Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01668 ATGGTCGCAGTAGAAGAAGTTCCTATTCTCTCCAAATTGAGGTTCGAAAGAGTAAACTTTCTCTGCTTCATTCTCTCTCTCGCCATGGAAATCGACTCACTGAAGAATCTCCAGCGCAAGCAGTGTACCTATGAAATATTGGATGAGCAGTACAAGATTCAGAAGGAGACATACAGGGGCCAGCAATACAGTCACATTTACTTTGCTCGACTCCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAAGTGGAAACCAAATTTACCTGTTTGCACTGTATTGGGATTAGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCGCCTACAAGCACATGAAACTTAAACCCACCATTCTGGACGAGTATTCAAAGGAGAGATCTGCCACCCCCCTTGTTAAGCCACACAACTTTATGCACCCAGATGATCATCTAGTATTGGAAGATGAAAGTGGGAGAGTAAAGCTTTCTGGGGATGTGCTTTTACCTTCTGTATATGTTACAGGGATTGTCCTTGCATTGCATGGAAAGGAAACTTGCGTTGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGGCTTGCCACCCCAGATAGAGCGGCCGCTCATATCAAGCGAAGATAAGTACGTGATTTTTGTGTCGGGCCTAAGTATTGGGAGTAGCATCTCTAATCCTCTACAGTTTCAGCTTCTTGTTGATCATATAACAGGACATTTAGGGGACGAGAAGGAACAAGGGATTGCGGCTCAAATAGTTAATGTTGTCATTTGTGGGAATTCAGTTGAAATTCCTCGAGGAATTTTAAATGGGCAGATAAGAATAAGGGAAAATTTAGAACTCTCCCAGTATACAATTATTTTGTCTGCAAACTCTAGTAATGCCAGTGATGCTAGGCTTTTTGTTGATGCATGCATGATGTATTTTCTGCAGCATTTGTCTGCGAAGGACCAAACAAAGCTGATGGAACCACTTAAAGAGCTAGATATCCTATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCGGGGTCCAGTGACCCAGCCAATTTTTCCTTGCCTCAGCAGGTCTTTCTTTACAGCCGGAACTCCCGCTGTTCATCCCTGCCTTTACACAGATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTCAGATCTTGCACTAACCCTCATTGTTTTGAGCTTGATAATTTCAGGCAAGTCAATAATGTCAGCCTGATAGAGTTTCTTGGAACATCAGGACAGAATGTAGATGATCTCGAGAAGTACTCAGAGGCTAAAGATAAACTTGAATTTATGGAGAGGACTTTGAGATGGAGGCATCTGGCACCAACTGCTCCAAATACTCTTGGTACAAGTCACTTGGTGGATATGCCATTGAAACAATCCCTTCCCGATTCAAAGCCTGCATCGGACGATCTTACAGGTTGCTACCCATTCACTGATCGGGATCCTTTCCTAATTGAGAGCTGTCCTCATGTTTATTTTATTGGCAATCAGGACAATTTTGATACTCGCTTAATAAAGGGAGCTGAAGGGCAGATGGTAAGACTCATTGCAATTCCAAGATTTTGCGAGAAGGGGGTTGCCGTAGTGTTTGGGTTGATTTCTTGTGCGTTTACACCCCTAGATCAAAGTTTCATCAGCTGTCAAAACTCAAAGCATCTTAACTTGAGAAACCTTGAATGCCACACACTGAGTTTTGGGACTGAATTAAGCTGA 1728 42.94 MVAVEEVPILSKLRFERVNFLCFILSLAMEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPNLPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLEDESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVNVVICGNSVEIPRGILNGQIRIRENLELSQYTIILSANSSNASDARLFVDACMMYFLQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQVFLYSRNSRCSSLPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRQVNNVSLIEFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGTSHLVDMPLKQSLPDSKPASDDLTGCYPFTDRDPFLIESCPHVYFIGNQDNFDTRLIKGAEGQMVRLIAIPRFCEKGVAVVFGLISCAFTPLDQSFISCQNSKHLNLRNLECHTLSFGTELS 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 32397683 32404934 + ClCG10G017520.2 Cla10g01668 283327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01668 575 CDD MPP_PolD2_C 209 570 IPR041863 -
Cla10g01668 575 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 471 570 IPR024826 -
Cla10g01668 575 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 35 454 IPR024826 -
Cla10g01668 575 Gene3D - 68 192 - -
Cla10g01668 575 Pfam DNA polymerase alpha/epsilon subunit B 210 506 IPR007185 GO:0003677|GO:0006260
Cla10g01668 575 Pfam DNA polymerase delta subunit OB-fold domain 62 189 IPR040663 -
Cla10g01668 575 Gene3D - 197 557 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01668 K02328 - csv:101221438 785.023