Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g01776 | ATGTCCATAAACCACTTCTCTCCTGGCTTCCATCGACCACTCTTCTCTACTCCCCAACTCCCCATCATGCTTAACCCCAAATCATCCCTCTCCGTCGCCGCCGCCGCCGACCTCCTCCCCATGTTCGAAAAACCCTTAACCCCCAGCGACGTTGGCAAGCTCAACCGTCTCGTCATCCCCAAGCAATACGCCGAAAAATACTTCCCCCTCTCCCCCTCCGCCGCGGTTGCCGCCGCCGGCGACTCTGCCGACAAGGGGTTACTCCTCAGCTTCGAAGATGAGTCCGGCAAGATATGGCGGTTCCGTTACTCTTATTGGAATAGTAGTCAGAGCTATGTGCTAACGAAGGGGTGGAGCCGGTTTGTGAAAGAGAAGCGCCTTGACGCCGGTGATGTCGTCGTTTTTGAACGCCACCGGCGTGATGGTGATAGGTTGTTCATTGGGTGGAAGAGGAGGTCGGCGCCGTCTCCGGCGGACACTGCCGTGGCTACCGCGAGTGGCGGTGGAGGTTGGACTAGAATGTTCTGTTCTACAAACCCATATCCTTCTTCTCATCATCATCATCATCACCATCATCTTCCTTCACCGCCATACCAATCTTCTTCTGATTCTCCTCATGCAGAGTCCTCTGTTCAGAGTCAAACAGTGTCGGTTGGGAATTCAAAGATACTGCGGTTGTTCGGAGTGGACTTGGAGTGCCAAACCGACATGTCGGAACCCGAACCACCGTCGACACTCAGTGTCGGGTCAAGCTTAAGTTTATCGGGTCGAGATCCAACCCGCCACAGCTTCTACACACATTATTCTTCTCCTCTTCCTCATCACATGCTAGAGGATGATCAAACTACCTTTATCATGAGTAGCATTATAAAAAACATCACACTTAATCTATACATTTCTCTTTAG | 906 | 51.99 | MSINHFSPGFHRPLFSTPQLPIMLNPKSSLSVAAAADLLPMFEKPLTPSDVGKLNRLVIPKQYAEKYFPLSPSAAVAAAGDSADKGLLLSFEDESGKIWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDVVVFERHRRDGDRLFIGWKRRSAPSPADTAVATASGGGGWTRMFCSTNPYPSSHHHHHHHHLPSPPYQSSSDSPHAESSVQSQTVSVGNSKILRLFGVDLECQTDMSEPEPPSTLSVGSSLSLSGRDPTRHSFYTHYSSPLPHHMLEDDQTTFIMSSIIKNITLNLYISL | 301 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 33700239 | 33702128 | + | ClCG10G018660.1 | Cla10g01776 | 283435 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g01776 | 301 | CDD | B3_DNA | 40 | 142 | IPR003340 | GO:0003677 | |
Cla10g01776 | 301 | SMART | B3_2 | 42 | 153 | IPR003340 | GO:0003677 | |
Cla10g01776 | 301 | MobiDBLite | consensus disorder prediction | 182 | 216 | - | - | |
Cla10g01776 | 301 | Gene3D | - | 33 | 161 | IPR015300 | - | |
Cla10g01776 | 301 | MobiDBLite | consensus disorder prediction | 195 | 216 | - | - | |
Cla10g01776 | 301 | Pfam | B3 DNA binding domain | 42 | 152 | IPR003340 | GO:0003677 | |
Cla10g01776 | 301 | SUPERFAMILY | DNA-binding pseudobarrel domain | 40 | 153 | IPR015300 | - | |
Cla10g01776 | 301 | MobiDBLite | consensus disorder prediction | 238 | 254 | - | - | |
Cla10g01776 | 301 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 39 | 243 | IPR044800 | GO:0003700 | |
Cla10g01776 | 301 | MobiDBLite | consensus disorder prediction | 235 | 254 | - | - | |
Cla10g01776 | 301 | PANTHER | B3 DOMAIN-CONTAINING PROTEIN OS11G0156000 | 39 | 243 | - | - | |
Cla10g01776 | 301 | ProSiteProfiles | B3 DNA-binding domain profile. | 42 | 153 | IPR003340 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla06g00220 | Cla-Chr6:2625118 | Cla10g01776 | Cla-Chr10:33700239 | 1.92E-46 | dispersed | |
Cla06g01223 | Cla-Chr6:25468459 | Cla10g01776 | Cla-Chr10:33700239 | 1.14E-28 | dispersed | |
Cla10g01776 | Cla-Chr10:33700239 | Cla10g02148 | Cla-Chr10:37094920 | 1.61E-17 | dispersed | |
Cla10g01776 | Cla-Chr10:33700239 | Cla07g00776 | Cla-Chr7:21656637 | 8.06E-47 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61939 | PF02362 | B3 | 9.40E-31 | CL0405 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g01776 | - | - | bhj:120091802 | 457.603 |