Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla10g02125 | ATGAATAACATAAATCAAACGATAAATACACTCGCTGGCGGATCTTCTGACAACAGAACCAATAATTTCGGTATGGAAGTTCCGAAATTCAAGTCTCTTCAACCTCCTCCATTTCCCATGTCTCCTTCTTCTTACCTTTCAGCTTTCTCTTCTGGTTTAAGCCCCACTGAGCTTCTAAATTCCCCTCTCCTTTTCTCATTTGGTGTTTTTCCTTCTCCTACTTCTGGTGCCTTAAATTTGAGAAATGATTATGAGGAGGGTGAGCAGCAAGAAATGAAGGCAGATGTGAAAAATTACTCTGCTTCTTCGTTTAACCCACAAACAGGATCCTCTGTTTCGTCTTATTTTCAGTCCTCTTCTTCCAACGTGACACCACTGAATCCGAACGGTTTGTCGTGTGATGAAAGTGGAGCGAAATCAGAATTTGTTACTACAGAAATGGCGGCAGCTGAATCAAAGCCAATTTCTCAGCTACCAATTTACAACAGAGAACAGAAAAAATCAGAGAACGATGGATATAACTGGAGAAAATACGGGCAAAAACAAGTGAAAGGAAGCGAAAATCCACGAAGCTATTACAAGTGCACTTTCCCAAGTTGCCCAACAAAGAAGAAAGTTGAAAGATCTTTAGACGGCCAAATTACTGAGATTGTTTATAAGGGAAGCCATAATCACGCCAAGCCCCAGCCCACAAGACGTTCCGGTAACTCCGCGATTTACGATCCATCTTCGGCGGATTCCGCCCTGCTGCAGGAGGATTCCTCCGTCTCGGTGGGGGATGAGGAATTCGAACCCAATTCGCCGTTTAGCAACTCGGTGGACGACAATGAAAATGAACCGGAAGCTAAGAGATGGAAAGGGGAAAATGAGAACGAGGGATATTGTGAGGGTGGAAGCAGAACAGTGAAAGAGCCAAGAATTGTGGTTCAAACAACCAGCGAAATTGACATACTGCCGGATGGTTATAGATGGAGGAAATACGGACAAAAGGTTGTCAAAGGAAATCCAAATCCGAGGAGCTACTACAAATGCACATCTTTAGGCTGCCCGGTGAGGAAACACATCGAGAGAGCGGCTAACGACATGAGGGCCGTGATCACTACCTACGAAGGCAAACACAACCATGAAGTTCCAGCAGCCCGTGGCAGCGGTGGCAGTGGCTATAATGCCATCAACCGACCTACACCGACCAACATTCCAATGCCGGTGAGGCCGTCTGCCATCGGTAGTCATTCTTTCCCGGCAAATTTTCCGGCCACGTTCCAGCCGGCAAATTTAGCCATGTCAGAAATTGGAGCAGAAGCATCATCATTCCCATTTCAAACATCACAAGGAGTGCCTCCAAGTTTCCAAGTTTCAGGATTTGGATCCGCAGCCAAGGAAGAAGCCAGAGATGACATATACTTCATCAACTCATTTCTATCTTAG | 1428 | 45.45 | MNNINQTINTLAGGSSDNRTNNFGMEVPKFKSLQPPPFPMSPSSYLSAFSSGLSPTELLNSPLLFSFGVFPSPTSGALNLRNDYEEGEQQEMKADVKNYSASSFNPQTGSSVSSYFQSSSSNVTPLNPNGLSCDESGAKSEFVTTEMAAAESKPISQLPIYNREQKKSENDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLDGQITEIVYKGSHNHAKPQPTRRSGNSAIYDPSSADSALLQEDSSVSVGDEEFEPNSPFSNSVDDNENEPEAKRWKGENENEGYCEGGSRTVKEPRIVVQTTSEIDILPDGYRWRKYGQKVVKGNPNPRSYYKCTSLGCPVRKHIERAANDMRAVITTYEGKHNHEVPAARGSGGSGYNAINRPTPTNIPMPVRPSAIGSHSFPANFPATFQPANLAMSEIGAEASSFPFQTSQGVPPSFQVSGFGSAAKEEARDDIYFINSFLS | 475 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 36911290 | 36913963 | + | ClCG10G022500.1 | Cla10g02125 | 283784 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla10g02125 | 475 | MobiDBLite | consensus disorder prediction | 219 | 298 | - | - | |
Cla10g02125 | 475 | PANTHER | WRKY TRANSCRIPTION FACTOR WRKY24-LIKE | 17 | 458 | - | - | |
Cla10g02125 | 475 | ProSiteProfiles | WRKY domain profile. | 313 | 378 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g02125 | 475 | Gene3D | WRKY domain | 156 | 229 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g02125 | 475 | ProSiteProfiles | WRKY domain profile. | 164 | 228 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g02125 | 475 | MobiDBLite | consensus disorder prediction | 276 | 298 | - | - | |
Cla10g02125 | 475 | MobiDBLite | consensus disorder prediction | 228 | 275 | - | - | |
Cla10g02125 | 475 | SMART | WRKY_cls | 169 | 227 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g02125 | 475 | SMART | WRKY_cls | 318 | 377 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g02125 | 475 | Pfam | WRKY DNA -binding domain | 320 | 376 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g02125 | 475 | Pfam | WRKY DNA -binding domain | 170 | 225 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g02125 | 475 | SUPERFAMILY | WRKY DNA-binding domain | 310 | 378 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g02125 | 475 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Cla10g02125 | 475 | Gene3D | WRKY domain | 305 | 371 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla10g02125 | 475 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 17 | 458 | IPR044810 | GO:0003700 | |
Cla10g02125 | 475 | SUPERFAMILY | WRKY DNA-binding domain | 166 | 228 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g00015 | Cla-Chr3:176047 | Cla10g02125 | Cla-Chr10:36911290 | 6.03E-115 | dispersed | |
Cla10g02125 | Cla-Chr10:36911290 | Cla03g01024 | Cla-Chr3:19476497 | 1.01E-13 | dispersed | |
Cla10g02125 | Cla-Chr10:36911290 | Cla11g00430 | Cla-Chr11:4957420 | 3.69E-79 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61971 | PF03106 | WRKY | 9.50E-25 | CL0274 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla10g02125 | K13424 | - | csv:101205651 | 801.971 |