Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01564 ATGGATATCTTTATTCCGGCGACTTTCTTCCTCACTTTCCTGATCTCTCTTTTCCTTTTCCTTTACTTCTTATCTTCAACGAAGAAATCTCAAAGCCATGAAGGTTTTAAAAACTACCCCATCGTCGGAGTATTGCCCCTGTTCTTATTAAACCGCCACCGTTTTCTGGACTGGACGACGGAGGTCCTCCGCAATTGCAAGACCAACACAGCGGTGATCCGGCGGCCAGGTGACGTCTGTGGCGTTATGACGGCAAACCCACTTGTGGTAGAGCACATTCTGAAGACCCAATTTAAGAATTACCCAAAAGGGGAACGTTTGGTTTCGATTTTGGAGGATTTTTTGGGGAGTGGGATTTTCAATTCTGACGGCGAAATTTGGAGATTTCAAAGGAAAATGGTGAGTTATGAGTTCAATACGAAATCGCTGAGGAATTTTGTTATGGAGAATGTTAAAGTTGAGATACAGAGGAAGTTGATTCCTGTTTTGGAGAAGGCGGCTTCGTCGTCTGAAACAGAGTGTGTTTTGGATTTGCAAAATGTTTTTGAGCGATTTGCGTTTGATAATGTTTGTAAATTGTCTTTCAATTTTGATTCCGGTTGTCTCGGCGGCGAGGATAACGCCGGCGCCGACTTCATGCGCGCTTTTGAGACCGACGCCACCCTCACATCCGGCAGGTTTTGTTCATTTCTCTTGTCACCATCTATCTTTTTCCGGCCTGTGAAGAGATTTTTCAACTTGGGATCAGAAAGAAACCTAAAGAAATCCATATCAATTGTTCACAAATTTGCAGATGAAATCATACGCTCAAGAATGGAAGAGAAAACAACCCAAAATAAGGATCAAGATTTATTGTCACGATTCATGGCAAACGAAGATAATTCCCCAAAATTCCTCCGAGACATAATCATAAGCTTTATCCTCGCCGGTGGAGACACCACTTCTTCAGCTCTAACATGGTTCTTTTGGATCTTATCCACCCGACCTGATATCGAACAAAACATCCTTGCAGAGCTTGAAAAAATAAGATCAAGAACACGTAAGGAAATCGGAGAAATGTATAGCTTCGACGAACTCCAAGACATGCACTATCTTCAAGCAGCATTGTCCGAGACTCTCCGGTTATACCCCCCAGTCCCGATTGACTCAAAAGCTTGCCAACGTGACGATATCTTACCCGACGGGACGTTTATTAGGAAGAGTTGGTTTGTGATGTACCATGCATATGCAATGGGAAGAATGAAGAGCAAATGGGGGGAAAATTGTGAGGAAGTTTTGCCAGAAAGGTGGTTAGAAAATGGGGTTTGTAGGATTGAGAGTCCATTTCAGTTTCCTATATTTCATGGAGGGCCAAGGATGTGTCCAGGAAAAGATATGGCTTATATTCAGATGAAGTCCATAGTTGCAGCTGTGATCCAGAAGTTTGAAGTAAAAATGGTAGAAAAGAAGACTCCAAAGCATTTGTTATCACTGACATTAAGGATGGAGAATGGTTTGCAAGTGATGGTCAAAAAGAGGCCCATATATAACGTAAATTAG 1539 42.43 MDIFIPATFFLTFLISLFLFLYFLSSTKKSQSHEGFKNYPIVGVLPLFLLNRHRFLDWTTEVLRNCKTNTAVIRRPGDVCGVMTANPLVVEHILKTQFKNYPKGERLVSILEDFLGSGIFNSDGEIWRFQRKMVSYEFNTKSLRNFVMENVKVEIQRKLIPVLEKAASSSETECVLDLQNVFERFAFDNVCKLSFNFDSGCLGGEDNAGADFMRAFETDATLTSGRFCSFLLSPSIFFRPVKRFFNLGSERNLKKSISIVHKFADEIIRSRMEEKTTQNKDQDLLSRFMANEDNSPKFLRDIIISFILAGGDTTSSALTWFFWILSTRPDIEQNILAELEKIRSRTRKEIGEMYSFDELQDMHYLQAALSETLRLYPPVPIDSKACQRDDILPDGTFIRKSWFVMYHAYAMGRMKSKWGENCEEVLPERWLENGVCRIESPFQFPIFHGGPRMCPGKDMAYIQMKSIVAAVIQKFEVKMVEKKTPKHLLSLTLRMENGLQVMVKKRPIYNVN 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31054716 31057343 + ClCG10G016380.2 Cla10g01564 283223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01564 512 SUPERFAMILY Cytochrome P450 36 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01564 512 PANTHER CYTOCHROME P450 24 504 - -
Cla10g01564 512 Pfam Cytochrome P450 81 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01564 512 Coils Coil 511 512 - -
Cla10g01564 512 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01564 512 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01564 512 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01564 512 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01564 512 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01564 512 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01564 512 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01564 512 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01564 512 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01564 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Cla10g01564 512 Gene3D Cytochrome P450 17 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01564 512 PANTHER CYTOCHROME P450 94B3-LIKE 24 504 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g00658 Cla-Chr6:8173802 Cla10g01564 Cla-Chr10:31054716 0 dispersed
Cla10g01564 Cla-Chr10:31054716 Cla10g01816 Cla-Chr10:34064859 6.45E-125 dispersed
Cla10g01564 Cla-Chr10:31054716 Cla10g01565 Cla-Chr10:31060071 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01564 - - cmax:111482283 738.028