Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01783 ATGTGGGCAAGCGCCGAAGGAGGGCCGCCGGAGGTAACTCTGGAGACTTCCATGGGTTCTTTCACCGTCGAGCTTTACTTCAAACACGCACCGAGAACATGTAGAAACTTCATTGAGCTTTCCCGGCGAGGTTATTATGACAATGTCAAATTCCACCGGATTATTAAGGATTTTATAGTGCAAGGTGGAGATCCCACAGGAACTGGACGGGGTGGGGAATCTATTTATGGCAAGAAGTTTGAGGATGAAATAAAACCAGAGTTGAAGCACACTGGAGCAGGTATTCTATCAATGGCAAATGCTGGTCCTGATACAAATGGAAGCCAATTCTTTATCACTCTTGCTCCTTGCCCATCCTTAGATGGAAAGCACTCTATCTTTGGAAGAGTTTGTAGGGGAATGGAAATAATCAAAAGGCTTGGCAGTGTACAAACTGATAACAATGATAGGTATGCTGCCTTCTCCTTTGCTATGTTTCCATATTTTGGTACTTTGATTAAAGGAAACTGGATTCCTGTTGTCTCTAGATCAGTAGAGCTTATTAATCAGGATAGGGGTGGTATAAGTAAATTACTTTTGAATCGTGTATACTGTTTCTGTTTTGCTCTGCCGAATGCTGAGCTAATTCCAAATAACAGAAAGAACGTAACTTTTCAGCAATTCCTAACGACCCCAAATTACTTTTTCCTAGTATTACCCATCCATGATGTGAAAATACTACGGGCATCAGTTAAAGACTAA 741 41.57 MWASAEGGPPEVTLETSMGSFTVELYFKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQGGDPTGTGRGGESIYGKKFEDEIKPELKHTGAGILSMANAGPDTNGSQFFITLAPCPSLDGKHSIFGRVCRGMEIIKRLGSVQTDNNDRYAAFSFAMFPYFGTLIKGNWIPVVSRSVELINQDRGGISKLLLNRVYCFCFALPNAELIPNNRKNVTFQQFLTTPNYFFLVLPIHDVKILRASVKD 246
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 33755927 33759924 + ClCG10G018730.2 Cla10g01783 283442
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01783 246 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 63 IPR002130 GO:0000413|GO:0003755
Cla10g01783 246 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 121 IPR002130 GO:0000413|GO:0003755
Cla10g01783 246 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 IPR002130 GO:0000413|GO:0003755
Cla10g01783 246 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Cla10g01783 246 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 25 40 IPR002130 GO:0000413|GO:0003755
Cla10g01783 246 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 15 150 IPR002130 GO:0000413|GO:0003755
Cla10g01783 246 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 5 150 IPR044666 -
Cla10g01783 246 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 1 5 150 - -
Cla10g01783 246 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 149 IPR002130 GO:0000413|GO:0003755
Cla10g01783 246 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 46 63 IPR020892 GO:0003755|GO:0006457
Cla10g01783 246 Gene3D - 3 153 IPR029000 -
Cla10g01783 246 SUPERFAMILY Cyclophilin-like 12 150 IPR029000 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01233 Cla-Chr1:24544505 Cla10g01783 Cla-Chr10:33755927 4.45E-45 dispersed
Cla05g00226 Cla-Chr5:2017811 Cla10g01783 Cla-Chr10:33755927 1.16E-42 dispersed
Cla05g01847 Cla-Chr5:30358492 Cla10g01783 Cla-Chr10:33755927 2.78E-43 dispersed
Cla10g01783 Cla-Chr10:33755927 Cla09g01711 Cla-Chr9:34266441 1.73E-34 dispersed
Cla11g00698 Cla-Chr11:8677283 Cla10g01783 Cla-Chr10:33755927 4.11E-13 dispersed
Cla10g01783 Cla-Chr10:33755927 Cla01g01716 Cla-Chr1:32086444 5.48E-44 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01783 K12733 - csv:101222111 308.916