Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00054 ATGTTCGCTTTGGGAAATTCAGCATCGAGCTACAAAACCCTACTCCACTTCCCAACTTCATCGCCTCCCACGGCCTCTCGTGCTTCTGCCACTACGCTACCCTCCCAGGTCTCCTATTCTCCATTTCAATCTTCAACATCTGAAACCAGACCGTGGAGCATTTCTCCCTCCAGCCATGGCACTGGAAAGACAAATAAAAATTCTTTCAAGGCTCTCATTGCTGCAGAATACAATGGAGTCGAAGTGAAATTGGTCCCAGACTTTGAGATGGGAGTCTCAAACAAGACTCCGGAGTTTATCAAGATGAACCCTATTGGGAAGGTCCCTGTATTAGAAACGCCCGATGGCCCCATATTCGAGAGTAACGCTATAGCCCGTTATGTTTCTCGCTTGAAGGCTGATAGTCCTCTCTATGGTTCATCTCTGATAGATTATGGACATATTGAACAATGGATGGATTTTGCAACATTGGAGATAGATTCTAATATTTTGACTTGGTTTAGACCTAGAATGGGGAGAGCTGCTTATCTTCCTCCTGTCGAGGAAGCTGCAATTGCTGCATTGAAGAGAGCTTTGGGAGCTTTGAATACACACCTGGCTTCAAATACATACCTAGTTGGTCATTCTGTTACACTAGCTGACATAATCTTGACTTGCAACCTGTTCTTGGGTTTTACTAAGCTCATGACTAAGAGCTTTACCTCGGAGTTCCCACATATTGACCGGTACTTCTGGACCTTGGTCAATCAGCCAAACTTCAAAAAAATCTTGGGTGAGGTGAAGCAGGCAGAGTCAGTTCTTCCTGTTCAATCTGTAAAGAAACCTGATGAATCTTCTAAGCAAAAGCACACGGATGAGAGTAAGAAAGAACCTAAAAAGGAAGCTGAAAAAGAGAAGCCAAAGGCTGTAGCTGGTGAGGGAGAGGATGAGGCACCAAAGCCAAAACCAAAAAACCCTCTTGATTTGCTACCTCCGAGTAAGATGATTCTGGATGAGTGGAAGCGGCTATACTCGAATACCAAAACCAACTTTCGGGAGGTTGCAATTAAAGGATTTTGGGACATGTACGATCCAGAGGGATATTCTCTTTGGTTCTGTGAATACAAGTACAACGATGAGAATACTGTTTCATTCGTGACTTTGAACAAGGTTGGTGGCTTCCTCCAGCGAATGGATCTCGCTCGTAAGTATGCTTTTGGGAAGATGTTAGTGATTGGATCAGAACCTCCATTTAAGGTGAAGGGTTTATGGCTTTTCCGTGGACAAGAGATACCCAAATTCGTCTTGGACGAGTGCTACGACATGGAACTTTATGAATGGAGGAAGGTTGATATATCAGATGAGGCACAAAAGGAACGCGTAAACCAGATGATTGAAGATCAGGAGCCTTTTGAAGGGGAGGCTTTGTTGGATGCCAAATGCTTCAAGTGA 1431 44.16 MFALGNSASSYKTLLHFPTSSPPTASRASATTLPSQVSYSPFQSSTSETRPWSISPSSHGTGKTNKNSFKALIAAEYNGVEVKLVPDFEMGVSNKTPEFIKMNPIGKVPVLETPDGPIFESNAIARYVSRLKADSPLYGSSLIDYGHIEQWMDFATLEIDSNILTWFRPRMGRAAYLPPVEEAAIAALKRALGALNTHLASNTYLVGHSVTLADIILTCNLFLGFTKLMTKSFTSEFPHIDRYFWTLVNQPNFKKILGEVKQAESVLPVQSVKKPDESSKQKHTDESKKEPKKEAEKEKPKAVAGEGEDEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCEYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFVLDECYDMELYEWRKVDISDEAQKERVNQMIEDQEPFEGEALLDAKCFK 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 710382 713712 - ClCG11G000570.2 Cla11g00054 283876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00054 476 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 61 476 IPR044628 GO:0004364
Cla11g00054 476 Pfam Elongation factor 1 gamma, conserved domain 315 423 IPR001662 GO:0003746|GO:0006414
Cla11g00054 476 MobiDBLite consensus disorder prediction 268 323 - -
Cla11g00054 476 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 316 476 IPR036433 GO:0003746|GO:0006414
Cla11g00054 476 SFLD Main (cytGST) 66 244 - -
Cla11g00054 476 SUPERFAMILY GST C-terminal domain-like 136 268 IPR036282 -
Cla11g00054 476 Gene3D Glutaredoxin 61 128 - -
Cla11g00054 476 Gene3D - 134 271 - -
Cla11g00054 476 CDD GST_N_EF1Bgamma 61 131 - -
Cla11g00054 476 MobiDBLite consensus disorder prediction 275 316 - -
Cla11g00054 476 MobiDBLite consensus disorder prediction 21 65 - -
Cla11g00054 476 SFLD Glutathione Transferase (cytosolic) 66 244 IPR040079 -
Cla11g00054 476 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 55 136 IPR004045 -
Cla11g00054 476 PANTHER - 61 476 - -
Cla11g00054 476 CDD GST_C_EF1Bgamma_like 144 264 - -
Cla11g00054 476 Pfam Glutathione S-transferase, C-terminal domain 182 251 IPR004046 -
Cla11g00054 476 Pfam Glutathione S-transferase, N-terminal domain 66 130 IPR004045 -
Cla11g00054 476 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 316 476 IPR001662 GO:0003746|GO:0006414
Cla11g00054 476 SUPERFAMILY Thioredoxin-like 64 139 IPR036249 -
Cla11g00054 476 SUPERFAMILY eEF1-gamma domain 316 476 IPR036433 GO:0003746|GO:0006414
Cla11g00054 476 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 141 269 IPR010987 -
Cla11g00054 476 SMART EF1G_2 315 423 IPR001662 GO:0003746|GO:0006414
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g00677 Cla-Chr10:10425459 Cla11g00054 Cla-Chr11:710382 0 dispersed
Cla11g00054 Cla-Chr11:710382 Cla07g01007 Cla-Chr7:26425770 9.06E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00054 K03233 - zju:107412556 711.835