Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00054 | ATGTTCGCTTTGGGAAATTCAGCATCGAGCTACAAAACCCTACTCCACTTCCCAACTTCATCGCCTCCCACGGCCTCTCGTGCTTCTGCCACTACGCTACCCTCCCAGGTCTCCTATTCTCCATTTCAATCTTCAACATCTGAAACCAGACCGTGGAGCATTTCTCCCTCCAGCCATGGCACTGGAAAGACAAATAAAAATTCTTTCAAGGCTCTCATTGCTGCAGAATACAATGGAGTCGAAGTGAAATTGGTCCCAGACTTTGAGATGGGAGTCTCAAACAAGACTCCGGAGTTTATCAAGATGAACCCTATTGGGAAGGTCCCTGTATTAGAAACGCCCGATGGCCCCATATTCGAGAGTAACGCTATAGCCCGTTATGTTTCTCGCTTGAAGGCTGATAGTCCTCTCTATGGTTCATCTCTGATAGATTATGGACATATTGAACAATGGATGGATTTTGCAACATTGGAGATAGATTCTAATATTTTGACTTGGTTTAGACCTAGAATGGGGAGAGCTGCTTATCTTCCTCCTGTCGAGGAAGCTGCAATTGCTGCATTGAAGAGAGCTTTGGGAGCTTTGAATACACACCTGGCTTCAAATACATACCTAGTTGGTCATTCTGTTACACTAGCTGACATAATCTTGACTTGCAACCTGTTCTTGGGTTTTACTAAGCTCATGACTAAGAGCTTTACCTCGGAGTTCCCACATATTGACCGGTACTTCTGGACCTTGGTCAATCAGCCAAACTTCAAAAAAATCTTGGGTGAGGTGAAGCAGGCAGAGTCAGTTCTTCCTGTTCAATCTGTAAAGAAACCTGATGAATCTTCTAAGCAAAAGCACACGGATGAGAGTAAGAAAGAACCTAAAAAGGAAGCTGAAAAAGAGAAGCCAAAGGCTGTAGCTGGTGAGGGAGAGGATGAGGCACCAAAGCCAAAACCAAAAAACCCTCTTGATTTGCTACCTCCGAGTAAGATGATTCTGGATGAGTGGAAGCGGCTATACTCGAATACCAAAACCAACTTTCGGGAGGTTGCAATTAAAGGATTTTGGGACATGTACGATCCAGAGGGATATTCTCTTTGGTTCTGTGAATACAAGTACAACGATGAGAATACTGTTTCATTCGTGACTTTGAACAAGGTTGGTGGCTTCCTCCAGCGAATGGATCTCGCTCGTAAGTATGCTTTTGGGAAGATGTTAGTGATTGGATCAGAACCTCCATTTAAGGTGAAGGGTTTATGGCTTTTCCGTGGACAAGAGATACCCAAATTCGTCTTGGACGAGTGCTACGACATGGAACTTTATGAATGGAGGAAGGTTGATATATCAGATGAGGCACAAAAGGAACGCGTAAACCAGATGATTGAAGATCAGGAGCCTTTTGAAGGGGAGGCTTTGTTGGATGCCAAATGCTTCAAGTGA | 1431 | 44.16 | MFALGNSASSYKTLLHFPTSSPPTASRASATTLPSQVSYSPFQSSTSETRPWSISPSSHGTGKTNKNSFKALIAAEYNGVEVKLVPDFEMGVSNKTPEFIKMNPIGKVPVLETPDGPIFESNAIARYVSRLKADSPLYGSSLIDYGHIEQWMDFATLEIDSNILTWFRPRMGRAAYLPPVEEAAIAALKRALGALNTHLASNTYLVGHSVTLADIILTCNLFLGFTKLMTKSFTSEFPHIDRYFWTLVNQPNFKKILGEVKQAESVLPVQSVKKPDESSKQKHTDESKKEPKKEAEKEKPKAVAGEGEDEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCEYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFVLDECYDMELYEWRKVDISDEAQKERVNQMIEDQEPFEGEALLDAKCFK | 476 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 710382 | 713712 | - | ClCG11G000570.2 | Cla11g00054 | 283876 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00054 | 476 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 61 | 476 | IPR044628 | GO:0004364 | |
Cla11g00054 | 476 | Pfam | Elongation factor 1 gamma, conserved domain | 315 | 423 | IPR001662 | GO:0003746|GO:0006414 | |
Cla11g00054 | 476 | MobiDBLite | consensus disorder prediction | 268 | 323 | - | - | |
Cla11g00054 | 476 | Gene3D | Translation elongation factor EF1B, gamma chain, conserved domain | 316 | 476 | IPR036433 | GO:0003746|GO:0006414 | |
Cla11g00054 | 476 | SFLD | Main (cytGST) | 66 | 244 | - | - | |
Cla11g00054 | 476 | SUPERFAMILY | GST C-terminal domain-like | 136 | 268 | IPR036282 | - | |
Cla11g00054 | 476 | Gene3D | Glutaredoxin | 61 | 128 | - | - | |
Cla11g00054 | 476 | Gene3D | - | 134 | 271 | - | - | |
Cla11g00054 | 476 | CDD | GST_N_EF1Bgamma | 61 | 131 | - | - | |
Cla11g00054 | 476 | MobiDBLite | consensus disorder prediction | 275 | 316 | - | - | |
Cla11g00054 | 476 | MobiDBLite | consensus disorder prediction | 21 | 65 | - | - | |
Cla11g00054 | 476 | SFLD | Glutathione Transferase (cytosolic) | 66 | 244 | IPR040079 | - | |
Cla11g00054 | 476 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 55 | 136 | IPR004045 | - | |
Cla11g00054 | 476 | PANTHER | - | 61 | 476 | - | - | |
Cla11g00054 | 476 | CDD | GST_C_EF1Bgamma_like | 144 | 264 | - | - | |
Cla11g00054 | 476 | Pfam | Glutathione S-transferase, C-terminal domain | 182 | 251 | IPR004046 | - | |
Cla11g00054 | 476 | Pfam | Glutathione S-transferase, N-terminal domain | 66 | 130 | IPR004045 | - | |
Cla11g00054 | 476 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 316 | 476 | IPR001662 | GO:0003746|GO:0006414 | |
Cla11g00054 | 476 | SUPERFAMILY | Thioredoxin-like | 64 | 139 | IPR036249 | - | |
Cla11g00054 | 476 | SUPERFAMILY | eEF1-gamma domain | 316 | 476 | IPR036433 | GO:0003746|GO:0006414 | |
Cla11g00054 | 476 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 141 | 269 | IPR010987 | - | |
Cla11g00054 | 476 | SMART | EF1G_2 | 315 | 423 | IPR001662 | GO:0003746|GO:0006414 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla10g00677 | Cla-Chr10:10425459 | Cla11g00054 | Cla-Chr11:710382 | 0 | dispersed | |
Cla11g00054 | Cla-Chr11:710382 | Cla07g01007 | Cla-Chr7:26425770 | 9.06E-06 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00054 | K03233 | - | zju:107412556 | 711.835 |