Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01940 ATGGCATACTTACTTAAAACCAGGAAGCTTCAAAAGCTCAACAATGGCGGCCAAGAACCATTTGAGCTTTATTCTTCTTGTTGTTCTTTTGCAGCTCTTCTATTCAGGGGGGAATTGCAAATTAATTATTATGCAAAAAGTTGCCCAAAAGCTGAAGAAATTATAAAACAGCAAGTTGTTGATCTCTACTATGAACATGGAAACACTGCCGTTTCTTGGCTCAGAAATCTCTTCCATGATTGCGTTGTTAAGTCTTGCGATGCATCTCTATTATTGGACACAGTGGTGGGAGTGGAATCAGAGAAAGATTCAGACAGAAGTTTTGGGATGAGAAATTTCAAGTACGTAAATAAGATCAAAGCTGCTGTTGAAAAAGAATGTCCTCTCACTGTTTCTTGTGCCGATATTGTTGCATTATCTGCGAGAGATGGCATAGTTATGTTAAAAGGGCCTCGTATAGAGTTGAAAACAGGGAGAAGAGACAGCAAAGTGAGTTATTCAAATCTTGTTGAAGAGTTGGTTCCAAAGCACAATGAATCTCTTCTAAATGTTCTCTCCCGCTTTAACTCCATTGGCATTGATACTGAAGCAACCGTCGCTCTTTTAGGAGCCCACTCAGTAGGACGAGTCCATTGTGTAAACTTAGTGGAGAGATTATATCCAACCATTGATCCAACCATTGATCCAGAATATGCAAAATACTTAAAACTTCGATGCCCGACGCCAAATCCTGATCCAAATGCAGTATTATATTCAAGAAACGACCGTGAAACTCCGATGGTTTTGGATAATATGTACTATACTAATATACTCAAACACAAGGGGTTGCTCATAGTGGATCAAGAATTGGCTTCTAATCCTTTAACTTTACCTTATGTCAAGAAATTTGCTGCCGATAATCTCTATTTTCATGCCCAATTCTCTAGGGGAATTCGTTTGTTGTCTGAGAATAATCCCCTCACTGGAGATCAAGGTGAGATTAGGAAAGATTGTCGCTTTGTTAATTAA 1008 38.79 MAYLLKTRKLQKLNNGGQEPFELYSSCCSFAALLFRGELQINYYAKSCPKAEEIIKQQVVDLYYEHGNTAVSWLRNLFHDCVVKSCDASLLLDTVVGVESEKDSDRSFGMRNFKYVNKIKAAVEKECPLTVSCADIVALSARDGIVMLKGPRIELKTGRRDSKVSYSNLVEELVPKHNESLLNVLSRFNSIGIDTEATVALLGAHSVGRVHCVNLVERLYPTIDPTIDPEYAKYLKLRCPTPNPDPNAVLYSRNDRETPMVLDNMYYTNILKHKGLLIVDQELASNPLTLPYVKKFAADNLYFHAQFSRGIRLLSENNPLTGDQGEIRKDCRFVN 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35241311 35245795 + ClCG10G020420.1 Cla10g01940 283599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01940 335 Gene3D Peroxidase, domain 2 175 314 - -
Cla10g01940 335 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 Gene3D - 42 335 - -
Cla10g01940 335 PANTHER PEROXIDASE 25-RELATED 29 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 Pfam Peroxidase 56 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 CDD secretory_peroxidase 38 334 IPR033905 GO:0004601|GO:0042744
Cla10g01940 335 ProSiteProfiles Plant heme peroxidase family profile. 38 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla10g01940 335 PANTHER PEROXIDASE 21 29 333 - -
Cla10g01940 335 SUPERFAMILY Heme-dependent peroxidases 38 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla04g00873 Cla10g01940 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g01940 Cla-Chr10:35241311 Cla01g01943 Cla-Chr1:34110056 3.85E-70 dispersed
Cla03g00443 Cla-Chr3:5022608 Cla10g01940 Cla-Chr10:35241311 2.01E-130 transposed
Cla10g01940 Cla-Chr10:35241311 Cla04g00873 Cla-Chr4:23740425 1.17E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01940 K00430 - csv:101215428 575.859