Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g02119 ATGGGCGGTCACGATCAGAAACAGAAAGAGACTACTGTCCACAAAAAAGGATCGTCCGAGAAGCATTCTTCCTTCCAAAATCCCCTTTCTCACCTGCGATTTTCGTTGCATCAAGATCCACCGACAATGTCTTCCTCTTCTCCGGCCATACTTCCCATCTCCAATCCTCAATCCACCGCCGTCCCCGCCGCCGCATCTGGTGGTTCTGTCCAATCTCAAGGCCCTGTCACCACGCCGGCCTTCCGCGCCTTCATTAACCACCTATCGGAATATCTCCGGCACGGCCTTTCCCAGCGAAGACCATGGGCCGAACTTGCAGATCGGACGGCATTTTCAAAGCCTGAATCATTTTCCGAAGCGACCCTTCGCATTCGCAAGAATTACTCCTATTTTCGCGTCAATTATCTCGCTGTGGTTGCTCTGATCCTCGGCTTTTCGCTCGTTTCTCATCCGTTTTCTCTTATCCTTCTGGCCGGTCTTTTATCCTCGTGGCTATTCCTCTACCTCTTCCGTCCGTCGGATCAGCCGCTTGTTTTATTCGGCCGCACATTCAAGGATAGCGAAACCCTAATTCTCCTGGTTGTGCTCAGCGTGTTCGTCGTATTCCTCACCAGCGTTGGATCGGTCCTCGTTTCGGCTCTTATGGTCGGTGTGGCTCTGGTTTGTGCCCACGGCGCGTTTAGGGTTCCTGAAGATCTCTTCCTAGACGAACAAGAAAATGTATCCACCGATCCACCGACAATGTCTTCCTCTTCTCCGGCCATACTTCCCATCTCCAATCCTCAATCCACCGCCGTCCCCGCCGCCGCATCTGGTGGTTCTGTCCAATCTCAAGGCCCTGTCACCACGCCGGCCTTCCGCGCCTTCATTAACCACCTATCGGAATATCTCCGGCACGGCCTTTCCCAGCGAAGACCATGGGCCGAACTTGCAGATCGGACGGCATTTTCAAAGCCTGAATCATTTTCCGAAGCGACCCTTCGCATTCGCAAGAATTACTCCTATTTTCGCGTCAATTATCTCGCTGTGGTTGCTCTGATCCTCGGCTTTTCGCTCGTTTCTCATCCGTTTTCTCTTATCCTTCTGGCCGGTCTTTTATCCTCGTGGCTATTCCTCTACCTCTTCCGTCCGTCGGATCAGCCGCTTGTTTTATTCGGCCGCACATTCAAGGATAGCGAAACCCTAATTCTCCTGGTTGTGCTCAGCGTGTTCGTCGTATTCCTCACCAGCGTTGGATCGGTCCTCGTTTCGGCTCTTATGGTCGGTGTGGCTCTGGTTTGTGCCCACGGCGCGTTTAGGGTTCCTGAAGATCTCTTCCTAGACGAACAAGAAAATGTATCCACCGGTTTCCTCTCGTTCTTCAGCAGCGCGGCTTCCACCGCCGCCGCCGCGCCCGTGGCTGCTCGCACTTTCTTTTGGTTCATGGGAAAAAGCCACAACCCTCTGAGTGAATTTCAGGTGCACCCACTTCAGTTCATGCAGATTCTTGCACCGAAAACAGCTGATTGGTGCTCCAAATCACCAAATACGAACAGAAAATTCAAGAATCAACAATGGAAAAGCTGTTCTTCATACCTCATTGCTCTCTTTTTTGCTCATCTTTTGGCTGTTTCCCTTCGACCAGTCACTGGCCAGATGTGGGATGGAGTGGCTGTTACACAAGGAGATTTTCAAGCTCTTCAAGCTATAAAGCACGAACTCATCGATCTAAAAGGAGCTTTGCATGGCTGGAATGGCAGCAATGGAGCTTGTTCCGGACAGTGGGCAGGAATCAAGTGTGTGAAGGGCCAGGTTATCGCTATACAGCTTCCATGGAAGGCTCTTGCTGGCCGGATTTCCGACAGGATTGGACAGCTCCGGGAACTTCGGAAACTCAGCCTCCATGACAACATGATCTCCGGTGCGGTCCCTCGGTCCCTGGGGTTCCTTCCAAATCTCAGAGGAGTTTATCTTTTCAACAACAGATTATCAGGTTCTATTCCTCCTACAATTGGTAACCTTCCCCTTCTTCAAACTCTTGATTTGAGCAACAATTTACTCACTGGAGAAATTCCTTCTGGTCTAGCAAATTCTACCAAATTGCTTAGAGTTAATCTGAGTTACAATTCACTGTCGGGATCTATCCCAAGTAGTTTTACACAGTCGTTTTCTCTTATAATTCTTGCTCTTCAGCACAATAATATTTCTGGGACCGTCCCAGACTCTTGGGGAGGTCTTGGAAATAGAACTTGCCCACTTGGGGTTTTAACACTTGATCATAATGCTATATATGGAGCCATTCCAGCTTCTTTGAGTAAGTTGGAATGGCTTCAAGAGATTTCCATCGGGGACAATAAGATCTCTGGGGCTATACCAAGTGAGATAGGCAGGCTGAAGAGACTTCGTCTTCTGGATTTGTCAAACAACGCCATTAGTGGCGGCTTCCCTTCAAGTTTCTCCAATCTCTCCTCTCTTGAGTCATTGAATGTTGAAAATAATCGCCTTGAAAGCCAGATTCCAGGAGATATTGATAGATTGCAGAATCTCTCAGTGGTCAAGCTTGGGAAGAATCGTTTTAGTGGTGAAATTCCTGCAAGTTTTGGGAACATTTCTGGTATTGACCAACTTGATTTCTCAGAAAATAACTTCACGGGACAGATTCCAACATCATTGACCCGTTTGTTGAATCTAACCTCTTTCAATGTCTCCTACAACAATCTCTCTGGCCCTGTTCCAGTTCTCCTATCGAATAAGTTCAACGTGAGCTCTTTCTTAGGGAACCTTCAACTGTGTGGTTTTAGTACTTCAACTCCATGCCTACCTGCATCCTCCCCACATAATATTACAACTCCATCAACTGAGGTACTGAAACCGCATCGCCACCGCAGACTTAGTCTGAAGGACATAATTCTGATAGCTGCTGGAGCTCTGTTGGTGCTTCTTCTTCTTCTCTGCTCAATTTTGCTCTGTTGTTTGTTATCAAAAAGAGCTGCTGCCAGAAAGAATGACAAAACAGCTGCCAAGGAAACTGCTGCGAGAAGCATCGAGAAGGCAGCACCAGGCAGCACCGATGTTGGGGCAGGTGAAGCTGGTGGAAAACTAGTTCATTTTGATGGGCCATTTGTTTTCACTGCAGATGACCTTTTGTGTGCGACTGCGGAGATCATGGGCAAAAGCACATATGGAACAGCATATAAAGCAACATTAGAAGATGGAAATGAAGTTGCGGTGAAAAGATTGAGGGAAAAGACAACAAAAGGGCAGAAAGAATTTGAAGCCGAAGTTGCAGCACTCGGAAAGATTAGACATCCGAATCTACTTGCTCTTAGAGCTTACTACTTAGGCCCCAAAGGAGAGAAGCTCCTTGTCTTTGATTACATGCCCAGAGGAAGTCTCTCTTCCTTCCTTCATGCTCGCGGACCGGAAACCACAGGCTACAATGCACCAGAGCTAACAAAAACCAAAAAAACCACATCAAAGACAGATGTTTACAGCCTTGGAGTCATAATCTTGGAACTTTTGACAGGAAAGTCTCCTGGAGAACCCATGGATGGAATGGATTTACCTCAGTGGGTGGCCTCAATTGTAAAGGAAGAGTGGACAAATGAAGTGTTTGATTTGGAGCTTATGAAAGATACCCAAAATATTGGTGATGAACTGTTGAACACTTTAAAACTAGCCCTGCATTGTGTTGATCCATCACCAGCTGCTCGGCCAGATGTTCAGCAAATTCTCCAGCAACTGGAGGAAATTAATGCTTCTACTTCCGGTGACGATGGTTTCAAAAACCAACCAGCAAATGAATAG 3786 47.62 MGGHDQKQKETTVHKKGSSEKHSSFQNPLSHLRFSLHQDPPTMSSSSPAILPISNPQSTAVPAAASGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLSSWLFLYLFRPSDQPLVLFGRTFKDSETLILLVVLSVFVVFLTSVGSVLVSALMVGVALVCAHGAFRVPEDLFLDEQENVSTDPPTMSSSSPAILPISNPQSTAVPAAASGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLSSWLFLYLFRPSDQPLVLFGRTFKDSETLILLVVLSVFVVFLTSVGSVLVSALMVGVALVCAHGAFRVPEDLFLDEQENVSTGFLSFFSSAASTAAAAPVAARTFFWFMGKSHNPLSEFQVHPLQFMQILAPKTADWCSKSPNTNRKFKNQQWKSCSSYLIALFFAHLLAVSLRPVTGQMWDGVAVTQGDFQALQAIKHELIDLKGALHGWNGSNGACSGQWAGIKCVKGQVIAIQLPWKALAGRISDRIGQLRELRKLSLHDNMISGAVPRSLGFLPNLRGVYLFNNRLSGSIPPTIGNLPLLQTLDLSNNLLTGEIPSGLANSTKLLRVNLSYNSLSGSIPSSFTQSFSLIILALQHNNISGTVPDSWGGLGNRTCPLGVLTLDHNAIYGAIPASLSKLEWLQEISIGDNKISGAIPSEIGRLKRLRLLDLSNNAISGGFPSSFSNLSSLESLNVENNRLESQIPGDIDRLQNLSVVKLGKNRFSGEIPASFGNISGIDQLDFSENNFTGQIPTSLTRLLNLTSFNVSYNNLSGPVPVLLSNKFNVSSFLGNLQLCGFSTSTPCLPASSPHNITTPSTEVLKPHRHRRLSLKDIILIAAGALLVLLLLLCSILLCCLLSKRAAARKNDKTAAKETAARSIEKAAPGSTDVGAGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSTYGTAYKATLEDGNEVAVKRLREKTTKGQKEFEAEVAALGKIRHPNLLALRAYYLGPKGEKLLVFDYMPRGSLSSFLHARGPETTGYNAPELTKTKKTTSKTDVYSLGVIILELLTGKSPGEPMDGMDLPQWVASIVKEEWTNEVFDLELMKDTQNIGDELLNTLKLALHCVDPSPAARPDVQQILQQLEEINASTSGDDGFKNQPANE 1261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36865747 36874247 - ClCG10G022440.1 Cla10g02119 283778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g02119 1261 Gene3D Ribonuclease Inhibitor 553 746 IPR032675 -
Cla10g02119 1261 SUPERFAMILY Protein kinase-like (PK-like) 1047 1245 IPR011009 -
Cla10g02119 1261 MobiDBLite consensus disorder prediction 1 21 - -
Cla10g02119 1261 MobiDBLite consensus disorder prediction 1 27 - -
Cla10g02119 1261 Pfam Leucine rich repeat 770 828 IPR001611 GO:0005515
Cla10g02119 1261 Pfam Protein kinase domain 1136 1240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g02119 1261 Gene3D Phosphorylase Kinase; domain 1 1049 1120 - -
Cla10g02119 1261 Pfam PRA1 family protein 96 238 IPR004895 -
Cla10g02119 1261 Pfam PRA1 family protein 301 443 IPR004895 -
Cla10g02119 1261 SUPERFAMILY L domain-like 589 935 - -
Cla10g02119 1261 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 511 1136 - -
Cla10g02119 1261 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1137 1248 - -
Cla10g02119 1261 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 511 1136 - -
Cla10g02119 1261 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1137 1248 - -
Cla10g02119 1261 SMART LRR_typ_2 619 642 IPR003591 -
Cla10g02119 1261 SMART LRR_typ_2 667 691 IPR003591 -
Cla10g02119 1261 SMART LRR_typ_2 791 814 IPR003591 -
Cla10g02119 1261 SMART LRR_typ_2 815 839 IPR003591 -
Cla10g02119 1261 SMART LRR_typ_2 643 666 IPR003591 -
Cla10g02119 1261 SMART LRR_typ_2 887 910 IPR003591 -
Cla10g02119 1261 Gene3D Ribonuclease Inhibitor 747 936 IPR032675 -
Cla10g02119 1261 Pfam Leucine rich repeat N-terminal domain 555 593 IPR013210 -
Cla10g02119 1261 Gene3D Transferase(Phosphotransferase) domain 1 1121 1257 - -
Cla10g02119 1261 Pfam Protein tyrosine and serine/threonine kinase 1047 1132 IPR001245 GO:0004672|GO:0006468
Cla10g02119 1261 ProSiteProfiles Protein kinase domain profile. 1043 1261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla04g00678 Cla10g02119 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01297 Cla-Chr7:30103830 Cla10g02119 Cla-Chr10:36865747 8.45E-30 dispersed
Cla10g02119 Cla-Chr10:36865747 Cla05g01211 Cla-Chr5:13547561 2.05E-10 dispersed
Cla07g00442 Cla-Chr7:5996743 Cla10g02119 Cla-Chr10:36865747 1.65E-49 transposed
Cla07g00443 Cla-Chr7:6006196 Cla10g02119 Cla-Chr10:36865747 2.38E-70 transposed
Cla10g02119 Cla-Chr10:36865747 Cla04g00677 Cla-Chr4:21524386 1.14E-74 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80898 PF03208 PRA1 3.20E-47 No_clan Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g02119 - - bhj:120090401 1162.9