Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01565 ATGGATATCTCTGTTCTATCTGTTCTAACACTAACACCCTTCATTTTCCTCACTTTTCTTTCTCTTTCCCTTTACCTTCTCTTCTTCACTTCACCAAACACCAAATCCAAACCCCACCAAGGTTTCAAACACTTCCCCCTCGTCGGAACCTTGCCGCTCTTCTTATTAAACCGCCACCGTTTTCTTGACTGGTCTACTGAGGTTCTCAAAAGCTGCCGGACGAACACGGCGGTGTTCAAGCGGCCAGGGAAAGTCCACGGCGTAATCACCGCGAACCCACTTGTGGTTGAGCATATACTGAAGACCCAATTTGAGAATTACCCAAAAGGGGAAAGATTCATTTCGCTTTTGGAAGATTTCTTGGGGCGAGGAATTTTCAATTCCGACGGCGAAATTTGGAAAGTGCAGAGGAAAACGGCGAGTTATGAATTCAATACGAAATCGTTAAGGAATTTTGTTATGGAGAATGTTAGAGTTGAGGTTCAGAGTAGGCTGTTGCCTATATTTGGAAAAGCTTGTGAAACGGAGCGGATTTTGGATCTACAGGACGTTTTGGAACGGTTTGCGTTTGATAATGTTTGTAAATTGGCTTTTAATTATGATCCTGCTTGTCTCGGCGGCGATGGCACCGCCGCCGCCGAGTTCATGCGCGCTTTTGAGGACGCCGCCACTCTCAGCTCCGGCAGATTCATGTATGCTTTCCCAGGTTTGTACAAAGTGAAGAAATTTTTAAACATAGGATCAGAAAGAAGCCTGAAGGAAGCAATAGCCATAGTTCACAAATTTGCAGATGACATCATCTCCTCAAGAATGGAAGAGAAGAAGAGAACCCAAATAGAAAAAGATCAAGATTTATTATCTCGATTCATGGGAGACGAAAACAATTCTCCAGAATTCCTTCGAGACATAATCATAAGTTTCATCCTTGCGGGGCGAGACACTACTTCTTCAGCTCTAACATGGTTTTTCTGGATTTTATCGTCACGACCCGATGTTGAACAAAAAATCCTAACAGAACTCCAAACAATCCGATCAAGAACACATAAGGAAATCGGAGAAATGTATGGCTTCGACCAACTTCGAGATATGCAGTATCTACAAGCAGCATTATCCGAGACACTCCGCCTATATCCACCGGTGCCAGTGGATACAAAAGCTTGTCGAAACGATGACGTCTTACCCGATGGGACGTTTATCGGGAAGAGTTGGTTCGTGACGTACCATACATATGCAATGGGGAGAATGGAGAGCATATGGGGGAAGAATTATGGAGAATTTTCACCGGAAAGGTGGCTACAGAATGGGGTTTGTAAGACGGAGAGTCCGTTTCGTTTCCCGATATTTCACGCGGGACCGAGGATGTGTTTAGGAAAGGACATGGCTTATATTCAGATGAAGTCCATAGCTGCAGCTGTGATTGAGAAGTTTGAAGTGGAAATGGTGGAGAAGAAGAAAACTCCAAAGCATTTGTTGTCTTTAACATTGAGGATGGAGAATGGGTTACAAGTGATGGTCAAAAAGAGAGATAGGAGTATGCCCATTTGA 1545 43.95 MDISVLSVLTLTPFIFLTFLSLSLYLLFFTSPNTKSKPHQGFKHFPLVGTLPLFLLNRHRFLDWSTEVLKSCRTNTAVFKRPGKVHGVITANPLVVEHILKTQFENYPKGERFISLLEDFLGRGIFNSDGEIWKVQRKTASYEFNTKSLRNFVMENVRVEVQSRLLPIFGKACETERILDLQDVLERFAFDNVCKLAFNYDPACLGGDGTAAAEFMRAFEDAATLSSGRFMYAFPGLYKVKKFLNIGSERSLKEAIAIVHKFADDIISSRMEEKKRTQIEKDQDLLSRFMGDENNSPEFLRDIIISFILAGRDTTSSALTWFFWILSSRPDVEQKILTELQTIRSRTHKEIGEMYGFDQLRDMQYLQAALSETLRLYPPVPVDTKACRNDDVLPDGTFIGKSWFVTYHTYAMGRMESIWGKNYGEFSPERWLQNGVCKTESPFRFPIFHAGPRMCLGKDMAYIQMKSIAAAVIEKFEVEMVEKKKTPKHLLSLTLRMENGLQVMVKKRDRSMPI 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31060071 31062003 + ClCG10G016390.2 Cla10g01565 283224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01565 514 PANTHER CYTOCHROME P450 20 506 - -
Cla10g01565 514 SUPERFAMILY Cytochrome P450 38 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01565 514 Gene3D Cytochrome P450 29 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01565 514 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01565 514 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01565 514 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01565 514 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01565 514 PANTHER CYTOCHROME P450 94B3-LIKE 20 506 - -
Cla10g01565 514 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01565 514 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01565 514 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01565 514 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01565 514 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01565 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Cla10g01565 514 Pfam Cytochrome P450 81 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g01736 Cla-Chr6:30917302 Cla10g01565 Cla-Chr10:31060071 1.10E-142 dispersed
Cla07g00067 Cla-Chr7:791984 Cla10g01565 Cla-Chr10:31060071 2.39E-152 dispersed
Cla10g01144 Cla-Chr10:25950852 Cla10g01565 Cla-Chr10:31060071 2.55E-129 dispersed
Cla10g01565 Cla-Chr10:31060071 Cla10g01816 Cla-Chr10:34064859 3.49E-134 dispersed
Cla10g01564 Cla-Chr10:31054716 Cla10g01565 Cla-Chr10:31060071 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01565 - - csv:101211731 907.901