Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01861 ATGAAAAACGACGGGACATCGGAGACAACCAATCCAACTGATTTCCCGATGGTGAATTCATCTTCGAAAACTGGTAACATGGAGCCAATGCTTTTAAAAATTGGCATTCCTTTAGCTCTATCCGCAGCAGGTGGAGTATGTGCTATAATGATGGCAAGAGGTTCATTTCCAGCTTCCTTAAATCTCTTCAAACCCAAATCAAAACTCATGGAAAATGAGAACTTTCATTCAATTTCTTTAGAGAAAGAAGAAATTTTAGAAGCTGAGGGAGAAAAACCCAATGTTGAAGAAGTGATTCTAAGCTTAAAAGGCAAAGTTGAAGATCTTGAAAGGAAAGAAATGGATATAGAGAGGCAGTTTATTTGGTACCAAAATTTAAAAGAAAGAGAAGCTTTGTTGGTTGAGCTGAGGAACACTTTGGTTTTGGATATGGCTCATATAGATTTCTTGGAAAAAGAGATTATGCTAATGGAGGAAGAAAACAAGAGGTTTGAGAGTTTGGTAAGAGAATATTTGGGAGTTTCAGAGCAACTTGAAGGACAAAAAACAGAAAACAAGTTACTTGAGAGAGAAGTAAAGAGACTTAAGAAGAGATTGAAGGATCAATCAAAGATTATTAGAGAGAAGAATTTGAAGATTGAAGATAGTAAAACACAACTTTGGAGAAATAATGAAGAAATGGAAACAAAGAAAAGGATGATAGAGAAATTGGGGAATGAAGTAAAAGAGCTGAAAATGCAAATGGGTCAATTGCAAGAGGAGAAAAACAAAGCTCTACCCACCATATCAGAGATTGAAGCAGAAAAATCAGTAACAATGGAGGATTTCAACAAGCTTTCAAATGAATTCAATCAGTTGAAAGATGCATTTGAGGTGTTTAAAAAGCAAGAACAAGAACAGCAAGGCCAGAAAGAAACTCCTAAGGAAGGAGAAAGAAATCAAAACGAATCATCATCTGATAAAACTAACTCCACAAGGCCAAAGCTTCTTCAAAGGATAAGCTGTGTTGGGGGAAATGAAAAGATGAAAAGAAAAAATGAGTTAATCTCTCTGAATCTGCAGGAAAGAGACGGCCATCTCTTTTTCCTTGTCGATGCTCCTTATCGTCTTCACAAGAAGAATCTTCAGGACAAGCTAAAGAATCGCTGCGCTGCTGGCATATATTTCTGCAATGTGGCCGAGGCTGTTAGCACAAGTAGAAGGGCTCTAAGAGGAGCAAAAATACCTGAAAGTGAGTTTACAACTCTCCCAAATGGTCTGAAGTACTATGACTTGAAGGTTGGAGGAGGAACTAAGGCTGTGATTGGATCCCGTGTTGCAACAACCAATGAGCATTCTGATGGAATCCATACTGGTCCTGAGAAAATTACTCTGGTTCACTATGTGGCTAAATGGAGAGGGATCACCTTTATGACAAGTAGACAAGGGCTTGGTGTTGGTGGAGGAACGCCTTATGGATTTGATGTAGGCCAATCAGAAAGAGGAACGGTCCTCAAGGGATTGGATCTAGGTGTTCAAGGCATGAGGAGATTGCTTATAGTTCCTCCTGAGTTAGCTTACGGAAGCAAAGGGGTTCAAGAAATTCCTCCAAATGCAACAATAGAGTTGGATGTGGAATTGCTAGCCATCAAGCAAAGTCCATTTGGGTCTCCAGTAAAGATTGTTGAAGCCATTTCTGGAAGCAGCTTGCCTTATGGGAACAACGCATCTAGAAAAACTTCCTTTATTGTGACCATTCAAGAGGAATCCACCAGTCTGTATAAAGCCAAAACATCTTATACAGATTCTTCCTTCCACCTTTTCCATGCTCATGTCTTACTACTTTATTCTCAAGGCCCGTCCTCTATTTACGCTACTCTCGACCTAATCTGTTCCATAAATCAGCTCTTCCTCATTGACCCTTTGATACATGTTCCTTATCCTCTGAGTACCAATCCCAACTGTGGTGACTTAGACTATGCACTTCGTTGTGATTCTCATTCACAGAAACTCTACTTCGATGCACTCAATGGAAGTTCATATCCTATCCTCAAAATCAACGCTTCGAGTCAACGTTTGGTGATCCAACCATCTCCATGGGTTGCTGGCTCTTGTATTACTCAAGACATGTTGGTTAGTGAAGGCCTGTGGTTAAACCAATCACTCCCTTTTAACATCACTTCATCAAATACAATTTTTCTCTTGAACTGTTCTCCTCGCCTGCTGGTTTCGCCACTCAATTGCACTCCTTCAAGTCTCTGTCACCACTACTTGGCAAGTTCAGGACGAGTCGATGAAAAAAAAGCATTTCAGTGTGCAAGTGTTCTTGACCCTTGTTGTACCTTCATCGCTGGTGGTATGCCCTCAGCTTATAAGATAAGGCTTCATAACTCAGGCTGTAGAGCACTCAGGAGTATCCTCCATCTGGATGTAGAAAAGCCTGCAAACCAATGGGAGGAAGGTTTGGAAATTCAATGGGCTCCTCCACCTGAACCAATCTGTAGAACTCAATCTGATTGCACTGGAGCATCGGATTGTCTTCCTGCGGGTGGTTCAAACAGTCGTTCTCGTTGCCTTTGTAGAAGGAGCTACTACTGGAATCATATTCTTGGAACATGCCTGAGAACGAATAGGAAGAGCATGGTTAGACTGAGCATAAAGCTGTCGGTGTGTCTCGTTTCCTTTTTCATTCTAGCTGCGGTCATAGCTCTAATTACAGTCAGGAAGTCCAGAACTTTCAGTAAACAGGAAAAGCTATGTAAAGAAAGAGAGGATATGTTGAATTTAAGCCATGGCGTTAGACCAGCTAGGATGTTTCATCTGAAAGAGATGAAGAAAGCAACAAATGAATTTTCGAAAGACAGAGTCCTAGGCAGTGGTGGCTTTGGAGAGGTTTATAAAGGTGAACTTCAAGATGGGACTATCGTAGCCGTGAAGTCGGCCAAAGTGGGTAATCTAAAGAGCACCGAACAAATACTCAACGAAGTCGGAATACTATCTCAAGTAAATCATAGGAATCTTGTGAAACTTATAGGTTGCTGTGTAGAAACTGAGCAACCATTGATGATATATGAATACATTTCCAATGGCACCCTCCATGACCATTTACATGGTAAGATTCCTTCTTTCTTGGATTGGAGAAAAAGGCTGAAAATTGCTTCACAAACTGCTGAAGCATTAGCTTATCTGCATTCAGCTGCATATCCTCCCATCTATCATAGAGATGTCAAGTCAACAAATATTCTTTTAGATGATAAATTCAATGCTAAAGTCTCAGATTTTGGACTTTCTAGATTGGCTTTGCCAGGAATAAGCCATGTTTCAACTTGTGCACAGGGTACATTAGGTTACCTAGACCCAGAATACTATCGAAATTACCAATTAACAGATAAAAGTGATGTGTATAGTTTTGGAGTTGTTCTACTCGAGCTTTTAACCTCTCAGAAGGCCATAGATTTCACAAGAGATGAAAATTGTGTCAATCTAGCGATCTATGTGATCCAAAAAGTGCAAAATGGTGCATTCATTGACGCCATCGATAAACAGCTTATCAGTGATGATCCATCCAGCAATATACTAATCAGTGTGAAGCACTTCTTGGAGCTCGCACTCGCCTGTTTGAGGGAGAAGAAAGTGGAAAGGCCTTTCATGAAGGATGTACTCCAAGAACTTGAATACATAACTCAGATATTGGACAATCCAGAAATAGTTGCTGAAGAAGGTAAGTCTTAA 3711 40.29 MKNDGTSETTNPTDFPMVNSSSKTGNMEPMLLKIGIPLALSAAGGVCAIMMARGSFPASLNLFKPKSKLMENENFHSISLEKEEILEAEGEKPNVEEVILSLKGKVEDLERKEMDIERQFIWYQNLKEREALLVELRNTLVLDMAHIDFLEKEIMLMEEENKRFESLVREYLGVSEQLEGQKTENKLLEREVKRLKKRLKDQSKIIREKNLKIEDSKTQLWRNNEEMETKKRMIEKLGNEVKELKMQMGQLQEEKNKALPTISEIEAEKSVTMEDFNKLSNEFNQLKDAFEVFKKQEQEQQGQKETPKEGERNQNESSSDKTNSTRPKLLQRISCVGGNEKMKRKNELISLNLQERDGHLFFLVDAPYRLHKKNLQDKLKNRCAAGIYFCNVAEAVSTSRRALRGAKIPESEFTTLPNGLKYYDLKVGGGTKAVIGSRVATTNEHSDGIHTGPEKITLVHYVAKWRGITFMTSRQGLGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMRRLLIVPPELAYGSKGVQEIPPNATIELDVELLAIKQSPFGSPVKIVEAISGSSLPYGNNASRKTSFIVTIQEESTSLYKAKTSYTDSSFHLFHAHVLLLYSQGPSSIYATLDLICSINQLFLIDPLIHVPYPLSTNPNCGDLDYALRCDSHSQKLYFDALNGSSYPILKINASSQRLVIQPSPWVAGSCITQDMLVSEGLWLNQSLPFNITSSNTIFLLNCSPRLLVSPLNCTPSSLCHHYLASSGRVDEKKAFQCASVLDPCCTFIAGGMPSAYKIRLHNSGCRALRSILHLDVEKPANQWEEGLEIQWAPPPEPICRTQSDCTGASDCLPAGGSNSRSRCLCRRSYYWNHILGTCLRTNRKSMVRLSIKLSVCLVSFFILAAVIALITVRKSRTFSKQEKLCKEREDMLNLSHGVRPARMFHLKEMKKATNEFSKDRVLGSGGFGEVYKGELQDGTIVAVKSAKVGNLKSTEQILNEVGILSQVNHRNLVKLIGCCVETEQPLMIYEYISNGTLHDHLHGKIPSFLDWRKRLKIASQTAEALAYLHSAAYPPIYHRDVKSTNILLDDKFNAKVSDFGLSRLALPGISHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFTRDENCVNLAIYVIQKVQNGAFIDAIDKQLISDDPSSNILISVKHFLELALACLREKKVERPFMKDVLQELEYITQILDNPEIVAEEGKS 1236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34516333 34525596 + ClCG10G019580.2 Cla10g01861 283520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01861 1236 Coils Coil 92 119 - -
Cla10g01861 1236 ProSitePatterns Protein kinases ATP-binding region signature. 950 972 IPR017441 GO:0005524
Cla10g01861 1236 ProSiteProfiles Protein kinase domain profile. 944 1220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01861 1236 SMART serkin_6 944 1220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01861 1236 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 632 1230 - -
Cla10g01861 1236 Coils Coil 227 254 - -
Cla10g01861 1236 MobiDBLite consensus disorder prediction 295 316 - -
Cla10g01861 1236 SUPERFAMILY Protein kinase-like (PK-like) 920 1221 IPR011009 -
Cla10g01861 1236 MobiDBLite consensus disorder prediction 1 22 - -
Cla10g01861 1236 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 457 541 IPR001179 GO:0003755
Cla10g01861 1236 SUPERFAMILY FKBP-like 391 544 - -
Cla10g01861 1236 Coils Coil 147 167 - -
Cla10g01861 1236 Pfam Protein tyrosine and serine/threonine kinase 946 1217 IPR001245 GO:0004672|GO:0006468
Cla10g01861 1236 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1064 1076 IPR008271 GO:0004672|GO:0006468
Cla10g01861 1236 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 454 544 IPR001179 GO:0003755
Cla10g01861 1236 Coils Coil 276 296 - -
Cla10g01861 1236 Coils Coil 178 212 - -
Cla10g01861 1236 CDD STKc_IRAK 950 1218 - -
Cla10g01861 1236 Gene3D Transferase(Phosphotransferase) domain 1 1020 1231 - -
Cla10g01861 1236 Gene3D Phosphorylase Kinase; domain 1 914 1019 - -
Cla10g01861 1236 MobiDBLite consensus disorder prediction 295 331 - -
Cla10g01861 1236 Gene3D - 393 549 IPR046357 GO:0003755
Cla10g01861 1236 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 632 1230 IPR045274 GO:0007166
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00781 Cla-Chr4:22870003 Cla10g01861 Cla-Chr10:34516333 2.09E-177 dispersed
Cla05g02336 Cla-Chr5:34948131 Cla10g01861 Cla-Chr10:34516333 3.76E-09 dispersed
Cla09g00024 Cla-Chr9:290753 Cla10g01861 Cla-Chr10:34516333 1.30E-08 dispersed
Cla10g01861 Cla-Chr10:34516333 Cla11g00720 Cla-Chr11:10015383 1.33E-85 dispersed
Cla11g01840 Cla-Chr11:32008672 Cla10g01861 Cla-Chr10:34516333 2.18E-16 dispersed
Cla10g01861 Cla-Chr10:34516333 Cla11g00635 Cla-Chr11:7301962 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80883 PF07714 PK_Tyr_Ser-Thr 4.30E-47 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01861 - - csv:101221284 1122.07