Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01941 ATGTTGAATTTCTCTCCAATTTCCTCATCCATTACCTTCACATTACTTCTTTTTTCCTTTTCCAATACTGGCATTTTAGATTTCACCGCCACCGTTGCCGCCGTTGAATTTGACTTCGGCACTGTCGCCCTCAGTAGTTTAAAGCTACTCGGCGATGCCCACTTGAACAACGGGAGCGTGAGGCTCACTCGAGACCTTGCCGTCCCAAATTCCGGCTCCGGCAGAGTCCTCTACGCCAAACCCATCAGATTCCGGCAGCCAGGGATTAATTACCTCGCCAGTTTCTCCACATTTTTCTCCTTCTCCGTCACTAATCTCAACCCGTCGTCGATCGGTGGTGGTTTGGCGTTTGTGATATCTCCAGACGCCGAAACGCTCGGCGGAGCTGGTGGGTTGTTGGGGCTGGCCGATGAGAGGGGATTGGGGTTCGTGGCGGTGGAATTCGACACGTTAATGGATGTGGAATTTAAAGACATTAATGGAAACCATGTGGGATTGGATCTGAACGAAATGGTTTCGTTAGAGGTTAAAGATCTTGACGGAACTGGAATGGATCTCAAAAGCGGCGATACCGTTAATTCGTGGATTGAATACGACGGGTTGGCTCGGATCTTCAAAATCTTCGTTTCTTATTCGAATTTGAAACCGACAGAACCTCTAATGTCGTTCAATCTCGATCTTGATCCGTATTTGAACGATTTTATGTACGTTGGATTTTCCGGTTCAACACAGGGGAGTACGGAAGTTCACAGTGTGGACTGGTGGAGCTTTACGTCGTCGTTTGACTCAAATTCACCACCTGGGTCGGTTCCGCCGCCGCCAACGACGACGCTGATGAACCCAACGGCGAATGTCGTTCGTTCACCGCCGCCGTCGCAACCGCCATCGGATTCAGATTCCGTCACGCAAAAGAACTCCAAGTCGACGTCCTGCCACAATGGGCTCTGTAAGCAAGGCGCTGGTGCAGTGGTCGGAGTTGTGACCGCGGGGGCTTTTGTTCTAGCATTATTTGCCGGCGGTTTAATTTGGGTATATTCCAAAAAGATCAAGCGGGTTAAAAAATCGGATTCCCTCGCTTCAGAAATCATCAAAATGCCTAAGGAATTCACATACAAGGAGCTCAAAATCGCTACCAAATGCTTCAATTTGAACAGAATCATCGGCCATGGCGCTTTTGGGACTGTTTATAAAGGGATTCTGCCGGAGACCGGCGACATTGTGGCGGTGAAACGGTGCAGCCATAGTACACAAGGGAAAAATGAATTCCTCTCTGAACTTTCAATCATCGGAACTCTCCGCCACCGGAATTTAGTGCGTCTTCAAGGATGGTGTCACGAGAAAGGCGAAATTTTACTCGTTTACGATTTAATGCCAAATGGAAGTTTAGATAAAGCACTATTCGAAGCTAGAACGCCGCTGCCGTGGCCTCACCGGAGAAAAATCCTTCTAGGCGTCGCCTCTGCTTTGGCTTATTTGCATCAAGAATGTGAAAATCAAGTCATTCATAGAGACGTTAAAACCAGCAATATAATGTTGGATGAAGGATTCAATGCCCGATTAGGCGATTTCGGATTGGCCCGACAAGTGGAGCACGATAAATCGCCGGACGCTACCGTCGCCGCCGGTACAATGGGATACTTAGCGCCGGAATATCTCCTCACAGGACGAGCCACGGAAAAAACCGACGTGTTTAGCTTCGGCGCCGTCGTTCTCGAAGTCGCTAGCGGCAGACGGCCGATCGAAAAAGAGACTGCCGCCGTTGGCGGCGGCGGAAAATTCGGTGTCAACAGTAATTTGGTGGACTGGGTTTGGAGTTTACACCGGGAAGGCCGGTTGTTAACGGCGGCTGATGGGAGACTCGGCGGCGAGTTTGAGGAATCCGAGATGAGGAAAGTTTTGTTAGTTGGGTTAGCTTGTTCTCACCCGGATCCGATGACCCGACCCACGATGAGAGGCGTAGTGCAAATGTTAATCGGCGATGCGGAGATTCCGATCGTCCCTCGGTCTAAGCCGTCAACGAGCTTCAGTACTGCTCATTTGCTTCTCACTTTACAAGACAGCGTGTCCGATCTCAACGGCATGATCGCCATTTCCACTTCCTCGTCCGATCACAGCTTCAAGGGCGAGGATTTAATCTCACTGGATGATCGGACGGCGGGAAATCCATCAATTGTTTGA 2178 49.82 MLNFSPISSSITFTLLLFSFSNTGILDFTATVAAVEFDFGTVALSSLKLLGDAHLNNGSVRLTRDLAVPNSGSGRVLYAKPIRFRQPGINYLASFSTFFSFSVTNLNPSSIGGGLAFVISPDAETLGGAGGLLGLADERGLGFVAVEFDTLMDVEFKDINGNHVGLDLNEMVSLEVKDLDGTGMDLKSGDTVNSWIEYDGLARIFKIFVSYSNLKPTEPLMSFNLDLDPYLNDFMYVGFSGSTQGSTEVHSVDWWSFTSSFDSNSPPGSVPPPPTTTLMNPTANVVRSPPPSQPPSDSDSVTQKNSKSTSCHNGLCKQGAGAVVGVVTAGAFVLALFAGGLIWVYSKKIKRVKKSDSLASEIIKMPKEFTYKELKIATKCFNLNRIIGHGAFGTVYKGILPETGDIVAVKRCSHSTQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRRKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSFGAVVLEVASGRRPIEKETAAVGGGGKFGVNSNLVDWVWSLHREGRLLTAADGRLGGEFEESEMRKVLLVGLACSHPDPMTRPTMRGVVQMLIGDAEIPIVPRSKPSTSFSTAHLLLTLQDSVSDLNGMIAISTSSSDHSFKGEDLISLDDRTAGNPSIV 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35253192 35255369 + ClCG10G020430.1 Cla10g01941 283600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01941 725 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Cla10g01941 725 PANTHER - 20 705 - -
Cla10g01941 725 Pfam Legume lectin domain 36 264 IPR001220 GO:0030246
Cla10g01941 725 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 270 IPR013320 -
Cla10g01941 725 ProSitePatterns Protein kinases ATP-binding region signature. 387 410 IPR017441 GO:0005524
Cla10g01941 725 SUPERFAMILY Protein kinase-like (PK-like) 363 687 IPR011009 -
Cla10g01941 725 Gene3D Transferase(Phosphotransferase) domain 1 457 663 - -
Cla10g01941 725 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 20 705 - -
Cla10g01941 725 SMART serkin_6 381 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01941 725 ProSiteProfiles Protein kinase domain profile. 381 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01941 725 CDD STKc_IRAK 387 657 - -
Cla10g01941 725 Gene3D - 32 268 - -
Cla10g01941 725 Pfam Protein kinase domain 382 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01941 725 CDD lectin_legume_LecRK_Arcelin_ConA 35 261 IPR001220 GO:0030246
Cla10g01941 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
Cla10g01941 725 MobiDBLite consensus disorder prediction 261 308 - -
Cla10g01941 725 Gene3D Phosphorylase Kinase; domain 1 343 456 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g00420 Cla-Chr10:5652017 Cla10g01941 Cla-Chr10:35253192 0 dispersed
Cla10g01941 Cla-Chr10:35253192 Cla10g00790 Cla-Chr10:15972157 5.72E-132 dispersed
Cla10g01941 Cla-Chr10:35253192 Cla10g02025 Cla-Chr10:36020308 5.50E-134 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80884 PF00069 Pkinase 6.20E-50 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01941 - - bhj:120091585 1317.75