Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01901 ATGGCCGCCTCAAATCTCACCTCCGGCAACCCATTCTGGCACCAGTTGTTCTTTGGGCGGTGGTTCTCTGTCTTTGCTTCCTTTCTCATCATGTCCGTCTCCGGCGCCAGCTTCATGTTTGCCCTTTACTCCTCCGACATCAAATCCTCATTAGGCTACGACCAAACCACCCTCAATTTACTCAGCTTCTTCAAGGACTTAGGCAGCAATGTCGGCATCATCAGCGGCCTCATCAACGAGGTCGCTCCGGCCTGGGTGGTTCTTCTAATCGGCGCCGTCATGAACCTTTTTGGCTACACCATGATTTGGCTGGCCGTAACCAATCGGATCCCCAAGCCCCAAATCTGGCATATGTGTCTTTACATTTGCATCGGAGCTAATTCTCAGACCTTTCCAAATACAGGGACTCTTGTAACCTCCGTCATAAATTTCCCGGAAAGTCGTGGTTGTGTTTTGGGGCTTTTGAAGGGATTCGTCGGCTTAAGCGGCGCCATTGTGTCCCAACTTTTCCATGCATTTTATGGCAACAACTCCAAATCTTTTATCCTCTTAATCGCCTGGCTTCCCGCCGCCATCTCTGTTATCTTCCTCCGTTTCATTCGCATCATTAAGGATCTCCGGCAGCCCAACGAGCTCAAAGTTTTTTACCATATCCTTTATATTTCTCTCGGCCTTGCAGGGACCTTAATGGTTTTAATTATTTTGCAAAATCATCTTCGATTTCAACAAATACAATATGTTGGAAGTGTCATTGTTGTGATTGTTCTGCTTTTACTACCTCTAGCCATCGTTTTCAGAGAGGAATATAGTGTTTGGAAGAGTAAAATCAAAAACCCAATTTCACAATTAGAGTTAGCGTCCCAACAACCGCCGCCGTCATTGACTTCAGGGATGCCACCGGCGCCACCGAGCCCTTCGTCGGGCTCCTGCTTTAAAAATACGTTTAAACCCCCAAGTAGAGGAGAGGACTACACGATTCCACAAGCAATTTTTAGCGTCGATATGATAATTCTTTTTATCACCACAATCTGTGGCATCGGTGGAACATTGACGGCGATGGACAACTTGGGCCAAATCGGGGAGTCTTTGGGGTATCCATCTCACAGTACCACCATATTCATCTCTCTAGTGAGCATATGGAATTACCTAGGTCGTGTAGTCTCCGGATTCTTATCGGATTACTTCTGGAAAAAGTACGAACTCCCACGTCCTTTGTTGCTCTTCGCGACGCTTATTCTGTCCTGCGTGGGTCATCTTCTAATCGCATTTGGAGTTCCGAATTCATTGTATTTTTCTTCAATCATATTCGGGTTATGCTTTGGCGCTCAGTGGCCCTTGATCTTAGCAATCATATCGGAAATATTTGGGTTGAAGTACTATGCAACTCTGTGCAATTTGGGAGGAGCGGCAAGCCCGATTGGGGCGTATATTATGAAAGTGAGAGTTGCAGGTCATTTTTACGACAGGGAGGCGGAGCGGCAGATGGTGGCTGCAGGGCAGCGGAGAAAAACAGTGGAGGACTTGAGTTGCTTGGGAGTGGAGTGTTACAGAAAGGCATTTCTTATAATCACAGGGGTGACGCTCTTGGGGGGACTTGTTTCCCTCATTTTGGTGGTTCGGACATGGAAGTTTTATAACACCAATATTTACAACAACTTCAAGGAGGAGGAAGGTGAAGGTGAAGGTGAAGGTGAAGGTGAAGATGTCGACATCAAAGTCGTCGCACCTACCGACAATGTGTTGACAACACCAAAAATTGAATCTATTTAG 1770 46.5 MAASNLTSGNPFWHQLFFGRWFSVFASFLIMSVSGASFMFALYSSDIKSSLGYDQTTLNLLSFFKDLGSNVGIISGLINEVAPAWVVLLIGAVMNLFGYTMIWLAVTNRIPKPQIWHMCLYICIGANSQTFPNTGTLVTSVINFPESRGCVLGLLKGFVGLSGAIVSQLFHAFYGNNSKSFILLIAWLPAAISVIFLRFIRIIKDLRQPNELKVFYHILYISLGLAGTLMVLIILQNHLRFQQIQYVGSVIVVIVLLLLPLAIVFREEYSVWKSKIKNPISQLELASQQPPPSLTSGMPPAPPSPSSGSCFKNTFKPPSRGEDYTIPQAIFSVDMIILFITTICGIGGTLTAMDNLGQIGESLGYPSHSTTIFISLVSIWNYLGRVVSGFLSDYFWKKYELPRPLLLFATLILSCVGHLLIAFGVPNSLYFSSIIFGLCFGAQWPLILAIISEIFGLKYYATLCNLGGAASPIGAYIMKVRVAGHFYDREAERQMVAAGQRRKTVEDLSCLGVECYRKAFLIITGVTLLGGLVSLILVVRTWKFYNTNIYNNFKEEEGEGEGEGEGEDVDIKVVAPTDNVLTTPKIESI 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34901361 34903130 + ClCG10G020000.1 Cla10g01901 283560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01901 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 563 - -
Cla10g01901 589 PANTHER MFS TRANSPORTER 9 563 - -
Cla10g01901 589 SUPERFAMILY MFS general substrate transporter 12 203 IPR036259 -
Cla10g01901 589 SUPERFAMILY MFS general substrate transporter 222 542 IPR036259 -
Cla10g01901 589 CDD MFS_Mch1p_like 19 530 - -
Cla10g01901 589 Gene3D MFS general substrate transporter like domains 329 546 IPR036259 -
Cla10g01901 589 Pfam Major Facilitator Superfamily 339 538 IPR011701 GO:0022857|GO:0055085
Cla10g01901 589 MobiDBLite consensus disorder prediction 286 312 - -
Cla10g01901 589 Pfam Nodulin-like 20 265 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00243 Cla-Chr3:2883090 Cla10g01901 Cla-Chr10:34901361 1.46E-38 dispersed
Cla04g00930 Cla-Chr4:24266568 Cla10g01901 Cla-Chr10:34901361 0 dispersed
Cla05g02172 Cla-Chr5:33294586 Cla10g01901 Cla-Chr10:34901361 1.15E-10 dispersed
Cla08g00796 Cla-Chr8:20364090 Cla10g01901 Cla-Chr10:34901361 0 dispersed
Cla10g01898 Cla-Chr10:34867960 Cla10g01901 Cla-Chr10:34901361 2.37E-26 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01901 - - csv:101216551 889.412