Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g02111 ATGGACATGGATACCGACGAAAATTCAAATGCCAAAGGAAAGGAAGGGCAAGGGAAGCTCATAATGGTAATATTAGTGGGCGCACCTGGAAGCGGCAAATCCACCTTCTGCGAGCTTGTAATGGGTTCCTCTTCTCGCCCTTGGGTTCGAATCTGTCAGGATACCATTGGAAATGGAAAGTCTGGAACCAAAGCCCAGTGCTTAAAGAGTGCAGCCAGTGCACTGAATAATGGAAAGAGTGTATTTGTGGACAGGTGCAATCTTGAAATAGAGCAGCGCGCTGATTTTGTGAAGCTCGGTGGCCCTCAAGTAGATGTACATGCCGTTGTATTAGATCTTCCTGCACAGCTCTGTATCTCTCGTTCTGTGAAGCGGACTGGTCATGAAGGGAACTTATCAGGTGGAAAAGCTGCTGCTGTTGTGAATAAAATGCTGCAAAAGAAAGAATTGCCCAAACTAAATGAAGGGTTCACTCGCATAACCTTTTGCCACAATGAGACCGATGTTCAATCCGCTATAGATATGTACAAATCGCTTGATTTACATAATTTGCTTCCACATGGATGTTTTGGACAGAAGAATCCAAACAAGAAAGTACAACTTGGCATAATGAAGTTCTTGAAGAAAGCAGAAAAACCTTCTGAGACGCGTTCTAGTGCCAATACTGTTAAGGATTCTCCAACTCCACAAACTACCCAGGAAAATAGCGACTCTTGTGATAAAAAGGAAGAGTCTGCCTGCACAATGTCAAAAGATGTAGATATAGAGGCAGAGAAAGGTGAATGTCCAGGCATTAGATCCTTAGAAGACGATATTTCTCAAAGCAATTCTCCAACTCTTGCATTTCCATCTATTTCAACTTCAGATTTCAAGTTTAGCCATGAAAAAGCTGCTGAAATTATTGTTGAGAAGGTTGAGGAATTCATGGATAAGCTTGGAAATGCCAAACTTGTACTGGTAGACTTGAGTCGTGGATCAAAGATCTTGTCTTTGGTTAAAGCTAAAGCAGCTAAGAAAAATATTAGTTCCACCAAGTTTCTTACATTTGTAGGTGATATAACTAAACTCAATTCAGAAGGTGGATTGCGCTGCAATGTTATAGCCAATGCTGCAAACTGGCGACTGAAACCAGGAGGGGGTGGTGTCAATGCTGCAATTTTTAGTGCTGCAGGTCCTGGTCTGGAAGTGGCAACTAAACAACAAGCAAACTCCCTTCAACCTGGCAATGCCGTGGCCGTTCCGTTGCCTTCAACTTCTCCTTTGTTCAATAGGGAAGGAGTAACCCATGTTATACATGTTCTTGGACCCAACATGAATCCACAGAGGCCAAATTATCTCAGCAATGACTATGATGAAGGCTGCAAACTTCTTCGCAATGCTTACTCTTCCTTATTTCAAGCCTTTATTTCAATTGTAGAAGACAAATTTAAGTCGGTTAAGGAAATTCACGAACGCCTCGGCTCAGTACCTTCAGAACCACAAAAGCACTCTGAGGACAGCCATCACAAGTTTAAGAGAGAGAATTTGCAAAATCCTGAAAGAAGCAAAAAATGGAAAGGATCTCAAGACCCAACTGAAGCATTAAACCAAAACAACAATAAGACTGTCCCCAAAATGAGTAAGCACTGGGGTTCATGGGCACAAGCACTTTACAACACTGCAATGCATCCCGAGCAACATAGCGATACTGTACTGGAGACATCAGATGATGTTGTAATACTGAATGATATTTATCCAAAGGCACGCAAGCATCTTCTAGTAGTGGCTCGCCATGAAGGCCTCGATCAACTAACTGATGTATGTAGAGAACACCTTCCATTGTTGAGGACAATGCACGCTGTGGGTTTGAAGTGGATCGATAAGTTCTTTCATGAAGATGCATCATTAGTTTTTCGCCTTGGATACCACTCGGCTCCATCAATGAGGCAACTGCACCTACATGTTATAAGCCAGGATTTCGACTCCAGTCATCTGAAAAACAAGAAGCATTGGAATTCTTTCAACACTGATTTCTTCAGAGACTCGGTTGCCATTATGGACGAAGTCAGTAGCCATGGAAAGGCGAGCATCATGGACGATGAGAGCTTGATGTCTATGGAGTTACGTTGCAACAGATGCAGAAGTGCTCATCCCAACTTGCCCAAATTGAAAGCGCATAGTTTCAAATGCCAAGCGCCTTTCCCTTCCACACTACTTGAGGGCGGTCGTTTAGTGATTGCGCCAAGTAATGCTCCTCTTTCTTAG 2244 42.96 MDMDTDENSNAKGKEGQGKLIMVILVGAPGSGKSTFCELVMGSSSRPWVRICQDTIGNGKSGTKAQCLKSAASALNNGKSVFVDRCNLEIEQRADFVKLGGPQVDVHAVVLDLPAQLCISRSVKRTGHEGNLSGGKAAAVVNKMLQKKELPKLNEGFTRITFCHNETDVQSAIDMYKSLDLHNLLPHGCFGQKNPNKKVQLGIMKFLKKAEKPSETRSSANTVKDSPTPQTTQENSDSCDKKEESACTMSKDVDIEAEKGECPGIRSLEDDISQSNSPTLAFPSISTSDFKFSHEKAAEIIVEKVEEFMDKLGNAKLVLVDLSRGSKILSLVKAKAAKKNISSTKFLTFVGDITKLNSEGGLRCNVIANAANWRLKPGGGGVNAAIFSAAGPGLEVATKQQANSLQPGNAVAVPLPSTSPLFNREGVTHVIHVLGPNMNPQRPNYLSNDYDEGCKLLRNAYSSLFQAFISIVEDKFKSVKEIHERLGSVPSEPQKHSEDSHHKFKRENLQNPERSKKWKGSQDPTEALNQNNNKTVPKMSKHWGSWAQALYNTAMHPEQHSDTVLETSDDVVILNDIYPKARKHLLVVARHEGLDQLTDVCREHLPLLRTMHAVGLKWIDKFFHEDASLVFRLGYHSAPSMRQLHLHVISQDFDSSHLKNKKHWNSFNTDFFRDSVAIMDEVSSHGKASIMDDESLMSMELRCNRCRSAHPNLPKLKAHSFKCQAPFPSTLLEGGRLVIAPSNAPLS 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36799708 36803380 - ClCG10G022350.1 Cla10g02111 283770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g02111 747 PANTHER APRATAXIN-RELATED 20 743 - -
Cla10g02111 747 SMART YBR022w_8 345 501 IPR002589 -
Cla10g02111 747 ProSiteProfiles Macro domain profile. 333 586 IPR002589 -
Cla10g02111 747 MobiDBLite consensus disorder prediction 487 521 - -
Cla10g02111 747 PANTHER APRATAXIN 20 743 IPR026963 GO:0003677|GO:0006281|GO:0033699
Cla10g02111 747 SUPERFAMILY HIT-like 533 707 IPR036265 -
Cla10g02111 747 MobiDBLite consensus disorder prediction 522 536 - -
Cla10g02111 747 MobiDBLite consensus disorder prediction 487 536 - -
Cla10g02111 747 ProSitePatterns HIT domain signature. 632 650 IPR019808 -
Cla10g02111 747 ProSiteProfiles HIT domain profile. 550 658 IPR011146 GO:0003824
Cla10g02111 747 SUPERFAMILY Macro domain-like 328 478 IPR043472 -
Cla10g02111 747 SUPERFAMILY Macro domain-like 276 315 IPR043472 -
Cla10g02111 747 MobiDBLite consensus disorder prediction 210 243 - -
Cla10g02111 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 166 IPR027417 -
Cla10g02111 747 Gene3D Leucine Aminopeptidase, subunit E, domain 1 228 325 IPR043472 -
Cla10g02111 747 Gene3D - 3 179 IPR027417 -
Cla10g02111 747 MobiDBLite consensus disorder prediction 216 235 - -
Cla10g02111 747 Pfam AAA domain 22 144 - -
Cla10g02111 747 Pfam Macro domain 368 479 IPR002589 -
Cla10g02111 747 Gene3D Leucine Aminopeptidase, subunit E, domain 1 326 480 IPR043472 -
Cla10g02111 747 Pfam Scavenger mRNA decapping enzyme C-term binding 551 663 - -
Cla10g02111 747 Gene3D - 545 725 IPR036265 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g02111 K10863 - csv:101216867 1351.27