Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00055 | TTTTCCCTGAGTTGGACCTCAACTGCTGTTCAACTGATCAAATCCGCGAAATTAGAATTTTCCGTGGTTGCCGGTGGGATTATGGGTTGCATTTGCTCGAAGGGAATTCCAGCTAACGACTATGTTGCTGAGAATCATTCCAAAGAGAGGCATTTGAAGTCTAATAGATCTTCCAGACATGGGGCTTCATTGAGGAAAGAAGAATCCGTGTTACATTCTGATGGAGGGCAAAGTGATGCAATGGCGCGATTGATATTGAACCAACATGGGGAAGAGAATGCTGGATCAACATCTGAATCGGATGATGCTGAGAAGGCAACACCCATTGGAAAAGCTGCCAGTGCCAAGCCACTGCGTCAAGAACAACGGCCAAGTATGGAGGATGGAGAAAAGAGAGTAGGAGTACATAACAATAATAATAATGCAACACCTAGAATAATCGGTGTTGTAATTGGGGAAAAGGGTGCTTTGGTTATTGCTGGATGGCCTTCTTGGCTGACATCTGTGGCTGGAGAAGCAATCAATGGATGGGTTCCTAGAAAGGCAGACTCTTTTCAGAAGTTGGATAAGATTGGACAAGGAACGTACAGCAGTGTGTACAGGGCCCGTGATATTGAAACAAACAAGATTGTTGCATTGAAGAAGGTGCGATTTGCTAACATGGATCCTGAAAGTGTTCGTTTTATGGCCAGGGAAATTCTTATCCTACGTAGGCTTGACCACCCCAATGTCATGAAGCTTGAAGGTCTTATCACTTCAAGGGTATCGGGCAGTTTATACCTCATATTTGAGTATATGGAACATGATCTTGCAGGGTTGGTAGCAACCCCAGGGATCAAGTTCACTGAAGCACAGATAAAATGCTATATGAAACAGCTGCTTTGTGGCCTTGAACATTGCCATGCGCAGGGAGTTTTGCACCGTGACATCAAGGGCTCAAATCTTCTGATTGACAATAATGGTAATCTAAAGATAGGTGATTTTGGGCTATCAACCTTTTTCCGTTCCCGGCAAAAGCAGCCTCTTACAAGTCGTGTGGTAACTTTGTGGTATCGGCCACCTGAGCTTTTGCTTGGTGCAACGGACTATGGAGTTTCTGTAGATTTGTGGAGTGCTGGTTGCATTCTTGCAGAACTGTATGCTGGAAAGCCTATCATGCCTGGAAGAACAGAGGTGGAGCAACTACACAAGATCTTCAAACTCTGTGGCTCCCCGTCTGAAGAATACTGGAAAAAGTCAAAATTACCGCATGCCACCATCTTTAAACCTCAACATCCTTACAAGCGGTGTGTTGCTGAGACATTCAAAGACTTTCCTTTCTCTGCATTGGCCCTTTTGGATGTCCTTCTCGCGGTGGAACCTGATGGCCGTGGAACAGCATCCTCTGCCCTTCAAAGTGAGTTCTTTACCACTGAACCGCTTCCCTCGGATCCCTCTGCTTTGCCAAAGTACCCACCTTGTAAGGAGTTTGATGTAAAGCTTCGAGATGAGGAATCTCGAAGAAGAAGAGCTCCTATCTGCATTGCACATGAACATGAAGCAGGTCGTAAATTTTCCCGAGAATCAAAAGCAATTCCTGCACCAGATGCGAATGCTGAATTGCAGGCATCCATACAGAAGAAACAAGGGCAGCAGAATCCTACAAGTGTCAGTGAAAAGTATAATCATGAAGAGGACGGTGGCTCTGGCTTTTGCATCGGCCCCCCAAGAGAAGCAACGCAAATGCAGCCAACTGCATTGGGTTCTTCACGATACATGAACGGGAGTCAGGGTGATAATCTAAGAGGTTCTTCAGTTGGGGCAAAAGGTGCAGAACTTAGAAAACAGAGATCTTTTATGCAGCATGGTGCTGGACAATTATCTCGGTATTCCAATTCTGTTGCAGTTCGAGGTGGTTCACGATTTGGCTGTGGTGGAGAGAGTAGTGCTAATTCACACTGGCCAGAAGAGTGTTTTAATGTGTCATATAACCATTTCAATGGTGGCGACTCTTCAGAAAAGCATGAATGGTCTCACCATTTACTAGACAGGCCAAAATCTTCATATAAGATAGATGATGATCAATCAGCTGGAAAAGAGTCTACTATGGTAAAGTATCCAAGTTATGCTCCGAAGAAGAGAATTCACTACTCAGGACCATTGATGCCTCCCGGGGGAAACCTTGAGGAAATGTTAAAAGAGCACGAGAAACAAATCCAGCATGCAGTGCGCAAGGCTCGTATTGACAAAGCTAAGACAAAAAAGACGTACGACGACAAAGGTCAGATGGAATCATTGCTTCACCATGCGAGAAATGGCAATTGA | 2304 | 44.88 | FSLSWTSTAVQLIKSAKLEFSVVAGGIMGCICSKGIPANDYVAENHSKERHLKSNRSSRHGASLRKEESVLHSDGGQSDAMARLILNQHGEENAGSTSESDDAEKATPIGKAASAKPLRQEQRPSMEDGEKRVGVHNNNNNATPRIIGVVIGEKGALVIAGWPSWLTSVAGEAINGWVPRKADSFQKLDKIGQGTYSSVYRARDIETNKIVALKKVRFANMDPESVRFMAREILILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLVATPGIKFTEAQIKCYMKQLLCGLEHCHAQGVLHRDIKGSNLLIDNNGNLKIGDFGLSTFFRSRQKQPLTSRVVTLWYRPPELLLGATDYGVSVDLWSAGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRCVAETFKDFPFSALALLDVLLAVEPDGRGTASSALQSEFFTTEPLPSDPSALPKYPPCKEFDVKLRDEESRRRRAPICIAHEHEAGRKFSRESKAIPAPDANAELQASIQKKQGQQNPTSVSEKYNHEEDGGSGFCIGPPREATQMQPTALGSSRYMNGSQGDNLRGSSVGAKGAELRKQRSFMQHGAGQLSRYSNSVAVRGGSRFGCGGESSANSHWPEECFNVSYNHFNGGDSSEKHEWSHHLLDRPKSSYKIDDDQSAGKESTMVKYPSYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTKKTYDDKGQMESLLHHARNGN | 767 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 721799 | 734551 | + | ClCG11G000580.1 | Cla11g00055 | 283877 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00055 | 767 | MobiDBLite | consensus disorder prediction | 47 | 77 | - | - | |
Cla11g00055 | 767 | MobiDBLite | consensus disorder prediction | 91 | 139 | - | - | |
Cla11g00055 | 767 | SUPERFAMILY | Protein kinase-like (PK-like) | 179 | 476 | IPR011009 | - | |
Cla11g00055 | 767 | SMART | serkin_6 | 185 | 469 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00055 | 767 | MobiDBLite | consensus disorder prediction | 537 | 569 | - | - | |
Cla11g00055 | 767 | CDD | STKc_CDK9_like | 185 | 469 | - | - | |
Cla11g00055 | 767 | PANTHER | BNACNNG19830D PROTEIN | 135 | 746 | - | - | |
Cla11g00055 | 767 | ProSitePatterns | Protein kinases ATP-binding region signature. | 191 | 214 | IPR017441 | GO:0005524 | |
Cla11g00055 | 767 | Gene3D | Phosphorylase Kinase; domain 1 | 172 | 267 | - | - | |
Cla11g00055 | 767 | Gene3D | Transferase(Phosphotransferase) domain 1 | 268 | 507 | - | - | |
Cla11g00055 | 767 | PANTHER | CELL DIVISION PROTEIN KINASE | 135 | 746 | - | - | |
Cla11g00055 | 767 | Pfam | Protein kinase domain | 185 | 469 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00055 | 767 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 305 | 317 | IPR008271 | GO:0004672|GO:0006468 | |
Cla11g00055 | 767 | MobiDBLite | consensus disorder prediction | 737 | 759 | - | - | |
Cla11g00055 | 767 | MobiDBLite | consensus disorder prediction | 537 | 551 | - | - | |
Cla11g00055 | 767 | MobiDBLite | consensus disorder prediction | 737 | 767 | - | - | |
Cla11g00055 | 767 | ProSiteProfiles | Protein kinase domain profile. | 185 | 469 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00055 | 767 | Coils | Coil | 718 | 738 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g01008 | Cla-Chr5:10158398 | Cla11g00055 | Cla-Chr11:721799 | 0 | dispersed | |
Cla08g00068 | Cla-Chr8:1510168 | Cla11g00055 | Cla-Chr11:721799 | 0 | dispersed | |
Cla11g00055 | Cla-Chr11:721799 | Cla11g00429 | Cla-Chr11:4948841 | 4.06E-179 | dispersed | |
Cla11g00055 | Cla-Chr11:721799 | Cla03g01582 | Cla-Chr3:31590266 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80906 | PF00069 | Pkinase | 3.60E-68 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00055 | - | - | csv:101214435 | 1361.28 |