Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g01958 ATGGACGCCAAGCTTCTGCTTCTGCTTCTGCTTCTTCTCTTTCTGTTGGACGTCTCCTTTTCTCAGATGCCAGGTTTTGTGAGTTTGGACTGTGGAGGTCAAGAAAGTTTCACTGATGATATTGGTCTGGAGTGGGTTCCAGATACTCAAGTTCGTTTTGGAGAAGCAATTAACATTTCTGTTGCAAATGAGACAAGGAAGCAATATATGACTTTAAGACACTTTCCTGCTGATTCCAGGAAGTACTGTTACTCACTCAATGTCACTAGTAGAACACGTTACCTTCTCAGAGCAACATTTTTATATGGCAACTTCGACAATAACAACGTGTATCCAAAATTTGACATTTCCCTTGGGGCAACTCACTGGGCAACAATTGTCATATCTGACGCCAACACTATCGAGGTTCGAGAGCTCATATTTCTGGCTTCTACTCCTACTGTAAGCGTTTGTTTGTCAAATGCTACAACTGGACAGCCATTCATATCCACACTTGAGCTTCGGCAATTTAATGGCTCTATCTACTATACTGAATTTGAGGATCAGTTTTACCTGAGTGTCTCAGCAAGGATTAATTTTGGAGCAGATTCCGAAGCTCCAGTAAGGTATCCTGATGATCCATTTGACCGGATATGGGAGTCGGACTCTGTGAGAAAAGCAAATTACCTTGTTGATGTTGCTGCTGGTACAGAAAAAGTTTCCACTAAATTACCGATAGATGTAGATAGAGATGAAAGACCACCTCAAAAAGTAATGCAGACAGCTGTAGTTGGCAGAAATGGTTCATTAACTTACCGGTTAAATTTGGATGGTTTTCCTGGCTTTGGATGGGCAGTCACCTACTTTGCAGAAATTGAAGACTTGGGTCCAACTGATACAAGAAAATTCAGGCTTGTACTTCCCGGAATGCCTGATATCAGCAAAGCTGTAGTCAACATTGAAGAAAATGCTCAAGGAAAATATCGGCTTTACGAGCCTGGTTTTACCAACTTAACCTTGCCTTTTGTATTATCTTTTCGGTTTGGGAAAACATCAGATTCTTCATTGGGACCTCTGTTAAATGCTATGGAGATTAACAAGTATCTTGAAAAAAGTGATGGTTCTCTAGATGGAGCAGTTGTTGCTAGTGTAATTTCAAAATTTTCATCTTCAGATTGGGATGAAGGTGGTGATCCATGCATGCCAGTTCCTTGGTCATGGTTGCAATGTAACTCTGATCCACGGCCAAGAATAGTTAAAATTTCATTGTCCAAAAAGAATTTGACGGGGAACATCCCTACAGACCTTGCAAAGTTGAGCGGTTTAGTTGAATTATGGCTTGATGGAAATTCATTTGTTGGTCCTATACCTGATTTTACTGGATGCGTGGACTTGAAAATCCTCCATCTTGAGAACAACCAGTTGACTGGAGAGCTACCTTCCTCTTTAGCAAATCTACCAAATTTACGGGAGCTGTATGTGCAGAATAACATGTTATCTGGAACAGTGCCCTCTGGTCTTCTCAATAAAAACCTAGTTTTTGACTACTCTAGAAACATTAATCTTCACGAAGGGGGAAAAAAAAACCACGTTTATATCATTGTGGGTTCAATAATTGGTGCTGTTGTCCTGCTGTTGGCTACTGTGGTATCTTGCTACTTCTTGCAAAAAGGAAGAAAACGATATCGTGAACAAGATCTACTTGAAGAATCATCCTTGCCTGTACAAAGATTTGCCTCTTCAAAGGGTGATGCCCCCAAGGAAACCGCACATTGCTTCAGTGTTATTGAAATTGTAGAAGCAACAAGAGATTTTGAAAGAAAAATTGGGTCTGGAGGTTTTGGTGTTGTATACTATGGGAAATTAAATGACGGAAAAGAAATTGCAGTTAAAGTTTTGACTAGTAATTCCTTTCAGGGAAGACGAGAATTTGCAAACGAGGTGACTCTTCTTTCAAGGATTCATCACAGAAATCTTGTACAATTTCTGGGATATTCTCAAGAACAGGACAGAAGTATGCTTGTCTATGAGTTCATGCATAATGGAACTCTCAAAGAACATCTTTATGGTCCACTAACACGGGAAAAAACTATCAGTTGGATAAAGCGCCTCGAGATTGCTGAGGATGCTGCTAGAGGGATTGAGTACCTTCATACAGGCTGTATTCCAGCAATTATTCATAGGGACTTGAAAAGCAGTAATATTCTTCTTGACAGGCACATGAAAGCAAAGGTTTCAGACTTTGGTCTCTCAAAGCTTGCGGTGGATGGTGCCTCCCATGTGTCCAGCATCGTTCGGGGAACTGTAGGATATTTGGACCCAGAGTATTATATCTCTCAGCAGTTAACAGACAAGAGCGATGTATATAGTTTTGGTGTTATTCTTCTCGAGTTGATATCTGGTCAAGAAGCTATATCTAATGTAAACTTTGGTGTTAATTGCCGCAACATCGTCCAGTGGGCAAAATTACACATTGAGAGCGGGGACATTCAAGGGATCATCGATCCGTCGCTGCGCAATGAATATGACATTCAATCAATGTGGAAAATCGCAGAGAAAGCGTTGATGTGTGTCCAGCCACATGGGCACCTTAGGCCATCCATATCTGAAGTGCTGAAGGAGATACAGGATTCAATTTTGATTGAAAGGGAAGCTACTGCAACTAGAGAAGGTAACTCTGATGACATGTCTAGAAACTCAGTCCATTCCATGAATATGGGATCTCTTGATTTGTGTGGAAACGAAAACTACGTGTCATTTGACGAGTCCATTGCTCGACCTACTGCAAGGTAG 2772 40.95 MDAKLLLLLLLLLFLLDVSFSQMPGFVSLDCGGQESFTDDIGLEWVPDTQVRFGEAINISVANETRKQYMTLRHFPADSRKYCYSLNVTSRTRYLLRATFLYGNFDNNNVYPKFDISLGATHWATIVISDANTIEVRELIFLASTPTVSVCLSNATTGQPFISTLELRQFNGSIYYTEFEDQFYLSVSARINFGADSEAPVRYPDDPFDRIWESDSVRKANYLVDVAAGTEKVSTKLPIDVDRDERPPQKVMQTAVVGRNGSLTYRLNLDGFPGFGWAVTYFAEIEDLGPTDTRKFRLVLPGMPDISKAVVNIEENAQGKYRLYEPGFTNLTLPFVLSFRFGKTSDSSLGPLLNAMEINKYLEKSDGSLDGAVVASVISKFSSSDWDEGGDPCMPVPWSWLQCNSDPRPRIVKISLSKKNLTGNIPTDLAKLSGLVELWLDGNSFVGPIPDFTGCVDLKILHLENNQLTGELPSSLANLPNLRELYVQNNMLSGTVPSGLLNKNLVFDYSRNINLHEGGKKNHVYIIVGSIIGAVVLLLATVVSCYFLQKGRKRYREQDLLEESSLPVQRFASSKGDAPKETAHCFSVIEIVEATRDFERKIGSGGFGVVYYGKLNDGKEIAVKVLTSNSFQGRREFANEVTLLSRIHHRNLVQFLGYSQEQDRSMLVYEFMHNGTLKEHLYGPLTREKTISWIKRLEIAEDAARGIEYLHTGCIPAIIHRDLKSSNILLDRHMKAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNVNFGVNCRNIVQWAKLHIESGDIQGIIDPSLRNEYDIQSMWKIAEKALMCVQPHGHLRPSISEVLKEIQDSILIEREATATREGNSDDMSRNSVHSMNMGSLDLCGNENYVSFDESIARPTAR 923
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35410589 35418246 - ClCG10G020610.2 Cla10g01958 283617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g01958 923 ProSiteProfiles Protein kinase domain profile. 596 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01958 923 SMART serkin_6 596 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01958 923 Gene3D Transferase(Phosphotransferase) domain 1 672 894 - -
Cla10g01958 923 PANTHER OS07G0107800 PROTEIN-RELATED 10 909 - -
Cla10g01958 923 SUPERFAMILY L domain-like 395 502 - -
Cla10g01958 923 Gene3D Ribonuclease Inhibitor 374 520 IPR032675 -
Cla10g01958 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 718 730 IPR008271 GO:0004672|GO:0006468
Cla10g01958 923 Pfam Protein kinase domain 599 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g01958 923 SUPERFAMILY Protein kinase-like (PK-like) 584 868 IPR011009 -
Cla10g01958 923 Pfam Malectin-like domain 29 359 IPR024788 -
Cla10g01958 923 ProSitePatterns Protein kinases ATP-binding region signature. 602 624 IPR017441 GO:0005524
Cla10g01958 923 Gene3D Phosphorylase Kinase; domain 1 571 671 - -
Cla10g01958 923 CDD STKc_IRAK 602 869 - -
Cla10g01958 923 PANTHER TYROSINE KINASE DOMAIN PROTEIN 10 909 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g00140 Cla-Chr6:1604412 Cla10g01958 Cla-Chr10:35410589 8.53E-135 dispersed
Cla08g00253 Cla-Chr8:5230953 Cla10g01958 Cla-Chr10:35410589 3.57E-67 dispersed
Cla09g00838 Cla-Chr9:8596011 Cla10g01958 Cla-Chr10:35410589 5.37E-130 dispersed
Cla10g01958 Cla-Chr10:35410589 Cla11g01631 Cla-Chr11:30002694 2.24E-141 dispersed
Cla10g01958 Cla-Chr10:35410589 Cla05g02627 Cla-Chr5:37465029 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80885 PF12819 Malectin_like 1.60E-77 CL0202 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g01958 - - csv:101212456 1752.64