Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla10g02150 ATGATGGCCGGAAAACCATATATTTTTCTCTCCTTTTGTTTTATTCTTTCTGTCTCCACTTTGGGTAGATTTGTTGTCGAGAAGAACAGCTTGAAGATAACTTCCCCAGATTCCATCAAGGGTGTTTACGAATGTGCGATTGGGAATTTTGGGGTTCCTGAATATGGAGGCACAATGACTGGCATCGTGCATTATCCTAAAGCCAATCAGAAGGCATGCAAGAGCTTTGAGGATGCCGGTATCTCTTTCAAGTCCAAACCTGGAAGTCTCCCTACCTTTGTTCTTGCCGATCGAGGGGATTGTTACTTCACCACGAAGGCGTGGAATGCACAAAATGGTGGAGCTGCAGCAATTCTTGTTGCAGATGATAGACTTGAACCGTTGATTACCATGGACTCTCCAGAACAAGAGAAGGCAGATGACAATTACCTAAAAGACATTACCATACCTTCTGCTCTTATTAGCAAAAGCTTGGGGGATGCCATCAAGAAAGCTCTATCTAGTGGAGAGATGGTTAATATAAATCTTGATTGGACAGAAGCTCTTCCACATCCTGATGATCGAGTTGAGTATGAATTTTGGACAAATAGTAATGATGAGTGTGGGCCAAAGTGTGATAGTCAGATTGAGTTTGTGAAAAACTTCAAAGGAGCTGCTCAGACGCTTGAGCAGAAAGGGTACACTCAATTTACTCCCCATTATATAACTTGGTATTGCCCAGATGCTTTTACTTTGAGTAAGCAATGCAAATCTCAATGCATCAATCATGGGAGATACTGTGCACCAGATCCCGAACAGGATTTCAGTAAAGGATATGATGGAAAGGATGTGGTTGTTCAAAATCTACGCCAAATCTGTTTCTTTAAAGTTGCAAATGAATCTGGAAAACCTTGGCTTTGGTGGGATTATGTCACTGACTTTTCAATCCGTTGTCCTATGAAAGAAAACAAGTACGACGAGGAATGTGCCAATGAAGTTATTAAATCGTTTGGTATGGATCTTAACAAGATAAAAGAATGTATTGGAGATCCAGAGGCAGATGTGGAGAACCCAATTCTTAAAGCTGAACAGGATGCACAGATTGGTAGGGGTTCCCGTGGAGATGTTACTATATTGCCGACTCTTGTTATAAATAACAGACAGTATAGAGGCAAGCTGGATAAAGGAGCAGTTCTGAAAGGCATTTGTTCTGGTTTTCAGGAGACAACAGAGCCTGCAATTTGTTTAACTGAAGACGTGGAAACAAATGAGTGTTTAACAAATAATGGTGGTTGCTGGCACAATAAGGATGCAAATGTTTCTGCATGCAGGGATACATTTCGAGGAAGAGTTTGTGAATGTCCTACTGTTCGAGGTGTGAAGTTCATTGGAGATGGCTATACTCACTGTGAACCGTCAGGAGCTTTACGCTGTGAAATAAATAATGGGGGTTGTTGGAAGGGCACCCAAGATGGAAGAACTTACTCTGCCTGTTCTGATGACCATACAAAGGGCTGCAAGTGCCCTCCAGGATTTAAAGGCGATGGAGTCCGCAATTGTGAAGGCTTTTTCATAATTAAGCACGATAAAAGCGAATCTCGTTTCAACATACTTGCAGCCAGTGTTGTATCTGTTTTCGATAATGTGGATGAGTGCAAGGAGAAGCTAGCATGCCAGTGCCCAGAGTGCAAATGTCAGAATACATGGGGCAGCTATGATTGCAGTTGCAGAAATGGTTTGCTGTATATGCACGAACATGATACATGTATAGGTAGCATGGGAAACACTGTGACAAGCTGGAGCGTTGTAAAGATTACTGTCCTTGTGTTAGCCATCACTGGGATCGCGGGATATGCAGTTTACAAGTACAGAATCCGGAGGTATATGGATTCTGAGATACGGGCTATCATGGCTCAATATATGCCCTTGGACAATCAAGGAGAGACTTCTAATCAGCATTTGCCATTTGGTTCCTCTGGGAAGAGGCTTGATTGGAGAAGCATGCTTTTCAAACTATTCCTCATTCTTGTCCTAGCTCTAGCTCCTGCTTCCGTTTCTGCTTTGGACACTGTTTTCAACGACGACGTTTTGGGATTGATAGTGTTCAAAGCTGGCCTTCAAGACCCTATGGGTAAATTGGTCACATGGAACGAAGACGATGAAACTCCCTGCAATTGGTTTGGTGTCAAATGCAATCCTAATACCAATAGGGTCTCTGAGCTTGTCCTTGATGGATTCTCTTTGTCTGGTCACATTGATCGTGGACTCCTAAGGTTGCAATTCCTTCAAATACTCTCACTTGCCAACAACAACTTCACTGGCACCATCAACTCTGCTCTTTCACACCTTGTAAATTTGCAAGTCATTGATTTCAGTGACAACAGTTTATCTGGACCCATTCCTGAACAGCTTTTCCTGCAATGTGGGTCTATAAGAGTTCTTTCATTTGCCAGAAACAACCTCATAGGAAACATCCCTCAATCCTTAACCTCTTGCTTCTCTCTGGAGATTCTTAACTTCTCCTCCAACCACCTTTCTGGAAAATTGCCTTCTGGGTTATGGTATTTGAGGGGGCTTCAGTCTCTGGATTTCTCTAACAACTTGCTTGAGGGGCAGATTCCTCCTGGAATTCAAAATTTGTACGATTTGAGATTTGTTAGCTTACACAAGAATCGATTGTCTGGAAAGCTTCCTGAGGATATTGGTGGCTGCTTACTTCTAAAATCAATCGATTTTAGTGAGAATATCCTTTCGGGTGGTCTTCCAGAGTCAATGCAGATGCTCAGTTCTTGCACTTATCTGAATTTACGAGGAAATTCTCTCACGGGTGAAGTCCCTCGTTGGATTGGGGAACTTAAAAATCTTGACACTTTAGATCTTTCTGCCAATAACTTTTCTGGTCAGCTGCCAAGTTCAATTGGCAACCTCCAATTGCTGAAGAAGTTTAATGTATCCACGAACTATTTAACTGGAAACTTGCCAGAATCCATGGCAAATTGTAATAACCTCTTGAGTATTGATGCTAGCCATAATCATTTGACTGGCAATCTCCCTACATGGATCTTTCGGGAAGCTATGCCAACTGTTCCATTTTCTTCGTACAGACTGGGAGAAAACCTTTCATCTCCAGCCCCTTTCCAGGGTCTTCAAGTTTTGGATTTATCTTCAAATGTTTTCTCTGGTCACATTCCATCTAATGTTGGAGAACTTAGTAACTTGCAGTTGCTGAACATATCCAGAAACCATCTCGTGGGTTCTATTCCGGGGAGCATTGGTGAACTAAAATCAGCATATGCTCTTGACTTCAGTGACAATCAATTAAATGGAAGCATCCCTGCTGAAATTGGAGGAGCGATCTCACTCAAGGAGTTGAGGCTGAAGAAGAACTCCCTCACTGGGGAAATCCCAGTCAACATTGACAAATGCTCCTTGTTAACGTCATTGATTCTTTCTCACAACAACCTAACAGGCTCAATTCCTGCTTCCGTTGCAAACCTCTCCAACCTTGAAGATGTAGACTTGTCTTTCAACAAACTGTCCGGAAGCCTGCCCAAGGAGCTGACTAATCTTTCCCACCTCCTCTCCTTCAATATCTCCCACAATCACCTTGAGGGAGAACTGCCAGTTGGGGGCTTCTTCAACACTATATCTCCCTTGTCTATATCACATAACCCATCTCTTTGTGGTGCTGTTGTCAATAGGTCCTGCCCCTCTGTCCATCCAAAACCGATTGTCCTAAACCCAAATTCTTCTGATACCAATGGAAATTCCCCCTCCCACAAGCATCATCATGAGATCATACTCAGCATATCTTCCATAATTGCCATTGGTGCAGCTTCTTTTATCCTACTTGGTGTAGTAGCTGTCACTATCCTCAATATCAGAGCAAGGTCCTCACAGTCACGGTCTGCTGCTCTTGTATTGTCTGCCGGGGAGGACTTTAGCTGCTCCCCAAAAACTAATCCAGACTACGGAAAGCTCATCATGTTTTCTGGAGATGCAGAGTTTGTAGTTGGCGCCCAAGCATTGCTGAACAAGGACTGCGAACTTGGTCGAGGTGGATTTGGGGTTGTTTACAAAACAGTGCTTCGAGATGGGTGTTTAGTTGCAATCAAGAAGTTGACTGTCACAAGCTTGATCAAGTCACGAGAAGATTTTGAGAGTGAAGTGAAGAAGCTGGGACAGATCAGGCATCACAATCTTGTGGCACTTGAAGGGTATTACTGGACAACCTCCTTGCAGCTCCTCATTTATGAATACGTCCCCAATGGAAGTTTGTATAAACATCTACATGATGGAACTGGCGACAATTGTTTGTCTTGGCGGCAGAGGTTCAAGATTGTTCTTGGGATGGCCAAAGGATTGGCTTATTTGCACCACAATAGTATTATTCACTACAACTTGAAGTCAACCAATGTTTTGATAGACAGTTCTGGGAAACCAAAAGTAGGGGACTATGGCTTGGCAAGGTTGTTGCCAATGTTGGACCGTTGCATCTTAAGCAGTAAAATCCAAAGCGCTTTGGGATACATGGCTCCAGAGTTTGCCTGCAAAACAGTGACTATAACTGAAAAGTGTGATGTGTATGGTTTTGGCATCTTGGTTTTGGAAGTGGTGACAGGAAAAAGACCTGTCGAGTACATGGAAGATGATGTTATAGTTCTCTGTGATATGGTGAGGGTAGCTTTGGATGAAGGCACGGTGGAGCAATGTGTTGATGAGAGGCTCCAATCGAACTTCCGTATTGAAGAGGCCATTCCTGTAATGAAACTAGGTTTGATATGTGCATCTCAAGTACCATCGAACAGGCCAGACATGAATGAGGTGGTCAATATATTAGAGTTGATCCAATCCCCCTCTGAAGTTGACGAGGAGTTGGAATGA 4863 43.06 MMAGKPYIFLSFCFILSVSTLGRFVVEKNSLKITSPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFEDAGISFKSKPGSLPTFVLADRGDCYFTTKAWNAQNGGAAAILVADDRLEPLITMDSPEQEKADDNYLKDITIPSALISKSLGDAIKKALSSGEMVNINLDWTEALPHPDDRVEYEFWTNSNDECGPKCDSQIEFVKNFKGAAQTLEQKGYTQFTPHYITWYCPDAFTLSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVVQNLRQICFFKVANESGKPWLWWDYVTDFSIRCPMKENKYDEECANEVIKSFGMDLNKIKECIGDPEADVENPILKAEQDAQIGRGSRGDVTILPTLVINNRQYRGKLDKGAVLKGICSGFQETTEPAICLTEDVETNECLTNNGGCWHNKDANVSACRDTFRGRVCECPTVRGVKFIGDGYTHCEPSGALRCEINNGGCWKGTQDGRTYSACSDDHTKGCKCPPGFKGDGVRNCEGFFIIKHDKSESRFNILAASVVSVFDNVDECKEKLACQCPECKCQNTWGSYDCSCRNGLLYMHEHDTCIGSMGNTVTSWSVVKITVLVLAITGIAGYAVYKYRIRRYMDSEIRAIMAQYMPLDNQGETSNQHLPFGSSGKRLDWRSMLFKLFLILVLALAPASVSALDTVFNDDVLGLIVFKAGLQDPMGKLVTWNEDDETPCNWFGVKCNPNTNRVSELVLDGFSLSGHIDRGLLRLQFLQILSLANNNFTGTINSALSHLVNLQVIDFSDNSLSGPIPEQLFLQCGSIRVLSFARNNLIGNIPQSLTSCFSLEILNFSSNHLSGKLPSGLWYLRGLQSLDFSNNLLEGQIPPGIQNLYDLRFVSLHKNRLSGKLPEDIGGCLLLKSIDFSENILSGGLPESMQMLSSCTYLNLRGNSLTGEVPRWIGELKNLDTLDLSANNFSGQLPSSIGNLQLLKKFNVSTNYLTGNLPESMANCNNLLSIDASHNHLTGNLPTWIFREAMPTVPFSSYRLGENLSSPAPFQGLQVLDLSSNVFSGHIPSNVGELSNLQLLNISRNHLVGSIPGSIGELKSAYALDFSDNQLNGSIPAEIGGAISLKELRLKKNSLTGEIPVNIDKCSLLTSLILSHNNLTGSIPASVANLSNLEDVDLSFNKLSGSLPKELTNLSHLLSFNISHNHLEGELPVGGFFNTISPLSISHNPSLCGAVVNRSCPSVHPKPIVLNPNSSDTNGNSPSHKHHHEIILSISSIIAIGAASFILLGVVAVTILNIRARSSQSRSAALVLSAGEDFSCSPKTNPDYGKLIMFSGDAEFVVGAQALLNKDCELGRGGFGVVYKTVLRDGCLVAIKKLTVTSLIKSREDFESEVKKLGQIRHHNLVALEGYYWTTSLQLLIYEYVPNGSLYKHLHDGTGDNCLSWRQRFKIVLGMAKGLAYLHHNSIIHYNLKSTNVLIDSSGKPKVGDYGLARLLPMLDRCILSSKIQSALGYMAPEFACKTVTITEKCDVYGFGILVLEVVTGKRPVEYMEDDVIVLCDMVRVALDEGTVEQCVDERLQSNFRIEEAIPVMKLGLICASQVPSNRPDMNEVVNILELIQSPSEVDEELE 1620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 37115218 37126840 - ClCG10G022770.2 Cla10g02150 283809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla10g02150 1620 Pfam Leucine rich repeat 1138 1196 IPR001611 GO:0005515
Cla10g02150 1620 ProSitePatterns Protein kinases ATP-binding region signature. 1343 1366 IPR017441 GO:0005524
Cla10g02150 1620 SMART egfca_6 541 583 IPR001881 GO:0005509
Cla10g02150 1620 Pfam Protein tyrosine and serine/threonine kinase 1339 1605 IPR001245 GO:0004672|GO:0006468
Cla10g02150 1620 Gene3D Phosphorylase Kinase; domain 1 1327 1413 - -
Cla10g02150 1620 Gene3D Ribonuclease Inhibitor 689 800 IPR032675 -
Cla10g02150 1620 ProSiteProfiles Protein kinase domain profile. 1337 1609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla10g02150 1620 ProSitePatterns Calcium-binding EGF-like domain signature. 541 567 IPR018097 GO:0005509
Cla10g02150 1620 SMART LRR_typ_2 1063 1087 IPR003591 -
Cla10g02150 1620 SMART LRR_typ_2 1183 1207 IPR003591 -
Cla10g02150 1620 SMART LRR_typ_2 752 775 IPR003591 -
Cla10g02150 1620 SMART LRR_typ_2 873 897 IPR003591 -
Cla10g02150 1620 SMART LRR_typ_2 776 800 IPR003591 -
Cla10g02150 1620 SMART LRR_typ_2 849 872 IPR003591 -
Cla10g02150 1620 SMART LRR_typ_2 945 969 IPR003591 -
Cla10g02150 1620 SMART LRR_typ_2 1159 1182 IPR003591 -
Cla10g02150 1620 Pfam Leucine rich repeat N-terminal domain 686 725 IPR013210 -
Cla10g02150 1620 CDD STKc_IRAK 1343 1609 - -
Cla10g02150 1620 Pfam PA domain 70 162 IPR003137 -
Cla10g02150 1620 SUPERFAMILY L domain-like 703 1012 - -
Cla10g02150 1620 Gene3D Ribonuclease Inhibitor 908 1021 IPR032675 -
Cla10g02150 1620 SUPERFAMILY PA domain 93 169 IPR046450 -
Cla10g02150 1620 SUPERFAMILY Protein kinase-like (PK-like) 1341 1609 IPR011009 -
Cla10g02150 1620 Gene3D - 22 185 - -
Cla10g02150 1620 Gene3D Laminin 408 458 - -
Cla10g02150 1620 Gene3D Laminin 470 583 - -
Cla10g02150 1620 Gene3D Ribonuclease Inhibitor 801 907 IPR032675 -
Cla10g02150 1620 CDD EGF_CA 541 572 - -
Cla10g02150 1620 SUPERFAMILY L domain-like 950 1214 - -
Cla10g02150 1620 Gene3D Ribonuclease Inhibitor 1024 1232 IPR032675 -
Cla10g02150 1620 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 667 1611 - -
Cla10g02150 1620 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 667 1611 - -
Cla10g02150 1620 Gene3D Transferase(Phosphotransferase) domain 1 1414 1619 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00680 Cla-Chr2:7846474 Cla10g02150 Cla-Chr10:37115218 7.72E-37 dispersed
Cla07g00487 Cla-Chr7:6924354 Cla10g02150 Cla-Chr10:37115218 0 dispersed
Cla10g00997 Cla-Chr10:23251564 Cla10g02150 Cla-Chr10:37115218 0 dispersed
Cla10g02150 Cla-Chr10:37115218 Cla05g00374 Cla-Chr5:3422514 3.43E-128 dispersed
Cla01g02522 Cla-Chr1:38890259 Cla10g02150 Cla-Chr10:37115218 0 transposed
Cla07g01500 Cla-Chr7:32238769 Cla10g02150 Cla-Chr10:37115218 0 transposed
Cla10g02150 Cla-Chr10:37115218 Cla11g00542 Cla-Chr11:6152622 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80901 PF07714 PK_Tyr_Ser-Thr 2.70E-41 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla10g02150 - - csv:101222148 1723.37