Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01818 ATGCTCAAATTACCTTTAATTCAAACATTCATTTTCCTCTTCGCCGCCGCCGTCTCTTCAACCCATGCTGACAGACAGGCGTATGTCGTGTACATGGGAGCATTACCAAAATTGGAGAGCCATGAAGTTCTAGCAGATCATCATCATAACCTCCTTGCTAATGCTGTTGGAGATGAGGAATTGGCAAGAAAAGCCAAAATTTATAGCTATGGAAGAAGCTTCAATGGATTTGCTGCAAGGCTCTTGCCCCATGAAGCCAACAAACTAGCAAAGGAAAAAAGTGTGGTGTCGGTATTTCGGAGCAAGACGAGGAAACTGCATACAACAAGATCATGGGACTTTTTGGGGCTGTCGGAGGCGGCGAGCCGGCAGAACGCCGCCGCAGAATCCGACATAATAGTGGGATTGTTGGATTCGGGGATATGGATGGAGGGTCCAAGTTTTAAAGATGATGGCTATGGCGAAATTCCGTCTAAGTGGAAAGGCAAGTGTGTCACTGGCCATAACTTCACTGCCTGTAACAGGAAAGTGATCGGCGCGAGGTTCTTCAACCTTGAAAAAATAGACACCATCAACCAAAGCCCCGCCGACGAGATCGGTCACGGCTCCCACACCGCCTCCACAGTCGCCGGATCCGCCGTGTACGGCGCCAGTCTCTACGGCATCGCCGGAGGCACAGCGCGGGGAGCCGACATGGACCTGCTGGCCGGATTCGACGACGCGATCGCGGACGGAGTTGACATCATATCGGTGTCGATCGGCGGCGACTCGACGGAATTCTTCGAGGATCCGATCGCGATCGGGTCGTTTCACGCAATGGAGAAGGGATATTGA 834 51.92 MLKLPLIQTFIFLFAAAVSSTHADRQAYVVYMGALPKLESHEVLADHHHNLLANAVGDEELARKAKIYSYGRSFNGFAARLLPHEANKLAKEKSVVSVFRSKTRKLHTTRSWDFLGLSEAASRQNAAAESDIIVGLLDSGIWMEGPSFKDDGYGEIPSKWKGKCVTGHNFTACNRKVIGARFFNLEKIDTINQSPADEIGHGSHTASTVAGSAVYGASLYGIAGGTARGADMDLLAGFDDAIADGVDIISVSIGGDSTEFFEDPIAIGSFHAMEKGY 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34080566 34082365 + ClCG10G019150.2 Cla10g01818 283477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01818 277 SUPERFAMILY Subtilisin-like 6 262 IPR036852 GO:0004252|GO:0006508
Cla10g01818 277 Gene3D Peptidase S8/S53 domain 131 230 IPR036852 GO:0004252|GO:0006508
Cla10g01818 277 Gene3D Peptidase S8/S53 domain 232 276 IPR036852 GO:0004252|GO:0006508
Cla10g01818 277 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 107 IPR037045 -
Cla10g01818 277 Pfam Subtilase family 130 258 IPR000209 GO:0006508|GO:0008236
Cla10g01818 277 Pfam Peptidase inhibitor I9 28 107 IPR010259 -
Cla10g01818 277 PANTHER CUCUMISIN PROTEIN 17 276 - -
Cla10g01818 277 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 276 IPR045051 -
Cla10g01818 277 ProSiteProfiles Serine proteases, subtilase domain profile. 111 277 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g01818 Cla-Chr10:34080566 Cla07g00342 Cla-Chr7:4091437 3.38E-70 dispersed
Cla10g01818 Cla-Chr10:34080566 Cla04g00975 Cla-Chr4:24875088 1.30E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01818 - - egr:104438975 338.961