Response regulatory domain profile. 10 161 IPR001789 GO:0000160
Cla10g01535 230 SUPERFAMILY CheY-like 8 174 IPR011006 -
Cla10g01535 230 MobiDBLite consensus disorder prediction 172 194 - -
Cla10g01535 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9 3 220 - -
Cla10g01535 230 MobiDBLite consensus disorder prediction 195 223 - -
Cla10g01535 230 Pfam Response regulator receiver domain 74 150 IPR001789 GO:0000160
Cla10g01535 230 Coils Coil 169 189 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cla04g00444 Cla10g01535 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00731 Cla-Chr1:8525172 Cla10g01535 Cla-Chr10:30671838 2.97E-72 dispersed
Cla04g00444 Cla-Chr4:16664904 Cla10g01535 Cla-Chr10:30671838 2.60E-75 dispersed
Cla05g02508 Cla-Chr5:36447145 Cla10g01535 Cla-Chr10:30671838 5.33E-42 dispersed
Cla05g02679 Cla-Chr5:37970439 Cla10g01535 Cla-Chr10:30671838 5.27E-36 dispersed
Cla07g00490 Cla-Chr7:6980106 Cla10g01535 Cla-Chr10:30671838 7.14E-51 dispersed
Cla08g00600 Cla-Chr8:17908808 Cla10g01535 Cla-Chr10:30671838 5.82E-50 dispersed
Cla10g01535 Cla-Chr10:30671838 Cla08g01708 Cla-Chr8:29657849 3.18E-13 dispersed
Cla10g01535 Cla-Chr10:30671838 Cla06g01631 Cla-Chr6:29836743 3.00E-45 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61910 PF00072 Response_reg 2.60E-10 CL0304 Cla TR
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01535 K14492 - csv:101220810 301.212