Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00037 ATGGAGCATGGAGATCGAATTGAAGAAGGTAGCTCCAGGTTGCTGCGGGGCAATAGCGTTGCTGGGAGTAGTAATGATTACAGGTGGGTTGACGGTAGTGAAGTCGACTCCGAATCGCCTCCATGGTCGCTGTTTGAAGAAAGAGAGAGCGGGGAAGGATATGGATCTATCAGAAGGAGGTTAATTAAGAAGCCCAAGAGAGTTGATTCTTTTGATGTTGAAGCAATGGAGATTGCCGGTGCCAACTATCACCATTTAAAGGATGTTTCCCTTTGGCAAACTATTGCTATAGCATTTCAAACACTTGGTGTTGTGTACGGTGACATGGGTACAAGTCCATTATACGTCTTTGCTGATGTATTTAGCAAGGTGCATATTGAGGCAGATGTTGATGTCTTGGGGGCTCTTTCCTTAGTGATTTATACAATTGCTCTTATTCCTTTGGCAAAATATGTTTTCGTAGTGCTCAGAGCCAACGACAATGGGGAAGGAGGAACATTTGCATTGTATTCGCTTATCTGTAGGTATGCCAAAGTTAACATGCTGCCAAACCGTCAGCCAGCTGACGAACATATCTCAAGTTTTAAGCTTAAACTTCCCACTCCAGAGTTGGAAAGGGCCTTACATATCAAAGAGACTCTGGAGAAGAGATCATCCTTGAAAACTCTTATATTGCTGTTGGTTCTCATGGGCACTTCAATGATTATTGGGGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCTGTGAGTGGTCTGCAGGGACAAATAAAGTCATTTGATACAAATGCTGTGGTTATTGTTTCAATTATAATCCTTGTGGCCTTGTTCAGCATACAGAAATTTGGAACTGGGAAAGTAGGATTTATGTTTGCTCCTGTCCTTGCTTTGTGGTTTTTTAGTTTGGGATCTATTGGAATTTACAATGTAGTGAAGTATGATCCCACCGTTGTAAGAGCTCTCAATCCCACTTACATCTATTTATTCTTCAAGAAAAATTCAAAAAATGCATGGTCAGCTCTCGGTGGTTGTGTTTTGTGCATAACAGGAGCTGAAGCCATGTTCGCCGATCTAGGCCATTTCACTGTGCCAGCCATACAGATTGCCTTCACATGTGTTGTTTTCCCCTGCCTTCTCTTGGCATACATGGGCCAGGCTGCATACCTTTTGAAACATCCAGATTCTGCAGCAAGAATATTTTATGATTCTGTGCCAGCAAGTCTTTTTTGGCCGGTCTTTGTGACAGCAACACTTGCTGCTATGATTGCGAGCCAAGCAATGATTTCTGCAACCTTTTCTTGTGTCAAGCAATCTATGGCTCTTGGATGTTTTCCAAGAATGAAGATAGTTCACACCTCTAAGAGACGAATGGGTCAAATTTACATCCCTGTGATCAATTGGTTTTTGATGATAATGTGCATATTTGTCGTTGCAATATTTCGAAGGACTACAGACATCGCCAATGCTTATGGTATTGCTGAAGTTGGTGTGATGTTGGTGAGCACTGTCCTGGTGACTCTAGTAATGCTCCTAATCTGGCAGACAAATTTGTTTCTTGCGTTTTGTTTCCCACTTGTATTTGGGTCAGTGGAAGTTATCTACTTATCTGCAGTTCTATCAAAAATCAGAGAGGGCGGATGGTTGCCACTTGCTTTTGCTTCCGTCTTCCTCTCTGTGATGTACACATGGAACTATGGGAGTGTGTTGAAGTACCAAAGTGAGGTGAGAGACAAAATATCAACGGATTTCTTGCTTGAACTGGGTTCTACACTTGGAACTGTAAGAGTTCCAGGAATTGGTCTCCTGTACAATGAGCTTGTCCAAGGCATTCCTGCAATTTTTGGGCAATTTCTTCTTAGCCTTCCAGCCATCCACTCCACAATTGTGTTTGTGTGCATTAAATATGTTCCAATCCCCGTGGTTCCACAAGAGGAAAGGTTTTTGTTTAGGAGGGTTGGCCCAAAAGATTACCATATGTTCCGTTGCATAGCAAGATATGGTTACAAGGATGTGCGGAAGGAAGATCACCATGCGTTTGAGCAACTTTTGATGGAAAGCCTCGAGAAGTTCTTAAGAAAGGAGTCTCAAGATCTTGCCCTGGAGAGCAATCTGAATGAGTTGCAATTCGACAATATTTCAGAGAGGTCGCGGGATTCTCCATCTCGAGGTGCTGCTGATGTGAATGAGGAGCTGAGAATTCCATTGATGGAACAGGAAAGAACTGTGGATTCGGAAGAAGGTTATGGGGTGCGGTTGCCATCCAGCATTATGGCATCAGATGACGACCCTAGTTTGGAGTATGAGCTATCAGCCCTTCGGGAAGCAATGGATTCAGGATTTACGTATCTATTGGCCCAAGGGGACGTTCGAGCAAAGAAAAACTCATTTTTTGTTAAGAAGCTTGTTATAAACTATTTCTATGCATTCCTAAGGAGGAACTGTAGGGGTGGTGCAGCAACAATGCGAGTTCCCCACATGAACATTATGCAAGTTGGGATGACTTACATGGTTTGA 2517 42.99 MEHGDRIEEGSSRLLRGNSVAGSSNDYRWVDGSEVDSESPPWSLFEERESGEGYGSIRRRLIKKPKRVDSFDVEAMEIAGANYHHLKDVSLWQTIAIAFQTLGVVYGDMGTSPLYVFADVFSKVHIEADVDVLGALSLVIYTIALIPLAKYVFVVLRANDNGEGGTFALYSLICRYAKVNMLPNRQPADEHISSFKLKLPTPELERALHIKETLEKRSSLKTLILLLVLMGTSMIIGDGILTPAISVMSAVSGLQGQIKSFDTNAVVIVSIIILVALFSIQKFGTGKVGFMFAPVLALWFFSLGSIGIYNVVKYDPTVVRALNPTYIYLFFKKNSKNAWSALGGCVLCITGAEAMFADLGHFTVPAIQIAFTCVVFPCLLLAYMGQAAYLLKHPDSAARIFYDSVPASLFWPVFVTATLAAMIASQAMISATFSCVKQSMALGCFPRMKIVHTSKRRMGQIYIPVINWFLMIMCIFVVAIFRRTTDIANAYGIAEVGVMLVSTVLVTLVMLLIWQTNLFLAFCFPLVFGSVEVIYLSAVLSKIREGGWLPLAFASVFLSVMYTWNYGSVLKYQSEVRDKISTDFLLELGSTLGTVRVPGIGLLYNELVQGIPAIFGQFLLSLPAIHSTIVFVCIKYVPIPVVPQEERFLFRRVGPKDYHMFRCIARYGYKDVRKEDHHAFEQLLMESLEKFLRKESQDLALESNLNELQFDNISERSRDSPSRGAADVNEELRIPLMEQERTVDSEEGYGVRLPSSIMASDDDPSLEYELSALREAMDSGFTYLLAQGDVRAKKNSFFVKKLVINYFYAFLRRNCRGGAATMRVPHMNIMQVGMTYMV 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 492278 497803 + ClCG11G000370.2 Cla11g00037 283859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00037 838 MobiDBLite consensus disorder prediction 1 46 - -
Cla11g00037 838 Pfam K+ potassium transporter 98 671 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla11g00037 838 PANTHER POTASSIUM TRANSPORTER 12-RELATED 11 838 - -
Cla11g00037 838 TIGRFAM kup: potassium uptake protein 97 838 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla11g00037 838 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 11 838 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g00882 Cla-Chr10:20126885 Cla11g00037 Cla-Chr11:492278 7.05E-105 dispersed
Cla10g01019 Cla-Chr10:23590456 Cla11g00037 Cla-Chr11:492278 0 dispersed
Cla11g00037 Cla-Chr11:492278 Cla03g00054 Cla-Chr3:572640 0 dispersed
Cla11g00037 Cla-Chr11:492278 Cla09g01844 Cla-Chr9:36099892 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00037 K03549 - csv:101202804 1517.29