Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g01940 | ATGGCATACTTACTTAAAACCAGGAAGCTTCAAAAGCTCAACAATGGCGGCCAAGAACCATTTGAGCTTTATTCTTCTTGTTGTTCTTTTGCAGCTCTTCTATTCAGGGGGGAATTGCAAATTAATTATTATGCAAAAAGTTGCCCAAAAGCTGAAGAAATTATAAAACAGCAAGTTGTTGATCTCTACTATGAACATGGAAACACTGCCGTTTCTTGGCTCAGAAATCTCTTCCATGATTGCGTTGTTAAGTCTTGCGATGCATCTCTATTATTGGACACAGTGGTGGGAGTGGAATCAGAGAAAGATTCAGACAGAAGTTTTGGGATGAGAAATTTCAAGTACGTAAATAAGATCAAAGCTGCTGTTGAAAAAGAATGTCCTCTCACTGTTTCTTGTGCCGATATTGTTGCATTATCTGCGAGAGATGGCATAGTTATGTTAAAAGGGCCTCGTATAGAGTTGAAAACAGGGAGAAGAGACAGCAAAGTGAGTTATTCAAATCTTGTTGAAGAGTTGGTTCCAAAGCACAATGAATCTCTTCTAAATGTTCTCTCCCGCTTTAACTCCATTGGCATTGATACTGAAGCAACCGTCGCTCTTTTAGGAGCCCACTCAGTAGGACGAGTCCATTGTGTAAACTTAGTGGAGAGATTATATCCAACCATTGATCCAACCATTGATCCAGAATATGCAAAATACTTAAAACTTCGATGCCCGACGCCAAATCCTGATCCAAATGCAGTATTATATTCAAGAAACGACCGTGAAACTCCGATGGTTTTGGATAATATGTACTATACTAATATACTCAAACACAAGGGGTTGCTCATAGTGGATCAAGAATTGGCTTCTAATCCTTTAACTTTACCTTATGTCAAGAAATTTGCTGCCGATAATCTCTATTTTCATGCCCAATTCTCTAGGGGAATTCGTTTGTTGTCTGAGAATAATCCCCTCACTGGAGATCAAGGTGAGATTAGGAAAGATTGTCGCTTTGTTAATTAA | 1008 | 38.79 | MAYLLKTRKLQKLNNGGQEPFELYSSCCSFAALLFRGELQINYYAKSCPKAEEIIKQQVVDLYYEHGNTAVSWLRNLFHDCVVKSCDASLLLDTVVGVESEKDSDRSFGMRNFKYVNKIKAAVEKECPLTVSCADIVALSARDGIVMLKGPRIELKTGRRDSKVSYSNLVEELVPKHNESLLNVLSRFNSIGIDTEATVALLGAHSVGRVHCVNLVERLYPTIDPTIDPEYAKYLKLRCPTPNPDPNAVLYSRNDRETPMVLDNMYYTNILKHKGLLIVDQELASNPLTLPYVKKFAADNLYFHAQFSRGIRLLSENNPLTGDQGEIRKDCRFVN | 335 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 35241311 | 35245795 | + | ClCG10G020420.1 | Cla10g01940 | 283599 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g01940 | 335 | Gene3D | Peroxidase, domain 2 | 175 | 314 | - | - | |
Cla10g01940 | 335 | PRINTS | Plant peroxidase signature | 269 | 286 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | PRINTS | Plant peroxidase signature | 130 | 140 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | PRINTS | Plant peroxidase signature | 72 | 92 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | PRINTS | Plant peroxidase signature | 111 | 124 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | PRINTS | Plant peroxidase signature | 149 | 164 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | PRINTS | Plant peroxidase signature | 253 | 268 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | PRINTS | Plant peroxidase signature | 48 | 67 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | PRINTS | Plant peroxidase signature | 196 | 208 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | Gene3D | - | 42 | 335 | - | - | |
Cla10g01940 | 335 | PANTHER | PEROXIDASE 25-RELATED | 29 | 333 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | Pfam | Peroxidase | 56 | 299 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | PRINTS | Haem peroxidase superfamily signature | 255 | 270 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | PRINTS | Haem peroxidase superfamily signature | 197 | 212 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | PRINTS | Haem peroxidase superfamily signature | 70 | 84 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | PRINTS | Haem peroxidase superfamily signature | 131 | 148 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | PRINTS | Haem peroxidase superfamily signature | 149 | 161 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | CDD | secretory_peroxidase | 38 | 334 | IPR033905 | GO:0004601|GO:0042744 | |
Cla10g01940 | 335 | ProSiteProfiles | Plant heme peroxidase family profile. | 38 | 335 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla10g01940 | 335 | PANTHER | PEROXIDASE 21 | 29 | 333 | - | - | |
Cla10g01940 | 335 | SUPERFAMILY | Heme-dependent peroxidases | 38 | 335 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla04g00873 | Cla10g01940 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla10g01940 | Cla-Chr10:35241311 | Cla01g01943 | Cla-Chr1:34110056 | 3.85E-70 | dispersed | |
Cla03g00443 | Cla-Chr3:5022608 | Cla10g01940 | Cla-Chr10:35241311 | 2.01E-130 | transposed | |
Cla10g01940 | Cla-Chr10:35241311 | Cla04g00873 | Cla-Chr4:23740425 | 1.17E-90 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g01940 | K00430 | - | csv:101215428 | 575.859 |