Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01559 ATGGGTTTGGAAATTGTGGATCCAAACACTTGCATCAGGGGCTGCTGCTCCAGCAAATCGATTCCTCTTCATCTTCAACCTTCCGCATTTACGTTGCTCTCCCCAATTGCCCGAGGGGCCGAGAGTATTGTGTATGAAGGAAGGTTGGATGGTAAAAAAGTTGCTGTAAAGAAGCCCACCTTGTCTACTTCTGAGGAATTGGACAAGTTTCATATGGAGCTCCAGTTGCTATGTGAATTAGATCATCCAGGCATAGTAAAACTGGTTGCAGCAAATGCGAAGCCACCTAACTACATGTTTTTCTTTGAATTCTACGAGTCTCCAAATCTTGCGGAGAAATTGCATGCCGAAGAATGGAATCCAAGTATCAATCAGGTGCTCATGATCACTATAGAGTTAGCAAAGGCTTTGCAGTATTTGCATAACTTGGGGATTGTTCATAGGGATGTGAAACCAGCAAATGTTCTTCTTGACAAAGATTTGCATCCGCACTTGGCTGATTTTGGTCTAGCAACACATCAGAAATACCTGAAAGAAATTTCTGCTGAAAATTGGAAGTCATCTGGCAAGCCAACAGGTGGTTTCTATAAGAAAAACATGGTTGGGACACTCATTTATATGGCCCCCGAGATATTGAGGAAGGAAATACATACAGACCTATCAGACGTCTATAGTTTTGGCATCCTAATGAATGAGCTTTTGACTGGTGTTGTTCCATATACGGATCTTCGTACTGAAGCACAGGCCCACACTGTATTGGAAATGAATTATACAGAGCAGCTGCTTACGGCAGCTATTGTTTCAGATGGCTTGCGGCCAGCTCTTCCTACTGATGAGTCTGGCACACCATCTAGGTTGTTATCACTTATACGGAGGTGCTGGGATGCAAATCCTAGAAATAGACCATCTTTTTCTGATATAGTTATGGACTTGGAATCAATTTGGGAGAATAGAAGGGGTCTAGAATCTGTCACCCCTATACAACCTGACTTGTGTGGTAGGCTTAGTGATGCTAATGAACATGATTACGTGTATCGAGAAGATATTAACTGGTCAAATCAGGGAGAACATTGTTCTCAAAAATTATCTGATGCAGATAGGTGTGCTTTGAATGAGTGGTTTGATTTCTCAACTGACCATTCAGCATACCGCCCAACACTTACTTACGGATCCTTCTCCACCTGTGGGAGGAGGGAGACCATGGAGGACTCTCATTTCCTTTTGCGTCACTTCTGCAGTGAAGAGGACATCCATGTCTTTGGGATCTTTGATGGTCATAGAGTTTACTTGTGCTGGAGAAGGAGATCAAGGTTGGAAGGAGATAATGATCTAGAAAACAGTTATAAGTATGTGCAGAGGGAAGTGGATGGAAATCAAACATTTGAGCAACCCATTAATGCGGGTGGTTGGGATAAAAGTTTCACAACAGGAATGGAAGGAATTAGGAAAAAGTTAGTTATTGCATGGATATCAAGGACATCCTTCTGGCTTTGCCATTCTGTTACCTTCTTACCAATTACTAATCACTTCAACGTATTGATAGTTTGTGAAATGCCTAATGCTATTGCTATAAAGCATGCAGGTGCAGCAGCTGCTGAGTTTTCAGCTCAAGCAATTCCTGGATTCTTGCGAACATCATTTTCCACAAGAAGTCCTGCAGATGCATTAACGGAAGCATTTGTAAAAACAGACATTGAGTTTAGAAAAGAACTCGAGTTCTTTCGCAAATCCAAGAAAGTTAAACAGAAAGATTGGCATCCTGGTTGCACTGCTGTTGTTGCTCTAGTTGTTAGAGACAGGCTTTTTGTTGCCAATGCTGGTGATTGCAGGACAATATTGTGTCGGGCTGGGAATCCCATTGTTTTAAGTAAGGATCATGTCGCTAGTTGTCTTGAGGAGAGAGAGCGTGTCATCAGTGCCGGAGGACAGGTCACTCGATCAATTGGCGACGATGATCTGAAGCCAGCCGTCACTGCAGAACCCGAGATAACGGAAACTGTTTTGACATCACAGGATGATTACCTGGTTATGGCTAGTGATGGATTGTGGGATGTCCTTAGCAACTCTGAGGTAGTTGGTATAATCAGGGACACTGTCAAAGATCCGGGAATGTGCTCGAAGCGACTTGCGACAGAAGCGGCAGCTCGGGGAAGCAACGATAACATCACGGTAGTTGTTGTATTTTTACATCCAGTATCTACAGTAGAGAGAATATATTAA 2220 42.93 MGLEIVDPNTCIRGCCSSKSIPLHLQPSAFTLLSPIARGAESIVYEGRLDGKKVAVKKPTLSTSEELDKFHMELQLLCELDHPGIVKLVAANAKPPNYMFFFEFYESPNLAEKLHAEEWNPSINQVLMITIELAKALQYLHNLGIVHRDVKPANVLLDKDLHPHLADFGLATHQKYLKEISAENWKSSGKPTGGFYKKNMVGTLIYMAPEILRKEIHTDLSDVYSFGILMNELLTGVVPYTDLRTEAQAHTVLEMNYTEQLLTAAIVSDGLRPALPTDESGTPSRLLSLIRRCWDANPRNRPSFSDIVMDLESIWENRRGLESVTPIQPDLCGRLSDANEHDYVYREDINWSNQGEHCSQKLSDADRCALNEWFDFSTDHSAYRPTLTYGSFSTCGRRETMEDSHFLLRHFCSEEDIHVFGIFDGHRVYLCWRRRSRLEGDNDLENSYKYVQREVDGNQTFEQPINAGGWDKSFTTGMEGIRKKLVIAWISRTSFWLCHSVTFLPITNHFNVLIVCEMPNAIAIKHAGAAAAEFSAQAIPGFLRTSFSTRSPADALTEAFVKTDIEFRKELEFFRKSKKVKQKDWHPGCTAVVALVVRDRLFVANAGDCRTILCRAGNPIVLSKDHVASCLEERERVISAGGQVTRSIGDDDLKPAVTAEPEITETVLTSQDDYLVMASDGLWDVLSNSEVVGIIRDTVKDPGMCSKRLATEAAARGSNDNITVVVVFLHPVSTVERIY 739
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30987786 30999181 - ClCG10G016330.2 Cla10g01559 283218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01559 739 Pfam Protein kinase domain 33 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01559 739 SUPERFAMILY PP2C-like 526 731 IPR036457 -
Cla10g01559 739 PANTHER - 525 739 - -
Cla10g01559 739 PANTHER - 1 427 - -
Cla10g01559 739 PANTHER PROTEIN PHOSPHATASE 2C 1 427 IPR015655 GO:0004722|GO:0006470
Cla10g01559 739 Gene3D - 526 734 IPR036457 -
Cla10g01559 739 PANTHER PROTEIN PHOSPHATASE 2C 525 739 IPR015655 GO:0004722|GO:0006470
Cla10g01559 739 Gene3D Transferase(Phosphotransferase) domain 1 17 327 - -
Cla10g01559 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Cla10g01559 739 Pfam Protein phosphatase 2C 522 722 IPR001932 -
Cla10g01559 739 SUPERFAMILY PP2C-like 380 427 IPR036457 -
Cla10g01559 739 Gene3D - 380 431 IPR036457 -
Cla10g01559 739 CDD PP2Cc 389 729 IPR001932 -
Cla10g01559 739 ProSiteProfiles Protein kinase domain profile. 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01559 739 SUPERFAMILY Protein kinase-like (PK-like) 24 330 IPR011009 -
Cla10g01559 739 SMART PP2C_4 378 727 IPR001932 -
Cla10g01559 739 SMART serkin_6 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01559 739 ProSiteProfiles PPM-type phosphatase domain profile. 388 729 IPR001932 -
Cla10g01559 739 SMART PP2C_SIG_2 510 729 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g01559 Cla-Chr10:30987786 Cla01g02105 Cla-Chr1:35335976 7.11E-39 dispersed
Cla10g01559 Cla-Chr10:30987786 Cla01g01294 Cla-Chr1:26249281 1.31E-38 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80873 PF00069 Pkinase 5.70E-47 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01559 - - csv:101217487 783.482