Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01563 ATGGGATTCTTAGAATGTCTTGGCCATTTCTTTCAAAATGCAAATCCTTACATCGCAGTCATCTCCCTCCAATTCGGCTATGCCGGAATGAATATCATCTCCACCGTCTCCCTCAACCGGGGTATGAGCCACTACGTCCTCGTTGTCTACCGCCATGCCTTTGCCACCGCCGTCATGGCACCCTTTGCTCTTGTTCTCGAGAGGAAAGTAAGACCCAAGATTACATTTAAGATTTTCATTCAGATGTTTGTTCTTGCTCTACTTGGGCCACTGATTGATCAAAACTTCTACTATGTGGGGCTGAAAATGACATCCCCAACTTTCTCTTGTGCCATAAGCAACATGCTTCCTTCAATGACATTTGTGATGGCAGTCATTTGCAGGATGGAGAAGTTGGATTTGAAAAGAGTGAGATGCCAAGCAAAGTTGTTTGGAACAGTAATGACGGTAGTGGGAGCCATGTTGATGACATTTTACAAAGGAAGTGTCATCAAATTCTTCTGGACCGGGCACGGCCACCAACGGCACGCACCACCTACTGCAGATGCGGCAGCACTCAACCACCACAACGACGGAGAGTTCATCAAAGGCTCAATCTTGCTCATCATCGCCACTCTGGCTTGGGCAGCCTTCTTCATTCTCCAAGTCATAACTTTGAGAAAATACACCGCTCATCTTTCTCTCACCACTTTGGTTTGCTTTTTGGGAACCCTTCAGGCCATTGTTGTCACCCTTGCTATGGAGCACCACCCCTCTGCTTGGGCTATCGGCTGGGACTTGAACCTTCTTGCCGCCGCATATGCAGGGATTGTGACTTCAGGGGTGGCATATTATGTTCAAGGTTTGGTTATGAAGACAAAGGGGCCAGTTTTTGTAACAGCTTTTAGCCCTTTGATGATGGTGATTGTTGCTTTCATGGGATCTCTCATCTTGGCTGAAAAGATTTATGTTGGAGGGATAATTGGAGCAGTGTTGATTGTGATAGGGCTGTACTCTGTTTTGTGGGGAAAGTACAAAGAAAGCAAAGAGAAAGAAGATGAAGAGATTGTTGAATTAGCAATGAAAGGTGGAGATCAATTGCCTGTAATAAATGAAGGCATTGAAACAATTCAAAAGAAAGAGGGTTTGGCCATTACTATTCCACCCCAAGCTCATGGAGAAGAGGCTTCAAGACACTAA 1179 45.38 MGFLECLGHFFQNANPYIAVISLQFGYAGMNIISTVSLNRGMSHYVLVVYRHAFATAVMAPFALVLERKVRPKITFKIFIQMFVLALLGPLIDQNFYYVGLKMTSPTFSCAISNMLPSMTFVMAVICRMEKLDLKRVRCQAKLFGTVMTVVGAMLMTFYKGSVIKFFWTGHGHQRHAPPTADAAALNHHNDGEFIKGSILLIIATLAWAAFFILQVITLRKYTAHLSLTTLVCFLGTLQAIVVTLAMEHHPSAWAIGWDLNLLAAAYAGIVTSGVAYYVQGLVMKTKGPVFVTAFSPLMMVIVAFMGSLILAEKIYVGGIIGAVLIVIGLYSVLWGKYKESKEKEDEEIVELAMKGGDQLPVINEGIETIQKKEGLAITIPPQAHGEEASRH 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31033344 31035953 - ClCG10G016370.1 Cla10g01563 283222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01563 392 PANTHER WAT1-RELATED PROTEIN 11 366 IPR030184 GO:0016021|GO:0022857
Cla10g01563 392 PANTHER WAT1-RELATED PROTEIN 11 366 - -
Cla10g01563 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 338 - -
Cla10g01563 392 Pfam EamA-like transporter family 18 157 IPR000620 GO:0016020|GO:0016021
Cla10g01563 392 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020|GO:0016021
Cla10g01563 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla04g00594 Cla10g01563 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01961 Cla-Chr9:37221332 Cla10g01563 Cla-Chr10:31033344 2.18E-109 dispersed
Cla10g01563 Cla-Chr10:31033344 Cla11g01531 Cla-Chr11:28947910 2.58E-115 dispersed
Cla10g01562 Cla-Chr10:31028582 Cla10g01563 Cla-Chr10:31033344 4.70E-34 tandem
Cla01g01070 Cla-Chr1:16934707 Cla10g01563 Cla-Chr10:31033344 2.09E-71 transposed
Cla11g01284 Cla-Chr11:26371717 Cla10g01563 Cla-Chr10:31033344 1.36E-167 transposed
Cla10g01563 Cla-Chr10:31033344 Cla04g00594 Cla-Chr4:19981693 1.44E-162 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01563 - - bhj:120090189 682.945