Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01819 ATGACGGTGGCGGCTTCTACGATTGATAGGGATTTCAGTACCATCGTCAAGTTGGGTAACAACAAGAAGTTATCTCATTACCTAATCATACCTCTGTTGATCCAAGGTGGTGTGATTATGGGAGTCTTGATGAGAAAAAATGCCTACATTAACTCCACCAAAAACCCTCAAGCTGTCATTTACAAAACTACCGCAAGGAAGGTTGATGCTCCCTCTTTGGCTTACTTTTCTTCTAGAGGTCCTCAAACAATAGCTCCCCCTATTCTTAAGCCGGACATTGCAGCACCTGGGATGAACATTTTAGCAGCGTTCTCAAAATTGGCTTCAATTCCGAGCGGTAGACATTCCCTTTTCAACCTTCTTTCTGGCACTTCTATGGCTTGTCCCCACGCCGCCGCCGCCGCCGCCTATCTCAAAACCTTCCACCCCACTTGGTCCCCCGCCGCCATCAAGTCCGCCCTTATCACCACCGCAACGCCATTAAAGATCGGAGATAATTTGGACGCGATCGGCGGCGGCGCCGGCCAAATTAATCCGACCAAAGCGGTGCATCCAGGCCTCATTTACGACCTCTCTCGCACCTCTTACCTCTCTTTTCTTTGCTCCAACAAACGCTACTCCGGCACCGCCCTTGCCATCCTCATCGGAAACACCTCTTTTAACTGCTCTGCCGTCCCGCTAGCCACCGGCTACGACGCCCTCAACTACCCTTCCATGTACGTGCCCCTCGACTACGACTCCACCTCTGTTTCCGCCGTCTTCCACCGGACAGTCACCCACGTCGGATTCGGCCCATCGACGTACAAGGCAAAGGTCAAATCGCCGGCGGGTTTGTCGGTGAGGGTGTTGCCGGAGACTCTGAAATTCGATCGGGCGTACGAAAAACAATCGTTTAAGGTGGTGGTGGAAGGGGCAGCGCCCGCTGTGGGGGAGGCTCCGTTGACAGCTTCACTTGAATGGGATGATTCTAAGCATAACGTTAGGAGCCCAATTTTGGTGTTTAAGGTTTAA 1011 52.03 MTVAASTIDRDFSTIVKLGNNKKLSHYLIIPLLIQGGVIMGVLMRKNAYINSTKNPQAVIYKTTARKVDAPSLAYFSSRGPQTIAPPILKPDIAAPGMNILAAFSKLASIPSGRHSLFNLLSGTSMACPHAAAAAAYLKTFHPTWSPAAIKSALITTATPLKIGDNLDAIGGGAGQINPTKAVHPGLIYDLSRTSYLSFLCSNKRYSGTALAILIGNTSFNCSAVPLATGYDALNYPSMYVPLDYDSTSVSAVFHRTVTHVGFGPSTYKAKVKSPAGLSVRVLPETLKFDRAYEKQSFKVVVEGAAPAVGEAPLTASLEWDDSKHNVRSPILVFKV 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34082431 34086488 + ClCG10G019155.1 Cla10g01819 283478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01819 336 SUPERFAMILY Subtilisin-like 2 187 IPR036852 GO:0004252|GO:0006508
Cla10g01819 336 ProSiteProfiles Serine proteases, subtilase domain profile. 1 183 - -
Cla10g01819 336 Gene3D - 200 335 - -
Cla10g01819 336 PANTHER CUCUMISIN PROTEIN 42 336 - -
Cla10g01819 336 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 42 336 IPR045051 -
Cla10g01819 336 Gene3D - 47 66 - -
Cla10g01819 336 Pfam Fibronectin type-III domain 234 333 IPR041469 -
Cla10g01819 336 Pfam Subtilase family 43 161 IPR000209 GO:0006508|GO:0008236
Cla10g01819 336 Gene3D Peptidase S8/S53 domain 67 196 IPR036852 GO:0004252|GO:0006508
Cla10g01819 336 ProSitePatterns Serine proteases, subtilase family, serine active site. 123 133 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g01819 Cla-Chr10:34082431 Cla07g00629 Cla-Chr7:11999095 1.28E-85 dispersed
Cla10g01819 Cla-Chr10:34082431 Cla04g00975 Cla-Chr4:24875088 8.13E-98 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01819 - - cmo:103486592 475.707