Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g02141 ATGAGTTGTAACGAGAAGAATAGAGGGGTAGATGATAGGGAAACTGAGCAGCCAGTTTTTAGGAACTCTGTCGAGGCACAACGGATACCAGCCATCCAGAATGGATCCATAACGGCCCAACAGTTGACGATTGATGATAATCTTCTTGTTGACCCAAAATTGCTATTTATTGGATCGAAGATTGGTGAGGGTGCTCACGGGAAGGTTTATGAAGGCAGGTACCGGAACCAAATTGTGGCCATTAAAGTTCTCCATCGAGGGAGTACTCCAGAAGAAAGAGCAGCTCTTGAAAATCGTTTTGCCCGTGAAGTAAATATGATGTCCCGAGTAAAACATGAAAATCTTGTCAAGTTCATTGGAGCTTGTAAAGAACCTCTAATGGTGATAGTTACAGAGCTATTACCAGGAATGTCACTCAGGAAGTATCTGATGAATAATCGTAAGCAACAGCTGGACCCTCGGATGGCCATTAACTTTGCTTTGGATGTTGCTCGTGCTATGGATTGTCTGCATGCAAATGGGATTATACATAGAGATCTGAAACCTGATAATCTGTTGCTTACTGCAAATCAAAGATCTGTGAAGCTTGCAGACTTTGGACTTGCTAGAGAAGAATCTGTGACTGAGATGATGACTGCTGAAACAGGGACTTACCGCTGGATGGCTCCTGAGGTCAAATTATTGGCATTGCAGAGATTTGTTACTGGTAAGCATTTTAAAAGTTTTGCTTTCTGGGAGATGAAATTTGATTGGCCATCGTGTCTGTCTTTGCAGTTGTATAGCACTGTGACATTGCGCCAGGGAGAGAAAAAGCATTACAACAACAAAGTCGATGTATACAGCTTTGGAATTGTCTTATGGGAGCTCTTGACCAACCGAATGCCATTTGAAGGGATGTCCAATTTGCAAGCTGCTTATGCTGCTGCTTTCAAGGTGCCAAAAGTTGCATTTCTTTCCATTTTGTTTAGTTTGATTATTATGACATATAATGCAACATTATGGGGCACAGCGTCCCAATTACTTCTGCAAATAAAAGAAAACGAACATGTGCTTTTTGACCTCATCATTTCAGAAACATTTTCTTCAGTCATATTATGTGTTACTCTTCCAAAGTATCTAATTGTTTGGTGCTGTGGTCTGATAATGCAGCAAGAGAGACCTAGTATTCCAGGTGACATACCTCCCGATTTAGCATTTATAGTACAGTCGTGTTGGGTCGAAGATCCTAACATGAGGCCCAGCTTCAGCCAGATCATCCGCATGCTTAATGCTTATCTGTTTACACTCCCAACTCCTTCACCATCTTCACCATCTTCACCAAAATCTGACACAACAGAGACAGCAACAACTAGCAATGGTGCTATTACCGAGTTCTCTGCTCGTGCAAGAGGAAAGTTTGGATTCCTTCGCCAACTGTTTGCTGCTAAGAGGGCTAAGAACTCGCAATGA 1449 42.17 MSCNEKNRGVDDRETEQPVFRNSVEAQRIPAIQNGSITAQQLTIDDNLLVDPKLLFIGSKIGEGAHGKVYEGRYRNQIVAIKVLHRGSTPEERAALENRFAREVNMMSRVKHENLVKFIGACKEPLMVIVTELLPGMSLRKYLMNNRKQQLDPRMAINFALDVARAMDCLHANGIIHRDLKPDNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVKLLALQRFVTGKHFKSFAFWEMKFDWPSCLSLQLYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKVPKVAFLSILFSLIIMTYNATLWGTASQLLLQIKENEHVLFDLIISETFSSVILCVTLPKYLIVWCCGLIMQQERPSIPGDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNAYLFTLPTPSPSSPSSPKSDTTETATTSNGAITEFSARARGKFGFLRQLFAAKRAKNSQ 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 37063622 37067589 + ClCG10G022660.2 Cla10g02141 283800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g02141 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Cla10g02141 482 PANTHER SERINE-THREONINE PROTEIN KINASE 382 460 - -
Cla10g02141 482 ProSiteProfiles Protein kinase domain profile. 55 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g02141 482 PANTHER SERINE-THREONINE PROTEIN KINASE 15 240 - -
Cla10g02141 482 PANTHER SERINE-THREONINE PROTEIN KINASE 258 312 - -
Cla10g02141 482 Gene3D Phosphorylase Kinase; domain 1 43 134 - -
Cla10g02141 482 MobiDBLite consensus disorder prediction 432 455 - -
Cla10g02141 482 CDD STKc_MAP3K-like 61 422 - -
Cla10g02141 482 Pfam Protein kinase domain 59 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g02141 482 MobiDBLite consensus disorder prediction 1 21 - -
Cla10g02141 482 SMART serkin_6 55 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g02141 482 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 382 460 - -
Cla10g02141 482 Gene3D Transferase(Phosphotransferase) domain 1 135 319 - -
Cla10g02141 482 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 15 240 - -
Cla10g02141 482 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 258 312 - -
Cla10g02141 482 MobiDBLite consensus disorder prediction 1 19 - -
Cla10g02141 482 Pfam Protein tyrosine and serine/threonine kinase 270 304 IPR001245 GO:0004672|GO:0006468
Cla10g02141 482 Gene3D Transferase(Phosphotransferase) domain 1 355 426 - -
Cla10g02141 482 SUPERFAMILY Protein kinase-like (PK-like) 56 445 IPR011009 -
Cla10g02141 482 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01593 Cla-Chr3:31707522 Cla10g02141 Cla-Chr10:37063622 2.59E-07 dispersed
Cla09g01885 Cla-Chr9:36549776 Cla10g02141 Cla-Chr10:37063622 8.34E-08 dispersed
Cla10g01313 Cla-Chr10:28072770 Cla10g02141 Cla-Chr10:37063622 3.18E-08 dispersed
Cla10g02141 Cla-Chr10:37063622 Cla11g01089 Cla-Chr11:22239628 2.37E-61 dispersed
Cla10g02141 Cla-Chr10:37063622 Cla06g01701 Cla-Chr6:30598998 3.68E-127 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80899 PF00069 Pkinase 1.50E-40 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g02141 - - cmax:111481423 506.908