Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01842 ATGGAAATGCCCGGCAGGAGGTTGAACTATACGCTTCTCAGTCAAATTCCAGACGACCAATACAGTGGCGGTGTTGCCGGAGTTTCGACAACGTTTAAAGAAACATCATCGGGAGAGGGGAAGAACGACAGGAGGAAGTTGGAAAGAGGATTGGATTGGGAAGCTGCTGGTGATCACAGGGCGGGCCAGCAGCAGCAGGTTAATTGGATCGGCAATATGTACTCGGCGTTTGGTTTGCAGAGGCAGTCCAGTGGAAGCAGCTTTGGAGAGAGCTCGATATCCGGGGAGTACTATGCACCGACACCATCTACTACGGTGGCTAATGAGACGGATGGGTTTGGTTGTACGCACGATGATGTGCTTAGAATTGGAGGCGATTCGAGAGCACAGATGGCCGAGATGGCCGCTGGGGCTGGAGGATCTTCTGCTAAGACCTGGGCGCAACAGACGGAGGAGAGTTATCAACTGCAGTTGGCATTGGCGCTTCGGCTTTCATCTGTGGCCACTTGTGCTGATGATCCTAATTTCTTAAATCCATTTCAGGATGATTCAGCTTTAAGGAGGTCGATGAGCTCTGTTGAGGCTGTGTCACATCGATTTTGGGTGAATGGCTGTCTATCGTACTTTGACAAAGTTCCTGATGGGTTTTATCTAATCCATGGAATGGATCCATATGTGTGGACTGTGTGCACGAGCCTGCCTGACAATGATCGCATGCCATCAATTGAATCTCTAAAGTCTGTTGATCCCAGTACAGATTCGTCAATTGAAGTTGTTCTGATTGATCGGCGCACTGATCCCAACTTAAAAGACCTCCAAAATTGGGTCCAAGGCATTTCTTGCAGCTCTATAACTACAGAAGAGGTTGTAGATCAGCTTGCAAAACTTGTCTGTAGGAGTTTGGGTGGCTCAGTTTCTGGAGAAGATGCGTTGGTGTCCATCTGGAGGGAGTGCAGTGATAACTTGAAGGAGACCTTAGGCTCAGTGGTTATTCCTCTTGGTGGACTCTCTGTAGGACTCTGCCGGCATCGTGCTCTTCTTTTCAAAGTGTTAGCTGACACAATTGATTTACCCTGTCGTGTAGCCAAGGGCTGTAAATATTGCTCATGCCATGATTCTTCTTCTTGTCTAGTTCAGTTTGGGCTTGACAAGGAGTATCTGGTTGACTTAATTGGCAATCCTGGTTGCTTATATGAGCCTGATTCTTTACTCAATGGTCCATCCTCCATTTTGATCTCCTCGCCATTGCGATTTCCACGACTAAAGCCAGTAGAGCCTGCCATTGATTTCAGGTCACTGGCTAAACAGTACTTTTCAGATTGCCAGTTGCTCAATGTTGTTTTCGATGAAGCTTCCTCATGTAATCACACAGAAATTACTGTGGATGGAGAAGATGGCGCACTCCCATTGTATTTAAAGCAGTTTGATAGGAAGTTCACAAACAGAAGCAACCAAATGCTTGTCACTGGTGATAGTGATGAAAAATCCATTTTACTGCATGCAAAAACTTCGCAGCCTAACTCCCAAGACAGGGATTTCCAACTGTATAAACCACGTGATAATTCTCATAATCTTATACAACCAACTGTCCAGGTTGAGGATTCAATCCCACTGAAGTACGTTCCACATATTAATCGTGGAAGTGTGCAGTCACTTTTGGATATGTCCCAGCCAAGGATGGATTCTACTATGGACTTAAGGTTTGCACCAGGAGGTCAGCTAATACCAAGCACTCGGAGTAAAACACTTCCCCTTGGTGCGGAGGATTTGGACATTCCATGGAGTGATCTTGTTTTAAAAGAAAGAATTGGAGCAGGTTCCTTCGGAACTGTGCATCGTGCTGATTGGCATGGATCGGAAGTTGCTGTGAAGATCCTCACAGAACAAGACTTCCATCCTGAACGCGTTAATGAGTTTCTGAGAGAGGTTGCTATCATGAAATCCTTACGACATCCTAATATTGTACTGTTTATGGGTGCGGTGACCAAGCCACCAAACCTATCCATTGTCACGGAATATCTATCGAGAGGTAGCTTGTATAGGCTTTTGCATAAGTCAGGTGTCAAAGACATAGATGAAACCCGTCGGATAAATATGGCTTTTGATGTGGCAAAGGGAATGAACTATCTCCACAGACGTGATCCTCCAATTGTTCATCGTGATTTAAAATCACCTAATCTTTTAGTTGACAAGAAGTATACAGTAAAGGTTTGTGATTTTGGTCTCTCCCGTTTAAAGGCACGCACATTTCTTTCATCCAAATCCGCAGCTGGAACACCTGAATGGATGGCGCCAGAAGTACTACGTGATGAACCCTCAAATGAAAAGTCAGATGTTTACAGCTTTGGAGTGATCTTGTGGGAGTTGGCAACGTTGCAACAGCCATGGTGTAATCTAAACCCAGCTCAGGTTTTTTTCTCCCGTCTTCTTATAGTAATGTTGTCAGATGAAAAATTGCATTGTTATCAAGAGCAAATGATTTGCATGTTTGTTGTCCACTTTGTTGCTCAGGTTGTTGCAGCTGTTGGATTTAAGGGCAAAAGGCTTGACATCCCACGTGATGTAAATCCCAAATTGGCTTCCTTAATTGTGGCTTGCTGGGCCGATGAGCCGTGGAAACGTCCATCTTTTTCCACCATAATGGAAACCTTGAAGCCAATGACTAAACAAGCACCACCTCAACAAGGTCGTGCAGACACACTCTCAGTTATGTGA 2715 45.16 MEMPGRRLNYTLLSQIPDDQYSGGVAGVSTTFKETSSGEGKNDRRKLERGLDWEAAGDHRAGQQQQVNWIGNMYSAFGLQRQSSGSSFGESSISGEYYAPTPSTTVANETDGFGCTHDDVLRIGGDSRAQMAEMAAGAGGSSAKTWAQQTEESYQLQLALALRLSSVATCADDPNFLNPFQDDSALRRSMSSVEAVSHRFWVNGCLSYFDKVPDGFYLIHGMDPYVWTVCTSLPDNDRMPSIESLKSVDPSTDSSIEVVLIDRRTDPNLKDLQNWVQGISCSSITTEEVVDQLAKLVCRSLGGSVSGEDALVSIWRECSDNLKETLGSVVIPLGGLSVGLCRHRALLFKVLADTIDLPCRVAKGCKYCSCHDSSSCLVQFGLDKEYLVDLIGNPGCLYEPDSLLNGPSSILISSPLRFPRLKPVEPAIDFRSLAKQYFSDCQLLNVVFDEASSCNHTEITVDGEDGALPLYLKQFDRKFTNRSNQMLVTGDSDEKSILLHAKTSQPNSQDRDFQLYKPRDNSHNLIQPTVQVEDSIPLKYVPHINRGSVQSLLDMSQPRMDSTMDLRFAPGGQLIPSTRSKTLPLGAEDLDIPWSDLVLKERIGAGSFGTVHRADWHGSEVAVKILTEQDFHPERVNEFLREVAIMKSLRHPNIVLFMGAVTKPPNLSIVTEYLSRGSLYRLLHKSGVKDIDETRRINMAFDVAKGMNYLHRRDPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKARTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWCNLNPAQVFFSRLLIVMLSDEKLHCYQEQMICMFVVHFVAQVVAAVGFKGKRLDIPRDVNPKLASLIVACWADEPWKRPSFSTIMETLKPMTKQAPPQQGRADTLSVM 904
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34356811 34368917 - ClCG10G019380.2 Cla10g01842 283501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01842 904 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 134 805 - -
Cla10g01842 904 Gene3D Transferase(Phosphotransferase) domain 1 676 898 - -
Cla10g01842 904 CDD STKc_MAP3K-like 603 884 - -
Cla10g01842 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 717 729 IPR008271 GO:0004672|GO:0006468
Cla10g01842 904 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 836 898 - -
Cla10g01842 904 Pfam Protein tyrosine and serine/threonine kinase 598 884 IPR001245 GO:0004672|GO:0006468
Cla10g01842 904 ProSitePatterns Protein kinases ATP-binding region signature. 603 624 IPR017441 GO:0005524
Cla10g01842 904 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 836 898 - -
Cla10g01842 904 ProSiteProfiles Protein kinase domain profile. 597 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01842 904 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 134 805 - -
Cla10g01842 904 SUPERFAMILY Protein kinase-like (PK-like) 579 884 IPR011009 -
Cla10g01842 904 SMART serkin_6 597 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01842 904 Pfam Ethylene-responsive protein kinase Le-CTR1 193 397 - -
Cla10g01842 904 Gene3D Phosphorylase Kinase; domain 1 590 675 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla04g00964 Cla10g01842 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g01842 Cla-Chr10:34356811 Cla11g01429 Cla-Chr11:27854706 5.96E-70 dispersed
Cla10g01842 Cla-Chr10:34356811 Cla04g00964 Cla-Chr4:24754951 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80881 PF07714 PK_Tyr_Ser-Thr 4.90E-65 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01842 K14510 - csv:101208452 1634.39