Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01862 ATGGGTACCCATGGCCGAAGCAGTGAGCGGAAGAGAGAGAAGAAATCATCTTCACGGAGACGCAGCAGAAGAAGGTCCGATGACTCTGAATCTGATTCAGACGACTCAGATAGCTGCGATTCATCTCCTGTGGCTAGCTCCCGGAAGCGCAGGGAAAGACGGGATGGTAGCAGAAGCAGCCACCGGAGTAAGCGACGGAGCTCCTCTCGTGGGCGGGATTCCGGTGACGATAGTTCAAATGATAGTTATGACAGTGATGATGGAGGTCGCAAGAAGATTAAATCTTCGAGGAAAGTTACCGAAGAGGAAATTAGCGAATACTTGGCCAAGAAAGCGCAGAAAAAGGCCTTGCGAGTTGCTAAGAAATTGAAGTCACAGACGGTTTCTGGTTATTCTAACGATTCGAATCCATTTGGCGATTCGAATCTGAATGAAAAATTTGTTTGGCGAAAGAAAATTGAGCGCGATGTTACTCAAGGCGTTTCACTTGATGCCTTCTCGGTGAAGGCTGAGAAAAAAAGACAGAGAGAAAGAATGGCAGAGATTGAAAAGGTGAAGAAAAGAAGGGAGGAAAGGGCTCTTGAAAAAGCACAACATGAGGAAGAAATGGCATTGCTAGCTCGAGAGCGTGCTCGTGCTGAATTTCAGGACTGGGAGAAAAAGGAAGAAGAGTTTCATTTTGATCAAAGCAAAATCAGATCAGAGATAAGAGTTCGTGATGGGCGTTCGAAGCCTATAGATATTCTGTCCAAGCAGCTGAATGGGTCAGATGATTTTGATATAGTAATTAATGAGCCATACACTGTATTCAAGGGCTTGACTGTGAAAGAGATGGAGGAGCTTCGTGATGACATCAAAATGCATCTTGATCTGGACAGGGCGACACCTACACATATCGAGTATTGGGAGGCTCTTCTCGTGGTTTGTGATTGGGAACTAGCCGAAGCTCGAAAGAAGGATGCTCTGGATAGAGCCAGAGTTCGTGGTGAGGAGCCTCCTGCTGAGTTGCTTGCAGAAGAAAGGGGTCTGCATTCTAGCATTGAAACAGATGTCAAAAATCTGCTGGAAGGAAAGACTTATGGTGAATTGGAGGCATTACAATCTCAAATTGAGTCACAGATGCGATCTGGAACAGCAAAGGTGGTTGAGTACTGGGAGGCTGTCCTAAAGCGCCTTCATATATACAAGGCCAAGGCTTGCTTGAAGGAAATTCATACGAAAAAACTGCATGAGCATCTTGTACGTCTTGAGCAACCTTTCGAGGTTGATGAAGAACAGATAGAGCAGGAAATCAAGATGGAAACTGATCATTCTTTACAAGTGAAAGCTGATGATGATGAGCATGATATTGAAGAACCCCAAACATATTCGCCTGATCTCCTCGAGGAAGAAGATAATCAAGAGGCAGGTTCATTTTCACCAGAACTTATGCATGGTGATGAAGATGAAGAGGCTGTTGATCCTGAGGAGGATAGGGCCATACTGGAACGTAAGCGTGTTGCTGTCTTAGAAGAACAGCAGAGACGGATCCAAGAAGCAATGGCAACAAAACCTGCTCCAGTAGAGGATAATTTTGAACTGAAAGCCTCAAAAGCCATGGGAGTCATGGAGGAAGGCGATGCAGTTTTTGGATCTGGTGCTGAAGTGAACCTAGATTCACAGGTTTATTGGTGGCATGATAAATATCGTCCGAGAAAACCAAAATACTTCAATCGGGTTCATACGGGATATGAGTGGAACAAGTACAACCAGACTCACTATGATCATGACAATCCACCTCCAAAGATTGTGCAAGGATATAAGTTTAACATCTTCTATCCAGACCTTGTTGACAAGACAAAAGCTCCAACTTACACCATTGAGAAGGATGGAAACAGCAGCGAGACATGTATCATAAGGTTCCATGCAGGGCCACCATATGAGGATATTGCATTCCGAATTGTAAACAAAGAATGGGAATACTCTCATAAGAAGGGGTTCAAGTGCACATTTGAGCGTGGAATTTTGCACGTATACTTCAACTTTAAACGATATCGTTATCGCAGGTAA 2049 44.31 MGTHGRSSERKREKKSSSRRRSRRRSDDSESDSDDSDSCDSSPVASSRKRRERRDGSRSSHRSKRRSSSRGRDSGDDSSNDSYDSDDGGRKKIKSSRKVTEEEISEYLAKKAQKKALRVAKKLKSQTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVTQGVSLDAFSVKAEKKRQRERMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKKEEEFHFDQSKIRSEIRVRDGRSKPIDILSKQLNGSDDFDIVINEPYTVFKGLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEEPPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVLKRLHIYKAKACLKEIHTKKLHEHLVRLEQPFEVDEEQIEQEIKMETDHSLQVKADDDEHDIEEPQTYSPDLLEEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRVAVLEEQQRRIQEAMATKPAPVEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYRR 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34527777 34533139 - ClCG10G019590.1 Cla10g01862 283521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01862 682 Pfam Conserved mid region of cactin 208 405 IPR018816 -
Cla10g01862 682 Pfam Cactus-binding C-terminus of cactin protein 558 682 IPR019134 GO:0005515
Cla10g01862 682 SMART CactinC_cactus_3 558 682 - -
Cla10g01862 682 MobiDBLite consensus disorder prediction 433 491 - -
Cla10g01862 682 MobiDBLite consensus disorder prediction 1 102 - -
Cla10g01862 682 PANTHER BNAC05G02180D PROTEIN 1 682 - -
Cla10g01862 682 Coils Coil 172 216 - -
Cla10g01862 682 MobiDBLite consensus disorder prediction 69 102 - -
Cla10g01862 682 MobiDBLite consensus disorder prediction 433 455 - -
Cla10g01862 682 MobiDBLite consensus disorder prediction 54 68 - -
Cla10g01862 682 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 1 682 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01862 K25058 - csv:101205416 1164.44