Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g01964 | ATGATTTGGATTCCTTGTTCTGGAAATTCAAACAGGAAACTCAAGTCCAAGAAATTGAAGAAGTTGGAATCTCAGAAGACTCGAGTTGATCCGATCAACGGCGGTACTTTAATAAGCCATCTGGTTTTTGAAATCTACTTTGAATTTTGCTCTGCATTGAAGCTGTATAATAAACTTCTTCAGTACAATGGCGATTTCAGGACTGACGGGAAACTAAAAACAAATTCCTCCTTCAGTGAAAACTCCAAAGGTGGAGGATCTGATCCTATCAAGGCACAGATATTTTCCTTCCGGGAGTTGGCAGCTGCTACCAGGAATTTTAGGGCAGACTGTCTTTTGGGAGAAGGAGGTTTTGGTAGAGTTTACAAGGGAAAGTTAGAAAGCATCAATCAGGTTGTGGCAATCAAACAACTCGATCGCAATGGGTCGCAAGGGAACAGAGAGTTTCTTGTTGAAGTATTGATGTTAAGCCTGCTTCATCACCCAAATCTAGTTAATCTGATCGGTTATTGTGCTGATGGAGATCAAAGGCTTCTGATATATGAATATATGCCTCTAGGATCTTTAGATGACCATTTACATGACATTTCACCTGGTACAAAGGTTCTAGATTGGAATACAAGGATGAAAATAGCTGCTGGGGCAGCACGAGGGTTGGAATATTTGCATGACAAAGCTAGCCCGCCGGTTATTTATCGAGATTTAAAAAGTTCCAACATTCTGCTTGATAAAGGTTATCATCCCAAACTATCTGATTTTGGATTGGCCAAACTTGGGCCTGTTGGGGATAATACACATGTATCTACCAGAGTTATGGGTACTTACGGATATTGCGCTCCCGAGTATGCAATGACTGGTCAGTTAACTCTCAAGTCGGATGTTTATAGCTTCGGTGTTGTCCTTCTAGAAATCATAACAGGCAGGAAAGCAATTGATGATTCAAGAGCTGCAGGGGAGCAGAATCTGGTTTCTTGGGCAAGACCATTATTTAAAGACCGTCTGAGATTTGCTCAAATGGCAGATCCAATGCTTAGAGGCCAATACCCTTCAAGGGGTTTGTATCAGGCTCTTGCAATTGCAGCAATGTGTGTTCAAGAGCAGCCAAATATGCGACCCGTAATTGCCGATGTCGTCACAGCTTTATCTTATCTTGCTTCCCAAAGATACAACCCTGGTACGAACATACCCCACGACTCCCCTGGATCTGCTTGTACTCCTCCAAGAACCAACAGAGATTCTGATAGGAAGGTTAATGGGGGTAGAAGATACGACAGAAATCCAACTAAACGACTATAA | 1296 | 42.21 | MIWIPCSGNSNRKLKSKKLKKLESQKTRVDPINGGTLISHLVFEIYFEFCSALKLYNKLLQYNGDFRTDGKLKTNSSFSENSKGGGSDPIKAQIFSFRELAAATRNFRADCLLGEGGFGRVYKGKLESINQVVAIKQLDRNGSQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLIYEYMPLGSLDDHLHDISPGTKVLDWNTRMKIAAGAARGLEYLHDKASPPVIYRDLKSSNILLDKGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDDSRAAGEQNLVSWARPLFKDRLRFAQMADPMLRGQYPSRGLYQALAIAAMCVQEQPNMRPVIADVVTALSYLASQRYNPGTNIPHDSPGSACTPPRTNRDSDRKVNGGRRYDRNPTKRL | 431 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 35470374 | 35473735 | + | ClCG10G020680.2 | Cla10g01964 | 283623 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g01964 | 431 | Gene3D | Phosphorylase Kinase; domain 1 | 80 | 183 | - | - | |
Cla10g01964 | 431 | CDD | STKc_IRAK | 113 | 381 | - | - | |
Cla10g01964 | 431 | Gene3D | Transferase(Phosphotransferase) domain 1 | 184 | 395 | - | - | |
Cla10g01964 | 431 | MobiDBLite | consensus disorder prediction | 409 | 431 | - | - | |
Cla10g01964 | 431 | ProSitePatterns | Protein kinases ATP-binding region signature. | 113 | 136 | IPR017441 | GO:0005524 | |
Cla10g01964 | 431 | MobiDBLite | consensus disorder prediction | 392 | 408 | - | - | |
Cla10g01964 | 431 | ProSiteProfiles | Protein kinase domain profile. | 107 | 384 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g01964 | 431 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 230 | 242 | IPR008271 | GO:0004672|GO:0006468 | |
Cla10g01964 | 431 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED | 1 | 419 | - | - | |
Cla10g01964 | 431 | MobiDBLite | consensus disorder prediction | 392 | 431 | - | - | |
Cla10g01964 | 431 | PANTHER | OS07G0668900 PROTEIN | 1 | 419 | - | - | |
Cla10g01964 | 431 | SMART | serkin_6 | 107 | 384 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla10g01964 | 431 | Pfam | Protein tyrosine and serine/threonine kinase | 112 | 380 | IPR001245 | GO:0004672|GO:0006468 | |
Cla10g01964 | 431 | SUPERFAMILY | Protein kinase-like (PK-like) | 90 | 381 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g00205 | Cla-Chr3:2310996 | Cla10g01964 | Cla-Chr10:35470374 | 0 | dispersed | |
Cla05g00626 | Cla-Chr5:5770602 | Cla10g01964 | Cla-Chr10:35470374 | 0 | dispersed | |
Cla09g00842 | Cla-Chr9:8661899 | Cla10g01964 | Cla-Chr10:35470374 | 9.80E-167 | dispersed | |
Cla10g00517 | Cla-Chr10:6839670 | Cla10g01964 | Cla-Chr10:35470374 | 5.06E-166 | dispersed | |
Cla10g01964 | Cla-Chr10:35470374 | Cla11g01825 | Cla-Chr11:31921672 | 5.44E-158 | dispersed | |
Cla01g00115 | Cla-Chr1:1015685 | Cla10g01964 | Cla-Chr10:35470374 | 2.92E-55 | transposed | |
Cla03g00818 | Cla-Chr3:10425546 | Cla10g01964 | Cla-Chr10:35470374 | 3.05E-66 | transposed | |
Cla05g02574 | Cla-Chr5:36971065 | Cla10g01964 | Cla-Chr10:35470374 | 2.64E-66 | transposed | |
Cla10g01964 | Cla-Chr10:35470374 | Cla02g02022 | Cla-Chr2:35223744 | 1.02E-35 | wgd | |
Cla10g01964 | Cla-Chr10:35470374 | Cla02g01354 | Cla-Chr2:27804754 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80886 | PF07714 | PK_Tyr_Ser-Thr | 1.80E-46 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g01964 | - | - | csv:101211491 | 717.227 |