Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g02086 ATGAAGTCAAGATCTGACGAATTTCAGAAGTTTCACAGCAAGCAAATGTGTGGCACTGGCACATATCGGATGACGAAAGCATCATGGATACGCTTTCTTCATCCAATGGCCATAATTTTCCTACCCGATTTAATTCCCCAAACAGCAATCAAATTCCCCCTTCCAGCTCTATATTACACCTTCAGACTCCAATCCCTCACAACCACCTACTATCTCTCCGCTATGGCCGCCACCGCATCCTCCTTCATTGGAACTCGTCTTCCTATTGCCCCATCCGGGTCGGGTCGGGTACACGCCAGATTCTCATTCGGCAAACCAAAAAGCGCACCGAAGAAATCGTCAAAAAAGCCCACTTCGGACCGGCCGCTGTGGTACCCGGGGGCCGTGGCGCCGGAGTGGCTGGACGGAAGCTTGGTGGGGGATTACGGGTTCGACCCGTTTGGGCTGGGAAAACCGGCGGAGTACTTGCAGTTCGACTTGGACTCATTGGACCAGAACTTGGCTAAGAATGTGGCTGGTGATGTGATCGGTACTCGGTTCGAGAATGCGGATGTGAAATCGACGCCGTTCCAGCCGTACAGTGAGGTGTTTGGGTTGCAGAGGTTTCGCGAGTGTGAGCTGATCCATGGAAGGTGGGCTATGTTGGCTACACTCGGTGCCCTTACTGTTGAGTGGCTCACTGGTGTAGAGCTGGTGGAAGGATCCTCATATCTTGGGCAGCCACTTCCATTCTCCATATCAACATTGATATGGATAGAGGTTCTAGTAATTGGGTACATTGAGTTTCAAAGGAATGCTGAGCTTGATCCAGAGAAGAGACTTTACCCTGGGGGCAAGTACTTTGATCCCCTTGGCTTAGCGGCCGACCCCGAGAAGAAGGCGACGCTTCAATTGGCCGAGATTAAGCACGCTCGCCTCGCCATGGTCGCGTTCCTCGGTTTTGCTGTTCAAGCTGCTGCCACTGGCAAAGGCCCCCTCAATAACTGGGCAACCCATCTGATCTTCAATTGTTCCGACGCCGTTAAGGAAGAATTCCTCAGGCATTTGGCTCCTCACCGGAAGCTTGCGGTTCCTTTCCTGACCTTCTACTTCACACTTGATATGCATCCATTTGGGGTTACGGTTTCGGATCGTTATGCGAGTGTTGTTCCTATCCGAGGTGCTTCAATGTCTCCCACTTTTAATCCTAGAGCGACTTCTCTGGCAGGACCAGTAACTGGTGACTACGTGCTGGTTGAGAAATTTTGCCTTCAGAAGTATAAATTTTCTCCCGGTGACGTGATTGTTTACCGCTCCCCTTGTAATTACAAGGAGAACCATGTGAAAAGAATTATTGCCTTACCAGGAGATTGGGTTGGAACTCGTCAAACATATGATGTTGTCAAGGTTCCAGAAGGACATTGTTGGGTTGAAGGTGACAATGCAGAATGCAGCATGGACTCGAGATCTTTTGGCCCGGAATGGATTTTGATCTTTTCAGTTTTCACAACTATGGAAAATCTGCTGGATCAAAGTCTTCGATGCGGTCGCTCCTCATTTCCCGCTAGATTTTCATCTCGAAATCGCATCTCAAGCCTACGCTGGGTTCAACCACTAGTCGAGTTATCGAATTTTCGCGTTAGTTATTTGAGAAGTCGCCGAAGACCGCCGCCCGTCAATTTGCAAAACAGCCTTTTATCTCATGGGACAGACGGCAGGTTTGCATTCGCAAGAATTGCTGTTACCAACAATGTACGCCTCTTTTCTTATAATTCACTGAGGTCAGCAACTAGGAATTTTCATCCATCAACCAGAATAGGTGCTGGAGGTTATGGAGTTGTCTACAAAGGAGTTTTAAGGGATGGCACCAATGTTGCAGTCAAATCACTGTCTGCAGAATCAGCTCAGGGAACTCGTGAATTCTTAACCGAGATAAATATGATATCAAATATAAGACATCAACATCTCGTTGAACTGATTGGTTGTTGTGTAGAAGGCACACATCGAATTTTGGTGTATGAATACCTGGAAAACAACAGCCTTGCGAGTACTTTGCTTGGTACAATGAGTAAGCATGTCATTCTGGATTGGCCAAAGAGAGCTAAGATTTGTCTTGGTACAGCTTTGGGTCTTGCATACCTACATGAAGAAGCTGAATATTCTGTTGTTCATAGAGATATCAAGGCTAGCAATATACTTCTTGACAGAAACTTTGATCCTAAAATAGGAGACTTTGGGTTGGCTAAACTTTTCCCAGATAACGTTACTCATGTTAGCACTCGAGTGGCTGGAACTGTTGGATATTTGGCCCCCGAGTATGCACTTTTAGGACAGTTGACCAAGAAGGCAGATGTATACAGTTTTGGTGTGCTCATGCTGGAAATAGTTAGTGGAAGTAGCAGCAGTAAAACAGCATTTGGAGAAGAGTTGTCAATGCTCGTGGAATGGACTTGGAAACTAAGACAAGAAGGACGGCTTGTAGAACTAATCGATCCGGAACTGGTCGATTATCCGAAGGCTGAGGTGATGCGTTTCATCACAGTTGCACTCTTCTGTACCCAAGCAGCTGCAAATCAAAGGCCAACCATGAAGCAGGTTGTGGAAATGCTTTCAAGAGAGGTACACCTTAATGAAAAACTATTGACAGAGCCAGGAGTATACAAAGGACACAAAACTAGGAAGTTAAATGGTGCTGGTACAAGTTCTGAGGGGACTTCATTCTCCCATGGAGACAGAGGTAAAAAAGCTATGAAGTCTACTATATCTTCACCCCAATTTAATAGCTCAAACAGTCTGACTCAAATGCTTCCTAGGTGA 2796 46.6 MKSRSDEFQKFHSKQMCGTGTYRMTKASWIRFLHPMAIIFLPDLIPQTAIKFPLPALYYTFRLQSLTTTYYLSAMAATASSFIGTRLPIAPSGSGRVHARFSFGKPKSAPKKSSKKPTSDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLIFNCSDAVKEEFLRHLAPHRKLAVPFLTFYFTLDMHPFGVTVSDRYASVVPIRGASMSPTFNPRATSLAGPVTGDYVLVEKFCLQKYKFSPGDVIVYRSPCNYKENHVKRIIALPGDWVGTRQTYDVVKVPEGHCWVEGDNAECSMDSRSFGPEWILIFSVFTTMENLLDQSLRCGRSSFPARFSSRNRISSLRWVQPLVELSNFRVSYLRSRRRPPPVNLQNSLLSHGTDGRFAFARIAVTNNVRLFSYNSLRSATRNFHPSTRIGAGGYGVVYKGVLRDGTNVAVKSLSAESAQGTREFLTEINMISNIRHQHLVELIGCCVEGTHRILVYEYLENNSLASTLLGTMSKHVILDWPKRAKICLGTALGLAYLHEEAEYSVVHRDIKASNILLDRNFDPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEIVSGSSSSKTAFGEELSMLVEWTWKLRQEGRLVELIDPELVDYPKAEVMRFITVALFCTQAAANQRPTMKQVVEMLSREVHLNEKLLTEPGVYKGHKTRKLNGAGTSSEGTSFSHGDRGKKAMKSTISSPQFNSSNSLTQMLPR 931
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36548099 36568429 - ClCG10G022050.2 Cla10g02086 283745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g02086 931 SUPERFAMILY Chlorophyll a-b binding protein 117 333 - -
Cla10g02086 931 Pfam Chlorophyll A-B binding protein 130 318 IPR022796 -
Cla10g02086 931 CDD STKc_IRAK 599 865 - -
Cla10g02086 931 Gene3D Phosphorylase Kinase; domain 1 569 668 - -
Cla10g02086 931 PRINTS Bacterial leader peptidase 1 (S26A) family signature 440 452 IPR000223 GO:0006508|GO:0008236|GO:0016020
Cla10g02086 931 PRINTS Bacterial leader peptidase 1 (S26A) family signature 378 394 IPR000223 GO:0006508|GO:0008236|GO:0016020
Cla10g02086 931 PRINTS Bacterial leader peptidase 1 (S26A) family signature 463 482 IPR000223 GO:0006508|GO:0008236|GO:0016020
Cla10g02086 931 SMART serkin_6 593 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g02086 931 MobiDBLite consensus disorder prediction 911 931 - -
Cla10g02086 931 Pfam Signal peptidase, peptidase S26 380 455 IPR019533 GO:0004252|GO:0006465
Cla10g02086 931 SUPERFAMILY Protein kinase-like (PK-like) 575 863 IPR011009 -
Cla10g02086 931 Gene3D Umud Fragment, subunit A 378 510 - -
Cla10g02086 931 Gene3D Transferase(Phosphotransferase) domain 1 669 876 - -
Cla10g02086 931 SUPERFAMILY LexA/Signal peptidase 381 486 IPR036286 -
Cla10g02086 931 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 574 926 - -
Cla10g02086 931 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 574 926 - -
Cla10g02086 931 ProSiteProfiles Protein kinase domain profile. 593 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g02086 931 Gene3D Chlorophyll a/b binding protein domain 125 352 - -
Cla10g02086 931 CDD S26_SPase_I 381 486 IPR019533 GO:0004252|GO:0006465
Cla10g02086 931 ProSitePatterns Protein kinases ATP-binding region signature. 599 621 IPR017441 GO:0005524
Cla10g02086 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 715 727 IPR008271 GO:0004672|GO:0006468
Cla10g02086 931 MobiDBLite consensus disorder prediction 882 931 - -
Cla10g02086 931 MobiDBLite consensus disorder prediction 101 123 - -
Cla10g02086 931 Pfam Protein tyrosine and serine/threonine kinase 597 863 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00554 Cla-Chr3:6185640 Cla10g02086 Cla-Chr10:36548099 3.50E-140 dispersed
Cla04g00716 Cla-Chr4:22100950 Cla10g02086 Cla-Chr10:36548099 2.62E-154 dispersed
Cla07g01015 Cla-Chr7:26565312 Cla10g02086 Cla-Chr10:36548099 1.55E-107 dispersed
Cla09g00620 Cla-Chr9:5800438 Cla10g02086 Cla-Chr10:36548099 8.32E-79 dispersed
Cla10g02086 Cla-Chr10:36548099 Cla11g01693 Cla-Chr11:30524384 6.45E-95 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80895 PF07714 PK_Tyr_Ser-Thr 1.20E-45 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g02086 - - cmo:103486304 661.373