Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g02025 ATGGCCCAACTCTGTTTTCTCTGTTTCTTCTTCTTCCTCTGCGTCGCCGGCCCCGCCGCATCTCAGCAGCTCTACTTCGCTGGATTTCATGACGCCGCCGCCACCGCCGCCAACTTAACCCTCACTGACATCGCCAAGATCGAGCAGAACGGAATCTTAAAGCTCACAAATGACACCAGTCGATTACAGGGTCATGCCTTTTACAGTTCCCCTGTTCGCTTCAAAAACTCTTCCGACGGCAAAGCTTTTTCCTTCTCCACCGCTTTTGTCATCGCCGTCGTCCCCGAATACCCGACTCTAGGCGGCCATGGACTCGCCTTCACCATTGCCCATTCGAAGAACCTCCGTGGACTTCCCAGTCAGTATTTAGGCCTTCTCAATGCGACCGACGTCGGAAACTTCACGAACCATCTCTTCGCCGTCGAGTTCGACACCGTTCAAGATTTTGAGTTCGGCGACATCAACGACAACCACGTCGGAATCAATCTCAACAATATGGTTTCTAATGCCTCCACCACCGCTTCCTATTTCGTCGACGATGGACCCAACAAGCAGAATCTAACCCTAAAAAGTGGGAGGCCGATTCAAGCTTGGATCGATTACGATTCCTCTGTAAATTCACTCACGGTTGCGCTTTCTCCGTTTTCAACCAAACCCAAGAAGCCGATTCTGTCGTTTAATGTAGATCTCTCTCCGATTCTTCAGGAGTCTATGTACGTTGGGTTCTCGGCCTCAACTGGGCTTCTTGCAAGTTCGCACTATGTGTTGGGATGGAGTTTCAGTATGAATGGACCAGCTGAGTCTCTGGATCTGTCTTCTTTGCCTTCTGTTCCAGGTCCGAAGAAGAAGCACACTGGTTTTACAATTGGGGTTTCTGTTGCGGCCGTTTTGATTGTGGTAATCGCGATTTGTGTTGCTGTTTTAATCATTTGGAAGATAAAAAACGCTGATATAATCGAGGCCTGGGAGCACGAAATCGGCCCTCATCGGTACTCTTACAAGGAGCTTAAGCAAGCGACTAAGCGATTTAGGGATAAAGAGCTCTTAGGGCGCGGTGGGTTTGGGAAAGTTTACAAAGGGACTTTGCCGAATTCGAAAACCCAAGTGGCTGTGAAGCGGATTTCTCACGAATCGAAACAGGGCCTAAGGGAATTTGTGTCGGAAATCGCTAGCATTGGCCGGCTTCGTCACCGGAACTTGGTTCAGTTGCTGGGATGGTGTCGCCGCCGTGGCGATCTGCTTCTGGTTTATGATTTCATGGCTAATGGGAGCTTGGATAACTACATTTTCGACGACCCGGATGTGAATCTGAGTTGGGAACAAAGGTTCAGAATCATTAAGGGCGTCGCCTCCGGTTTGCTCTACTTGCACGAAGGCTACGAGCAGGTTGTGGTGATTCATAGAGATGTGAAAGCCAGTAATGTCCTGCTCGACGGCGAGATGAATGGGAAGCTCGGCGATTTCGGCCTGGCTCGACTATACGAACACGGGGCAAACCCGAGCACGACTCGGGTCGTCGGCACTCTGGGATATCTGGCGCCGGAGTTACCCAGAACAGGGAAGGCCACCACCAGCTCAGATGTGTATGCCTTCGGCGCACTTCTGCTAGAAGTGGCTTGCGGACGGCGGCCGATCGACCCGAAATCGTCGTCGGAAGAGCTAGTGCTGGTGGATTGGGTGTGGGAGAATTACAGGGAAGGGAAATTGCTGGAAGTAATGGATCCAAAATTGAAAGGGGATTTCAATGTAGCTGAGGCAGTGATGATTTTGAAGCTGGGGTTGTTCTGTTCGAACGATTCGGCGGCGGCGCGGCCTACTATGAGGCAGGTGGTGAGGTTTCTGGAGGGGGAGATTGGAGTTCCTGAGGAGATATCAGCGCCGAAAGTGGTGGAAGGAGGGAGGAATGGTGAAGGGTTCGATGATTTTGTGAATTCATTTGCATCTTCTTCCTTTAACAAGTTTAGTTCTTATTCATCGACTGGAAATAGGGATATGGATATGAGTTTTGCTTCATTTTCAACTTCTCCTCTTTCACTTCTCAACGGCAGAGACTAA 2055 50.27 MAQLCFLCFFFFLCVAGPAASQQLYFAGFHDAAATAANLTLTDIAKIEQNGILKLTNDTSRLQGHAFYSSPVRFKNSSDGKAFSFSTAFVIAVVPEYPTLGGHGLAFTIAHSKNLRGLPSQYLGLLNATDVGNFTNHLFAVEFDTVQDFEFGDINDNHVGINLNNMVSNASTTASYFVDDGPNKQNLTLKSGRPIQAWIDYDSSVNSLTVALSPFSTKPKKPILSFNVDLSPILQESMYVGFSASTGLLASSHYVLGWSFSMNGPAESLDLSSLPSVPGPKKKHTGFTIGVSVAAVLIVVIAICVAVLIIWKIKNADIIEAWEHEIGPHRYSYKELKQATKRFRDKELLGRGGFGKVYKGTLPNSKTQVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDNYIFDDPDVNLSWEQRFRIIKGVASGLLYLHEGYEQVVVIHRDVKASNVLLDGEMNGKLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGKATTSSDVYAFGALLLEVACGRRPIDPKSSSEELVLVDWVWENYREGKLLEVMDPKLKGDFNVAEAVMILKLGLFCSNDSAAARPTMRQVVRFLEGEIGVPEEISAPKVVEGGRNGEGFDDFVNSFASSSFNKFSSYSSTGNRDMDMSFASFSTSPLSLLNGRD 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36020308 36023064 - ClCG10G021350.2 Cla10g02025 283684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g02025 684 Pfam Legume lectin domain 23 274 IPR001220 GO:0030246
Cla10g02025 684 CDD lectin_legume_LecRK_Arcelin_ConA 45 264 IPR001220 GO:0030246
Cla10g02025 684 Gene3D Transferase(Phosphotransferase) domain 1 420 629 - -
Cla10g02025 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Cla10g02025 684 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Cla10g02025 684 SUPERFAMILY Protein kinase-like (PK-like) 324 627 IPR011009 -
Cla10g02025 684 SMART serkin_6 343 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g02025 684 ProSiteProfiles Protein kinase domain profile. 343 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g02025 684 CDD STKc_IRAK 349 616 - -
Cla10g02025 684 PANTHER - 5 672 - -
Cla10g02025 684 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 5 672 - -
Cla10g02025 684 Pfam Protein kinase domain 344 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g02025 684 Gene3D - 22 263 - -
Cla10g02025 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 282 IPR013320 -
Cla10g02025 684 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla04g00789 Cla10g02025 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00787 Cla-Chr4:22939201 Cla10g02025 Cla-Chr10:36020308 0 dispersed
Cla04g00789 Cla-Chr4:22957023 Cla10g02025 Cla-Chr10:36020308 0 dispersed
Cla10g00790 Cla-Chr10:15972157 Cla10g02025 Cla-Chr10:36020308 2.86E-133 dispersed
Cla02g00321 Cla-Chr2:3113172 Cla10g02025 Cla-Chr10:36020308 8.05E-114 transposed
Cla03g00570 Cla-Chr3:6366300 Cla10g02025 Cla-Chr10:36020308 5.58E-166 transposed
Cla06g01695 Cla-Chr6:30553401 Cla10g02025 Cla-Chr10:36020308 6.64E-169 transposed
Cla07g00266 Cla-Chr7:2951948 Cla10g02025 Cla-Chr10:36020308 6.09E-98 transposed
Cla08g00124 Cla-Chr8:2471660 Cla10g02025 Cla-Chr10:36020308 0 transposed
Cla08g00674 Cla-Chr8:19024253 Cla10g02025 Cla-Chr10:36020308 2.12E-109 transposed
Cla10g00420 Cla-Chr10:5652017 Cla10g02025 Cla-Chr10:36020308 7.57E-136 transposed
Cla10g00440 Cla-Chr10:5915204 Cla10g02025 Cla-Chr10:36020308 3.56E-11 transposed
Cla10g01941 Cla-Chr10:35253192 Cla10g02025 Cla-Chr10:36020308 5.50E-134 transposed
Cla10g02115 Cla-Chr10:36830202 Cla10g02025 Cla-Chr10:36020308 2.74E-26 transposed
Cla10g02025 Cla-Chr10:36020308 Cla04g00731 Cla-Chr4:22323911 8.61E-09 wgd
Cla10g02025 Cla-Chr10:36020308 Cla04g00786 Cla-Chr4:22933749 3.32E-73 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80888 PF00069 Pkinase 2.00E-45 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g02025 - - csv:101223168 1243.02