Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01560 ATGCCAAATCTGCTTATGGACATTGGATTAGTTGCAGTTGTATGGAAAAGTTTCTGCCCTCTGCTTGATTGCAATAATGCCAAATCTGCTGATGGACATCGGATTAGTTGCAGTTGTATGGGAACCCTGAGTCAAGGAACAGTCAAGTTTGTTTTCATTTTGAAGAGGAGGGACATTCCATGGGAGACATACATGACTACTAAACTTATCAGTGGAACAAGCCTTCAGCTGTTAAGGCGATATGATAACAGACCAGAGAGTTACAGGGCACAGTTGTTGGATGATGATGGTCCAGCATATGTTCGGGTATTTGTTAGCATTTTACGCGATATATTTAAGGAAGAAACAGTGGAATATGTTCTAGCATTAATCGATGAAATGCTTACAGCAAACCCAAAAAGAGCAAGATTGTTCCACGATCCTTCTCTTGCAAGCGAAGATGCTTATGAACCTTTCCTAAGATTGCTTTGGAAGGGAAATTGGTTCATACAGGAGAAGAGCTGTAAAATACTTGCTCTGATAGTGAGTGCTAGACAGAAAACTCATGATGGAAATTTTGCAAATGATGATGCCTTGAACTCCAAGAGCAAAATTACTACCATTGATGATGTTTTGGATGGACTGGTGAAATGGCTTTGTGCACAGCTGAAGAATCCTTCACATCCTAGTCGTGCTGTACAGACTTCTATCAATTGCCTTGCAACTCTGTTGAAAGAACCAAAGGTCAGATCCTCCTTCGTCCAGACAGATGGAGTGAAATTGCTTATTCCTTTGATTTCTCCTGCATCGACCCAACAATCTATTCAGCTTCTATATGAAACTTGTCTTTGTGTTTGGCTCTTATCATATTATGAGCCGGCAATTGAATTCTTGGCCACTTCTAGGACCCTTCCAAGACTCATCGATGTTGTCAAGAGTTCCACAAAAGAGAAGGTTGTCCGAGTTATTATTTTGACCTTGAGGAACTTACTCTACAAGGGGACATTTGGAGCTCAAATGGTGGGTCTTGGACTACCACAAGTTGTTCAAAGTTTGAAATCACAAGCCTGGAGTGATGAGGACCTTTTGGAGGCTTTGAATCAACTAGAAGAGGGGCTGAAAGAAAACATCAAGAAACTAAGTTCTTTCGACAAGTATAAGCAAGAAGTCCTTCTCGGGCATCTTGACTGGTCTCCCATGCACAAAGATGTAAATTTCTGGCGAGAAAATATTACAAGCTTCGAAGAGAACGACTTGAAGATATTGAGGGTCCTAATCACCATTCTGGACAGTTCCAGTGACCCAAGGGCTTTGGCAGTTGCTTGTTTTGATCTTTCACAGTTCATTCAACACCATCCAGCTGGGAGAGTTATAGTGACAGACCTCAAGGCCAAGGAAAGAGTGATGAAACTGATGAATCATGAGAATGCTGAGGTTACCAAATATGCCCTCCTTTGCATTCAAAGGCTCTTTCTAGGTGCCAAGTATGCTAGCTTTCTGCAGGCTTAA 1488 41.67 MPNLLMDIGLVAVVWKSFCPLLDCNNAKSADGHRISCSCMGTLSQGTVKFVFILKRRDIPWETYMTTKLISGTSLQLLRRYDNRPESYRAQLLDDDGPAYVRVFVSILRDIFKEETVEYVLALIDEMLTANPKRARLFHDPSLASEDAYEPFLRLLWKGNWFIQEKSCKILALIVSARQKTHDGNFANDDALNSKSKITTIDDVLDGLVKWLCAQLKNPSHPSRAVQTSINCLATLLKEPKVRSSFVQTDGVKLLIPLISPASTQQSIQLLYETCLCVWLLSYYEPAIEFLATSRTLPRLIDVVKSSTKEKVVRVIILTLRNLLYKGTFGAQMVGLGLPQVVQSLKSQAWSDEDLLEALNQLEEGLKENIKKLSSFDKYKQEVLLGHLDWSPMHKDVNFWRENITSFEENDLKILRVLITILDSSSDPRALAVACFDLSQFIQHHPAGRVIVTDLKAKERVMKLMNHENAEVTKYALLCIQRLFLGAKYASFLQA 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31003729 31010180 + ClCG10G016340.2 Cla10g01560 283219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01560 495 Pfam V-ATPase subunit H 55 366 IPR004908 GO:0000221|GO:0046961|GO:1902600
Cla10g01560 495 CDD VATPase_H 53 489 - -
Cla10g01560 495 SUPERFAMILY ARM repeat 54 485 IPR016024 -
Cla10g01560 495 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 441 448 IPR018506 GO:0020037
Cla10g01560 495 Pfam V-ATPase subunit H 372 484 IPR011987 GO:0000221|GO:1902600
Cla10g01560 495 Gene3D - 386 487 IPR038497 -
Cla10g01560 495 Gene3D - 53 374 IPR011989 -
Cla10g01560 495 PIRSF V-ATP_synth_H 51 494 IPR004908 GO:0000221|GO:0046961|GO:1902600
Cla10g01560 495 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 54 495 - -
Cla10g01560 495 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 54 495 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01560 K02144 - csv:101217015 855.129