Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01859 ATGGCTTCGTCGAAGGAAATGAAGAAGGAGAGAGCAGAGGCGGCGGCAAGGCTTGCTGCTTCCGATCTCAGAGACGTTAACAGAGAAGAGGAGCAGCAGGCGGCGGCGCCAAAAACCGAGAGAAAAGCCACGGTGGAGGTCGTGGAGGCGGACCGGTCGACGGTGCAAGATCAGCAGCCGAGGTCCGGCGTCATTGGATCAGTACTGAAGGCAGTGCAGGACACGTACGAACACGCGAAGGAAGCGGTGGTCGGAAAGAGCCACGAAGCGGAGGAGAAAGGCCGAGAAGTGAAGGACACGTCTGCGGAGAAGGCAAGAGAGACGACCGATGCGGCAGGGAGGAAAATGGACGAGTACGGAAGTGCTGCGGCGGAGAAGGCGAGGGAGACGAAGGAAGCTGCTGGAGAGACGGCAGCCTCAGCAAGGGGGAAAATGAGCGAAAATGGAGAGAAAACGAGGGATAAAACTGGCGAATATAAGGATTACACGGCGGAGAAGGCAAGGGAGACTAAGGATGCAGCGGCGAGAAAAGCAGGGGAATACAAAGATTACACGGCCGAGAAGACGTCGGAGGCTAAAGGAAAGGCTGGCGAGTACAAGGATTATGCAGCAGAGAAGGCGAAGGAAGCGAAGGACGCTGCAGCAAGAAAAGCAGGGGAATACAAAGATTACACCGCCGAGAAGGCGAGGGAAGCGACAGAATCGGCTAAGGGGAAGGCCGGTGAGTACAAGGATTACGCGGCAGAGAAGGCTAATCAAGCGAAGGAGAAGGCGGTGGAGTATAAGGACTACACGGCGGATAAGGCTAAGGAGACGAAGGATGCGGCAGCAAGAAAAACAGGGGAATACAGAGACTACGCGGCGGAGAAAGCGAGAGAGACGACAGATTACACAGCGGAGAAGGCAAAAGAAGGGAAAGATACGACGGTGAGCAAACTTGGGGAATTGAAAGATTCGGCGGCCGATGCTGCAAAGAGAGCTATGGAATATTTTTCTGGAAAGAAAGAGGAAGCCAAGGAGAAGGCATACGAGACAAAAGAAGTCGCAGAGGAATGGCAGGAAAAGATGGGGGAATCAGAGGAGGATACAAGGAGGAGGATGGAGGATCTCAGGCTGCAGGGAGAAGGAAGGAGGGGCAGCAGAGAAGAAGCAAAAGTGACACTCGAACGTAATAGGGGCGGTGGTGGCGCGGTGGTAGTAGGTCTGGAGGAGTCGCGGCCGGGGGCGTTGGCCTCAACTTTGAAGCAAGCAGATGACATGGCTGGGCAGACGTTCAACGACGTGGGTAGAATGGACGACGAGGAGGTGCGCTCGAAGGATCGTCAAGGGAAGATGTGA 1338 55.23 MASSKEMKKERAEAAARLAASDLRDVNREEEQQAAAPKTERKATVEVVEADRSTVQDQQPRSGVIGSVLKAVQDTYEHAKEAVVGKSHEAEEKGREVKDTSAEKARETTDAAGRKMDEYGSAAAEKARETKEAAGETAASARGKMSENGEKTRDKTGEYKDYTAEKARETKDAAARKAGEYKDYTAEKTSEAKGKAGEYKDYAAEKAKEAKDAAARKAGEYKDYTAEKAREATESAKGKAGEYKDYAAEKANQAKEKAVEYKDYTADKAKETKDAAARKTGEYRDYAAEKARETTDYTAEKAKEGKDTTVSKLGELKDSAADAAKRAMEYFSGKKEEAKEKAYETKEVAEEWQEKMGESEEDTRRRMEDLRLQGEGRRGSREEAKVTLERNRGGGGAVVVGLEESRPGALASTLKQADDMAGQTFNDVGRMDDEEVRSKDRQGKM 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34494045 34496174 - ClCG10G019560.1 Cla10g01859 283518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01859 445 Coils Coil 9 29 - -
Cla10g01859 445 MobiDBLite consensus disorder prediction 81 179 - -
Cla10g01859 445 MobiDBLite consensus disorder prediction 335 389 - -
Cla10g01859 445 Coils Coil 335 355 - -
Cla10g01859 445 MobiDBLite consensus disorder prediction 428 445 - -
Cla10g01859 445 PANTHER DAUER UP-REGULATED-RELATED 1 255 - -
Cla10g01859 445 MobiDBLite consensus disorder prediction 420 445 - -
Cla10g01859 445 MobiDBLite consensus disorder prediction 81 135 - -
Cla10g01859 445 PANTHER DAUER UP-REGULATED-RELATED 256 437 - -
Cla10g01859 445 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 236 294 - -
Cla10g01859 445 MobiDBLite consensus disorder prediction 1 45 - -
Cla10g01859 445 MobiDBLite consensus disorder prediction 146 179 - -
Cla10g01859 445 PANTHER DAUER UP-REGULATED-RELATED 236 294 - -
Cla10g01859 445 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 256 437 - -
Cla10g01859 445 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 1 255 - -
Cla10g01859 445 MobiDBLite consensus disorder prediction 335 390 - -
Cla10g01859 445 Gene3D - 150 195 - -
Cla10g01859 445 Gene3D - 281 351 - -
Cla10g01859 445 Gene3D - 196 259 - -
Cla10g01859 445 Gene3D - 94 149 - -
Cla10g01859 445 Pfam Late embryogenesis abundant protein 262 302 IPR004238 -
Cla10g01859 445 Pfam Late embryogenesis abundant protein 192 221 IPR004238 -
Cla10g01859 445 Pfam Late embryogenesis abundant protein 295 327 IPR004238 -
Cla10g01859 445 Pfam Late embryogenesis abundant protein 161 198 IPR004238 -
Cla10g01859 445 Pfam Late embryogenesis abundant protein 222 260 IPR004238 -
Cla10g01859 445 Pfam Late embryogenesis abundant protein 144 180 IPR004238 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g00741 Cla-Chr5:7017095 Cla10g01859 Cla-Chr10:34494045 9.43E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01859 - - cmo:103486554 509.605