Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01669 ATGGATTCTTCAATTGGCAATGTTCAGCTTGTTCCCAGAAAGTCCTCCGACGAGCTTTTGAGGAAATTTGCTGAGGTGGGATCGGAGTCCGGCGGCGGAAGGAGGCTGTTGACGGTGGTTAAGAGACGGCGGAAGAGGGTTAATGAGGAGTGCGATAGCCCCTCCGGCGGCGGAGTGGTGGAGCGGAAATGGCTGATTTCGCCGGTGGGGAGGAAGTCGGTTGTGTTGAAGAAAGTTGGGATTGGAAATGGAAGGTCTCAGCAGCTGAGGATTAGAGATTTTAGAAACAAATCTATTCTTGGAGCCATTCAAAAGGGGGGGTGTCTTGAATTTGATTCGTTTTTGTTCAATTGTTCCCTCTTTGAGAAAGTGGGTATTGGGGCTTTGTTGCAGAGGGAAATGAGGGATGTTTTCGTGGCTGGCAAGGATGGCGTCGGCTTGTTGGAAACCAGTGAGGCGGCTAATGAGGTAATTGAGGATAATAGTCAGGTTGAGACTGGCCCAGATGCCACTTTCGTCGGCGTTTATGATGGCCATGGTGGCCCTGATGCTTCTCGCTTTATCTGTGATCATCTTTTCAGGAATCTAATGAAGACTTGTTCTGAACTTTCTTGGATTCTTGTTTTGATTCTGAAATCTACATGTACTTGTTGCCTTGGACTCTTGTTTGGATTTCCTGTTCCATTAGAGATTGACCTTGTGAAATCTGTTGATTATACGTGGTCCATCTTTTTTTGCTCTCTTGGGCTTGCTCAAGAGAATGGAAATATAACTGAAGATATCCTTCGAAGTGCATTTTCTGCAACTGAGGAAGGGTTTCTTACTCTTGTTCGTCGGTCATGGGGAATAAAGCCAACAATTGCAGCTATGGGATCTTGTTGCCTGGTGGGAGTTATCTGGAGAGGTACATTATACGTCGGTAACGTCGGTGATTCCCGGGCTGTTATTGGTTCTTTAGGTAAATCTAATAAGATAGTTGCAGAACAGTTGACAAGGGATCATAATGCAAGTATCGAGGAGGTTAGACAAGAACTCAGGTCCTTGCATCCTGATGACTCACATATCGTTGTTATGAAGCACGGAGTCTGGCGTATTAAAGGCATTATTCAGGTTTCCAGATCGATAGGTGATGCATATTTAAAAAAGCCAGAGTTTTCTCTTGATCCATCCTTTCCACGGTTCCACCTTGCGGAGCCTCTTCGACGGCCTGTTCTTACTGCGGAACCATCGTTAAGTACAAGAGTTCTACAACCTAATGACAAATTTCTCATATTTGCATCTGATGGCCTATGGGAGCATCTAACGAATCAACAAGCTGTCGAGATTGTGTATAATAACCCAAGAGCAGGAATTGCAAAAAGACTTGTTAAAACAGCGCTAACTGAGGCTGCAAGGAAGAGGGAAATGAGATATGATGATCTGAAGAAGCTCGAAAAGGGCATACGACGGTTTTTTCATGATGATATCACAGTTGTTGTCATCTTTCTGGACTATGAGTTGCAAGGGAAGAAGGCACGTGTGCCAGAATTATCTGTTCGTGGGTTTACTGATACCGTTGGACCGTCAAATTTCAATGTTCTTCGAGGCATTGATGAGAATGGAAAGTCTGTTGGGTGA 1617 44.84 MDSSIGNVQLVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNEECDSPSGGGVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKGGCLEFDSFLFNCSLFEKVGIGALLQREMRDVFVAGKDGVGLLETSEAANEVIEDNSQVETGPDATFVGVYDGHGGPDASRFICDHLFRNLMKTCSELSWILVLILKSTCTCCLGLLFGFPVPLEIDLVKSVDYTWSIFFCSLGLAQENGNITEDILRSAFSATEEGFLTLVRRSWGIKPTIAAMGSCCLVGVIWRGTLYVGNVGDSRAVIGSLGKSNKIVAEQLTRDHNASIEEVRQELRSLHPDDSHIVVMKHGVWRIKGIIQVSRSIGDAYLKKPEFSLDPSFPRFHLAEPLRRPVLTAEPSLSTRVLQPNDKFLIFASDGLWEHLTNQQAVEIVYNNPRAGIAKRLVKTALTEAARKREMRYDDLKKLEKGIRRFFHDDITVVVIFLDYELQGKKARVPELSVRGFTDTVGPSNFNVLRGIDENGKSVG 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 32406360 32417484 + ClCG10G017530.2 Cla10g01669 283328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01669 538 PANTHER PROTEIN PHOSPHATASE 2C 43-RELATED 249 521 - -
Cla10g01669 538 SMART PP2C_4 118 494 IPR001932 -
Cla10g01669 538 Gene3D - 145 506 IPR036457 -
Cla10g01669 538 CDD PP2Cc 155 496 IPR001932 -
Cla10g01669 538 Pfam Protein phosphatase 2C 258 464 IPR001932 -
Cla10g01669 538 SUPERFAMILY PP2C-like 155 497 IPR036457 -
Cla10g01669 538 PANTHER PROTEIN PHOSPHATASE 2C 43-RELATED 150 204 - -
Cla10g01669 538 ProSitePatterns PPM-type phosphatase domain signature. 172 180 IPR000222 GO:0043169
Cla10g01669 538 PANTHER ALPHABET, ISOFORM E-RELATED 150 204 - -
Cla10g01669 538 PANTHER ALPHABET, ISOFORM E-RELATED 249 521 - -
Cla10g01669 538 ProSiteProfiles PPM-type phosphatase domain profile. 144 496 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g01669 Cla-Chr10:32406360 Cla10g01967 Cla-Chr10:35506658 1.51E-121 dispersed
Cla10g01669 Cla-Chr10:32406360 Cla02g01181 Cla-Chr2:25301031 4.52E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01669 K01102 - csv:101222146 630.172