Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla10g01783 | ATGTGGGCAAGCGCCGAAGGAGGGCCGCCGGAGGTAACTCTGGAGACTTCCATGGGTTCTTTCACCGTCGAGCTTTACTTCAAACACGCACCGAGAACATGTAGAAACTTCATTGAGCTTTCCCGGCGAGGTTATTATGACAATGTCAAATTCCACCGGATTATTAAGGATTTTATAGTGCAAGGTGGAGATCCCACAGGAACTGGACGGGGTGGGGAATCTATTTATGGCAAGAAGTTTGAGGATGAAATAAAACCAGAGTTGAAGCACACTGGAGCAGGTATTCTATCAATGGCAAATGCTGGTCCTGATACAAATGGAAGCCAATTCTTTATCACTCTTGCTCCTTGCCCATCCTTAGATGGAAAGCACTCTATCTTTGGAAGAGTTTGTAGGGGAATGGAAATAATCAAAAGGCTTGGCAGTGTACAAACTGATAACAATGATAGGTATGCTGCCTTCTCCTTTGCTATGTTTCCATATTTTGGTACTTTGATTAAAGGAAACTGGATTCCTGTTGTCTCTAGATCAGTAGAGCTTATTAATCAGGATAGGGGTGGTATAAGTAAATTACTTTTGAATCGTGTATACTGTTTCTGTTTTGCTCTGCCGAATGCTGAGCTAATTCCAAATAACAGAAAGAACGTAACTTTTCAGCAATTCCTAACGACCCCAAATTACTTTTTCCTAGTATTACCCATCCATGATGTGAAAATACTACGGGCATCAGTTAAAGACTAA | 741 | 41.57 | MWASAEGGPPEVTLETSMGSFTVELYFKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQGGDPTGTGRGGESIYGKKFEDEIKPELKHTGAGILSMANAGPDTNGSQFFITLAPCPSLDGKHSIFGRVCRGMEIIKRLGSVQTDNNDRYAAFSFAMFPYFGTLIKGNWIPVVSRSVELINQDRGGISKLLLNRVYCFCFALPNAELIPNNRKNVTFQQFLTTPNYFFLVLPIHDVKILRASVKD | 246 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 33755927 | 33759924 | + | ClCG10G018730.2 | Cla10g01783 | 283442 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla10g01783 | 246 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 51 | 63 | IPR002130 | GO:0000413|GO:0003755 | |
| Cla10g01783 | 246 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 109 | 121 | IPR002130 | GO:0000413|GO:0003755 | |
| Cla10g01783 | 246 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 137 | IPR002130 | GO:0000413|GO:0003755 | |
| Cla10g01783 | 246 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 94 | 109 | IPR002130 | GO:0000413|GO:0003755 | |
| Cla10g01783 | 246 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 25 | 40 | IPR002130 | GO:0000413|GO:0003755 | |
| Cla10g01783 | 246 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 15 | 150 | IPR002130 | GO:0000413|GO:0003755 | |
| Cla10g01783 | 246 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | 5 | 150 | IPR044666 | - | |
| Cla10g01783 | 246 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 1 | 5 | 150 | - | - | |
| Cla10g01783 | 246 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 12 | 149 | IPR002130 | GO:0000413|GO:0003755 | |
| Cla10g01783 | 246 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 46 | 63 | IPR020892 | GO:0003755|GO:0006457 | |
| Cla10g01783 | 246 | Gene3D | - | 3 | 153 | IPR029000 | - | |
| Cla10g01783 | 246 | SUPERFAMILY | Cyclophilin-like | 12 | 150 | IPR029000 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla01g01233 | Cla-Chr1:24544505 | Cla10g01783 | Cla-Chr10:33755927 | 4.45E-45 | dispersed | |
| Cla05g00226 | Cla-Chr5:2017811 | Cla10g01783 | Cla-Chr10:33755927 | 1.16E-42 | dispersed | |
| Cla05g01847 | Cla-Chr5:30358492 | Cla10g01783 | Cla-Chr10:33755927 | 2.78E-43 | dispersed | |
| Cla10g01783 | Cla-Chr10:33755927 | Cla09g01711 | Cla-Chr9:34266441 | 1.73E-34 | dispersed | |
| Cla11g00698 | Cla-Chr11:8677283 | Cla10g01783 | Cla-Chr10:33755927 | 4.11E-13 | dispersed | |
| Cla10g01783 | Cla-Chr10:33755927 | Cla01g01716 | Cla-Chr1:32086444 | 5.48E-44 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla10g01783 | K12733 | - | csv:101222111 | 308.916 |