Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01741 ATGGCGACTTACCTTCATGGAAATTCTGATCAATTCCAATCTTCTGATGGTGGCCTTCAAACCCTTGTCTTAATGAATCCAAGCTATGTTCAATTCTCAGACACGCCGCCGCCGCCGCCTCCGTCCCACCCTAATCTCGTCTTCTTCAATTCTCCTTCTACGGCTGCTAATTCCTATACTACACTCACACAAGCGCCCCCGTCTTCTCACACTCAACAATTCGTTGGAATTCCGTTGCAGACGACTGCCGCTTCCCCGACGTCACAAGACCATAGTTCGCATCCTTTGAATCCCCACCATGATATCTCTGCCTTGCACGGCTTTGCTCCACGCCTTCACCATAACATTTGGAACCAAATTGACCCATCCACGGCCGCGCGTGAGTCTGCACGTGCTCAGCAGGGCTTGTCCTTGAGCCTTTCTTCGCAGCACCAGCAAGGTTTTGGGTCGAGAGACGTTCAATCTCAGACCCAACAGGCGGCGTCTGGCGAGGAGAACATGCGGATCTCCGGTGGATCGAGTTCTTCGGCTTCTGGTGTCACTAACGGCGTTGCTGGAATTCAGGGCGTTTTAATTAGCTCCAAATATCTTAAGGCTGCGCAAGAACTTCTAGATGAGGTTGTTAATGTCACCCAAAACGGAATTAAAAGTGAATCATCTCCAAAGAAGGCCACCGGAAATCAATCGAAGATGATCGGAGATGCTCCCGCTGCCACCGGAACTGCAGACGGTTCTTTAGAAGGAGAAACCGACGGTAAACGGGCCGCGGAGCTTACAACCACCGAGAGACAAGAAATTCAGATGAAGAAAGCAAAGCTTATAAGCATGCTTGACGAGGTGGAGCAAAGGTACAGACAGTACCACCACCAGATGCAGATAGTGATATCCTCATTCGAGCAGGCGGCCGGAGCCGGTTCGGCGAGAACCTACACCGCCCTTGCACTTCAGACGATTTCGAAGCAATTCCGTTGCTTAAAAGACGCAATCACCGGCCAAATCCGAGCGGCGAACAAGAGTTTGGGTGAAGAAGAATGTATCGGAAGAAAAATGGAAGGTTCCCGGTTGAAATTCGTCGATAACCATCTCCGGCAACAACGAGCTCTGCAACAATTGGGCATGATCCAACACAATGCTTGGAGACCTCAGAGGGGCTTACCGGAGAGATCGGTATCGATTCTTCGGGCTTGGCTTTTCGAACACTTCCTCCATCCTTACCCTAAGGATTCAGATAAACACATGCTCGCTAAGCAAACAGGGCTCACCAGAAGCCAGGTTTCGAATTGGTTTATAAACGCGAGAGTTCGACTGTGGAAGCCAATGGTGGAAGAGATGTACATGGAGGAAATCAAAGAGCAAGAACAGAACGGCAGCGGATCGACACCGGCGACGGAAAAAAGCAACGACGATTCAGTTTCGAAATCCATAGCTCCACCACCAGAGACAAAAAGCCCCAATTCAAAACAAGAGGAAAAAAGCCCAAATCCAAACCAAAACGTGCATCCTTCAATCTCAATCTCAAATTCCTCCGGCGGAAATGTTCGAAACCCATCTGGATTTACACTCATCGGAGCCTCATCGGAGCTCGACGGAATCACACGAGGAAGCCCTAAAAAACAGAGAGGCCCAGAAATCCTTCATTCCTCAAATAACAACGTCCCTTTCATAAACATGGACATCAAACCCCGAGAAGAAGAAGAACATCAAAATCACAATCACAATCACAATCCCCATCATAATCATCATCTTCCAATGAAATTCGACGACGAGAGACAAAACAGAGATGGGTATTCATTTCTAGGCCAACCCCATTTCAACATCGGCGGATTCGCCCAATACCCAATCGGCGAAATCGCCAGATTCGACGCCGATCAGTTTACTCCAAGATTCTCCGGCAATAATGGTGTCTCTTTGACGTTAGGCCTTCCCCATTGTGAAAATCTCTCGTTAAACGCAGCTACCCACCAAAGCTTTCTCCCAAACCAGAGCATCCATTTAGGAAGAAGAACAGAAATTGGAAAACCCACTGATTTTTCCGCCATTAACGCCTCTACAGCTCATTCTTCCACTGCTTTTGAGACCATCAACATCCAAAATGGAAAAAGGTTCGCTGCTCAATTACTGCCAGACTTTGTGGCCTAA 2139 48.43 MATYLHGNSDQFQSSDGGLQTLVLMNPSYVQFSDTPPPPPPSHPNLVFFNSPSTAANSYTTLTQAPPSSHTQQFVGIPLQTTAASPTSQDHSSHPLNPHHDISALHGFAPRLHHNIWNQIDPSTAARESARAQQGLSLSLSSQHQQGFGSRDVQSQTQQAASGEENMRISGGSSSSASGVTNGVAGIQGVLISSKYLKAAQELLDEVVNVTQNGIKSESSPKKATGNQSKMIGDAPAATGTADGSLEGETDGKRAAELTTTERQEIQMKKAKLISMLDEVEQRYRQYHHQMQIVISSFEQAAGAGSARTYTALALQTISKQFRCLKDAITGQIRAANKSLGEEECIGRKMEGSRLKFVDNHLRQQRALQQLGMIQHNAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEIKEQEQNGSGSTPATEKSNDDSVSKSIAPPPETKSPNSKQEEKSPNPNQNVHPSISISNSSGGNVRNPSGFTLIGASSELDGITRGSPKKQRGPEILHSSNNNVPFINMDIKPREEEEHQNHNHNHNPHHNHHLPMKFDDERQNRDGYSFLGQPHFNIGGFAQYPIGEIARFDADQFTPRFSGNNGVSLTLGLPHCENLSLNAATHQSFLPNQSIHLGRRTEIGKPTDFSAINASTAHSSTAFETINIQNGKRFAAQLLPDFVA 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 33296516 33300413 - ClCG10G018320.1 Cla10g01741 283400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01741 712 Pfam Associated with HOX 190 330 IPR006563 -
Cla10g01741 712 ProSiteProfiles 'Homeobox' domain profile. 376 439 IPR001356 GO:0003677
Cla10g01741 712 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 10 665 - -
Cla10g01741 712 Coils Coil 263 283 - -
Cla10g01741 712 MobiDBLite consensus disorder prediction 214 252 - -
Cla10g01741 712 MobiDBLite consensus disorder prediction 82 102 - -
Cla10g01741 712 SUPERFAMILY Homeodomain-like 380 446 IPR009057 -
Cla10g01741 712 Pfam Homeobox KN domain 396 435 IPR008422 GO:0003677|GO:0006355
Cla10g01741 712 SMART prehox3 185 331 IPR006563 -
Cla10g01741 712 Gene3D - 374 453 - -
Cla10g01741 712 CDD homeodomain 379 440 IPR001356 GO:0003677
Cla10g01741 712 MobiDBLite consensus disorder prediction 452 522 - -
Cla10g01741 712 MobiDBLite consensus disorder prediction 450 554 - -
Cla10g01741 712 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 10 665 - -
Cla10g01741 712 SMART HOX_1 379 443 IPR001356 GO:0003677
Cla10g01741 712 MobiDBLite consensus disorder prediction 124 179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01594 Cla-Chr1:30651707 Cla10g01741 Cla-Chr10:33296516 4.54E-85 dispersed
Cla02g01273 Cla-Chr2:26728274 Cla10g01741 Cla-Chr10:33296516 5.86E-79 dispersed
Cla04g00762 Cla-Chr4:22705788 Cla10g01741 Cla-Chr10:33296516 1.57E-58 dispersed
Cla10g01741 Cla-Chr10:33296516 Cla11g00386 Cla-Chr11:4333548 1.78E-101 dispersed
Cla03g00278 Cla-Chr3:3372212 Cla10g01741 Cla-Chr10:33296516 1.41E-70 transposed
Cla08g01664 Cla-Chr8:29284914 Cla10g01741 Cla-Chr10:33296516 4.53E-50 transposed
Cla09g00248 Cla-Chr9:2482644 Cla10g01741 Cla-Chr10:33296516 2.47E-85 transposed
Cla10g01741 Cla-Chr10:33296516 Cla02g02176 Cla-Chr2:36850444 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61936 PF07526 POX 1.30E-49 No_clan Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01741 - - csv:101208201 1258.43