Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01852 ATGTTCACGGCGGGGACGGACACCACCACCAGTACACTAGAATGGGCAATGGCAGAGCTCCTCCACAACCCAGCGGCGCTGCAGAAACTTCAGGCGGAGCTACGAGCCACCATCCCCCCGAACGGCAACCTCGAAGAAACCCATTTCCAAAACCTCCCATATCTCGATGCCGTCGTCAAAGAAACCCTCCGCCTCCACCCCCCGCTGCCGTTCCTCTTCCCAAGAATGGCAATGAAGCCCTGCAAAATTCTCGGCTACCGGATTCCGGCTGAAACGCAAGTCTTGGTCAACTTCTGGGCCATCGGCCGTGACCCCAAAAACTGGAAAGAACCTCTGGTTTTCTCACCGGAGAGATTCTTGGATCCTACAGGTGGCAAGGATTTCAAAGGTCAACACTTTGACTTCATTCCGTTTGGCTCCGGCCGCCGCATGTGCCCGGCGGTGCCGCTGGCGTCGAGGGTTCTTCCAATGGCTCTGGGGTCGTTGGTACTGTCGTTTGATTGGGATCTGCCGGAGGGAGTTCGGGCGGAGGAGATGGACATGTCGGAGCAAATGGGGATTACCCTTCGAAAGAAAATTCCTTTGAAGGCCATTCCGACTCCACACAAACGAGGTTGTTTGGATTAG 627 55.82 MFTAGTDTTTSTLEWAMAELLHNPAALQKLQAELRATIPPNGNLEETHFQNLPYLDAVVKETLRLHPPLPFLFPRMAMKPCKILGYRIPAETQVLVNFWAIGRDPKNWKEPLVFSPERFLDPTGGKDFKGQHFDFIPFGSGRRMCPAVPLASRVLPMALGSLVLSFDWDLPEGVRAEEMDMSEQMGITLRKKIPLKAIPTPHKRGCLD 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34437632 34438258 - ClCG10G019480.1 Cla10g01852 283511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01852 208 Pfam Cytochrome P450 1 190 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01852 208 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01852 208 PRINTS E-class P450 group I signature 135 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01852 208 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01852 208 PRINTS E-class P450 group I signature 97 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01852 208 PRINTS E-class P450 group I signature 145 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01852 208 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01852 208 PRINTS P450 superfamily signature 136 145 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01852 208 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01852 208 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 138 147 IPR017972 GO:0005506|GO:0016705
Cla10g01852 208 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 204 - -
Cla10g01852 208 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY G, POLYPEPTIDE 1 1 204 - -
Cla10g01852 208 Gene3D Cytochrome P450 1 198 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla10g01852 208 SUPERFAMILY Cytochrome P450 1 201 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g01852 Cla-Chr10:34437632 Cla03g00299 Cla-Chr3:3667884 4.70E-64 dispersed
Cla10g01851 Cla-Chr10:34432345 Cla10g01852 Cla-Chr10:34437632 7.63E-142 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01852 - - csv:101222700 382.104