Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla10g02096 | ATGGAAGGCCATAATCCTCATCCTCATCCTCATCCCCATCCCCTTATTCAGCTCCACCAGCAGCAACAAATTCAACTTCCTCCCCCACCGCCGCATCTCCACCAGAGCCTCGCCGTCTCCGCCGATCAAACCACAGCAACAGCCGCCGACAGATTCCCTCAATGGAGTATTCAAGAAACAAAGGAGTTTTTGACGATCAGAGCCGAGCTGGATCAAACCTTCATGGAAACCAAACGAAACAAGCTCTTGTGGGAAATTACTGCCTCCAAAATGAAGGAAAAGGGTTTTAATCGCAGCGCTGAACAGTGTAAATGTAAATGGAAAAACCTCGTTACTCGTTACAAGGGTTGTGAAACAATGGAGCCAGAAATTTCAAGGCAGCAATTTCCATTCTACACAGAGTTACAAGCAATATTTGGGGCAAGAATGCAAAGAATATTATGGGCAGAGGCGGAGAGCGGCGGTAGCGGGTCGAAGAAGAAGACGTTACCATTATCGTCTGACGATGACGAAGAAAACGACGATAGCGATGGCGATGGAGGCGAGGCAAAAGTTAGCGGTAGGAAGAGGAAAAAAGTTAAAGGAATGGGCGGTACGACGACGGGAGGCGGCGAGGGCAGTGGAAAGAGTAGTATCAATGATTTGAAAGAAATGTTGGAAGATTTTATGAATCAACAAATGCAAATGGAGGTGCAATGGAGGGAGGCATTTGAGGCAAGGGAAAAAGAGAGACAAATGAGGGAAATGGAATGGAGAAGAAACATGGAAGCTTTAGAACATGAGAGGATAATGTTGGAAAGAAGATGGCGAGAAAGAGAAGAACAAAGGAGAATGAGAGAAGAAGTTAGGGCTGAGAAAAGAGATGCCTTAATCACAGCTTTGTTAAACAAGCTTAGAAGAGATGATCATATTTAA | 915 | 45.25 | MEGHNPHPHPHPHPLIQLHQQQQIQLPPPPPHLHQSLAVSADQTTATAADRFPQWSIQETKEFLTIRAELDQTFMETKRNKLLWEITASKMKEKGFNRSAEQCKCKWKNLVTRYKGCETMEPEISRQQFPFYTELQAIFGARMQRILWAEAESGGSGSKKKTLPLSSDDDEENDDSDGDGGEAKVSGRKRKKVKGMGGTTTGGGEGSGKSSINDLKEMLEDFMNQQMQMEVQWREAFEAREKERQMREMEWRRNMEALEHERIMLERRWREREEQRRMREEVRAEKRDALITALLNKLRRDDHI | 304 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 36676511 | 36677685 | + | ClCG10G022190.1 | Cla10g02096 | 283755 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla10g02096 | 304 | MobiDBLite | consensus disorder prediction | 152 | 212 | - | - | |
| Cla10g02096 | 304 | Gene3D | - | 55 | 116 | - | - | |
| Cla10g02096 | 304 | Coils | Coil | 212 | 232 | - | - | |
| Cla10g02096 | 304 | PANTHER | - | 1 | 301 | - | - | |
| Cla10g02096 | 304 | Pfam | Myb/SANT-like DNA-binding domain | 54 | 138 | IPR044822 | - | |
| Cla10g02096 | 304 | PANTHER | TRANSCRIPTION FACTOR MYB FAMILY-RELATED | 1 | 301 | - | - | |
| Cla10g02096 | 304 | ProSiteProfiles | Myb-like domain profile. | 55 | 111 | IPR001005 | - | |
| Cla10g02096 | 304 | CDD | GT1 | 53 | 118 | - | - | |
| Cla10g02096 | 304 | Coils | Coil | 248 | 275 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cla04g00701 | Cla10g02096 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla06g01733 | Cla-Chr6:30884184 | Cla10g02096 | Cla-Chr10:36676511 | 2.52E-07 | dispersed | |
| Cla08g01699 | Cla-Chr8:29590562 | Cla10g02096 | Cla-Chr10:36676511 | 8.32E-11 | dispersed | |
| Cla10g02096 | Cla-Chr10:36676511 | Cla01g00116 | Cla-Chr1:1043610 | 4.60E-08 | dispersed | |
| Cla05g02199 | Cla-Chr5:33693837 | Cla10g02096 | Cla-Chr10:36676511 | 2.09E-08 | transposed | |
| Cla07g01074 | Cla-Chr7:27342323 | Cla10g02096 | Cla-Chr10:36676511 | 1.45E-30 | transposed | |
| Cla10g01831 | Cla-Chr10:34285311 | Cla10g02096 | Cla-Chr10:36676511 | 1.04E-07 | transposed | |
| Cla10g02096 | Cla-Chr10:36676511 | Cla04g00701 | Cla-Chr4:21894415 | 9.04E-61 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 61970 | PF13837 | Myb_DNA-bind_4 | 2.20E-18 | CL0123 | Cla | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla10g02096 | - | - | csv:101211490 | 424.861 |