Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00064 ATGATGGAGGAAGATGCCAAAGAACAGCCGAAGGCTACAGAACTTCAGGCAAAGAAAACCCATGTTTCTCAGTTGCCTTGCGACGGTGATGGCATTTGCATGCTCTGCAAGGCCAAGCCTTCTGACTTGGAGACGATCACTTGCAAAACTTGCGTCACCCCTTGGCATGTTAGTTGTCTCTCAAATCCCCCTGAAACCCTTGCATCCACCCTTCAATGGGACTGTCCTGATTGTTCCACCCCTCCCGAAGATGTTCCCCTTCCTTCGCTAGGCAACCATTCACTCCCCACTGCGCCTTCTAGTGACCTTGTTGCTGCGATTCGAGCCATTGAGGCCGATGCCTCCCTTACTGACCGTGAGAAGGCAAAGAAGCGCCAAGAACTTCTCAGCGGAAAGTTGCAATCCGACAAGGATGACCATGATACCAACAAGGAAAAGAAAAAAAAAGGGGATGATGTTTTGGATTTGTTTGACGAGAGATTGAACTGCTCCTTCTGCATGCAGTTACCAGAAAGGCCTGTCACCACCCCATGTGGCCACAATTTCTGCTTAAAATGTTTCCAGAAGTGGATTGGACAAGGAAAGAACACTTGTGCAAAGTGCCGCTGCGTGATTCCCTCCAAAATGGCTAGCCAGCCCCGTATTAACTCCACCCTTGTAGTGGCCATTCGTATGGCTAAATTGTCAAAATCATTTGCTTCTGGAGGACCTCAGAAGGTTTATCATTTTGTCCACAATCAAAATAGACCAGATAAAGCCTATACCACTGATCGGGCACAAAAAAAAGGAAAAGCTAATGCTGCAAGTGGAAAAATATTTGTTACAATTCCATCTGATCATTTTGGTCCTATTCCTGCCGAAAATGATCCTGAGAGAAACCAGGGTGTTCTGGTTGGTGAATGCTGGGAGGATAGGCTAGAATGTCGTCAATGGGGCGCTCACTTTCCACATGTTGCAGGTATAGCGGGACAGTCAAATATTGGTGCACAGTCGGTGGTTCTTTCTGGTGGCTACCAGGATGATGAAGATCATGGGGAGTGGTTTCTCTACACTGGAAGGTCTCTCTTTTCTTGTTCTCTTGCTGCTGCTTCTGTACTCCATGCAGTCTCTTCTGAAGAACTGATGAGTACAGTTGGCGGTCGAGACCTTAGTGGGAACAAGCGTACAAGCAAGGATCAATCTTTTGACCAGAAATTTGAAAAATCAAACAAAGCGCTACAAGTTAGCTGCGCGAAAGGTTATCCTGTTAGGGTTGTTAGAATATATCTTTTCGAAGACAGTTACAGAATCTGCTTTACAACGCCTTGGGTCTCTTGTTTATACATTTTCTATGAGAGTTTATCGCTCAAAATTCCAGAATGGGCGACGAACTACTTAGTTTTCTACTTCCATGGAACTGGAAAAGTTCATGATCTCACAAAGAAAAGCGTTCCTCATATGCTCCAGAGAAGGGATTGCGATGCGACAATGATCCTGCTCCATGGACAAGTTTTTAACTTCAGTGATGAACATGGAGATCGACCTAGACCCTTACCTGCAATTTCAGAGTTGAAAAAAGCCACAGATATTACGGAGAGGAAGGAAGGTCCATCATGGGACTTTGATGAGAAAGACGGTCAATGGAAGTGGAGGAAAGATCCACCAACGAGCAAGAGACCAGTTGAAGCTCTAGATTCTAATGGGAAGAGGTCAAGGATAAGAATTAGGCAATCACATATTATGAGTGTCCGAGAAAAGTTACTGAAAGAGTTTAGCTGCCTTATTTGCCGGGAGGTGATGAGTTTACCAATTACTACGCCTTGTGCCCATAACTTTTGCAAGTCATGCTTGGAAGGTGCTTTTGTAGGGAAGACATTCTTGAGAGAGAGAAGCACCGGTGGACGGGCTCTTAGATCCCAAAAGAATGTCTTGACTTGTCCTTGTTGCCCCACAGATATATCTGATTTTCTACAGAATCTTCAGGTAAATAGAGAGTTGTTGGATGTGATCGAGTCATTAAAAAGTAAGATTGAAGAAGGGGATGGAGCATCTGAGAAGCTGTGTGAAGAAGAAGAGGTAGATGGGGAAGAGGAGAATGAGGATGAAGATGAGGATGAAGGGAAGGGAAAAGATGGAAGCAATGCAAATGTAAGCAGCAGTCCTGTGGAAACGAGGAAGCGAGCAAAGGTGGATGATTTGGAATGA 2184 45.05 MMEEDAKEQPKATELQAKKTHVSQLPCDGDGICMLCKAKPSDLETITCKTCVTPWHVSCLSNPPETLASTLQWDCPDCSTPPEDVPLPSLGNHSLPTAPSSDLVAAIRAIEADASLTDREKAKKRQELLSGKLQSDKDDHDTNKEKKKKGDDVLDLFDERLNCSFCMQLPERPVTTPCGHNFCLKCFQKWIGQGKNTCAKCRCVIPSKMASQPRINSTLVVAIRMAKLSKSFASGGPQKVYHFVHNQNRPDKAYTTDRAQKKGKANAASGKIFVTIPSDHFGPIPAENDPERNQGVLVGECWEDRLECRQWGAHFPHVAGIAGQSNIGAQSVVLSGGYQDDEDHGEWFLYTGRSLFSCSLAAASVLHAVSSEELMSTVGGRDLSGNKRTSKDQSFDQKFEKSNKALQVSCAKGYPVRVVRIYLFEDSYRICFTTPWVSCLYIFYESLSLKIPEWATNYLVFYFHGTGKVHDLTKKSVPHMLQRRDCDATMILLHGQVFNFSDEHGDRPRPLPAISELKKATDITERKEGPSWDFDEKDGQWKWRKDPPTSKRPVEALDSNGKRSRIRIRQSHIMSVREKLLKEFSCLICREVMSLPITTPCAHNFCKSCLEGAFVGKTFLRERSTGGRALRSQKNVLTCPCCPTDISDFLQNLQVNRELLDVIESLKSKIEEGDGASEKLCEEEEVDGEEENEDEDEDEGKGKDGSNANVSSSPVETRKRAKVDDLE 727
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 840144 848507 - ClCG11G000670.2 Cla11g00064 283886

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00064 727 Pfam RING-type zinc-finger 586 640 IPR027370 -
Cla11g00064 727 MobiDBLite consensus disorder prediction 536 558 - -
Cla11g00064 727 ProSiteProfiles Zinc finger PHD-type profile. 30 81 IPR019787 -
Cla11g00064 727 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 376 421 - -
Cla11g00064 727 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 21 352 - -
Cla11g00064 727 ProSitePatterns Zinc finger PHD-type signature. 33 78 IPR019786 -
Cla11g00064 727 SUPERFAMILY FYVE/PHD zinc finger 25 85 IPR011011 -
Cla11g00064 727 CDD RING-HC 163 201 - -
Cla11g00064 727 ProSiteProfiles YDG domain profile. 291 467 IPR003105 -
Cla11g00064 727 Pfam Zinc finger, C3HC4 type (RING finger) 163 201 IPR018957 GO:0046872
Cla11g00064 727 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 565 689 IPR013083 -
Cla11g00064 727 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 83 IPR013083 -
Cla11g00064 727 MobiDBLite consensus disorder prediction 120 149 - -
Cla11g00064 727 SUPERFAMILY RING/U-box 154 209 - -
Cla11g00064 727 SMART G9a_1 286 430 IPR003105 -
Cla11g00064 727 MobiDBLite consensus disorder prediction 672 727 - -
Cla11g00064 727 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 229 IPR013083 -
Cla11g00064 727 ProSiteProfiles Zinc finger RING-type profile. 586 642 IPR001841 -
Cla11g00064 727 Pfam SAD/SRA domain 294 420 IPR003105 -
Cla11g00064 727 MobiDBLite consensus disorder prediction 1 20 - -
Cla11g00064 727 MobiDBLite consensus disorder prediction 1 15 - -
Cla11g00064 727 SMART PHD_3 32 79 IPR001965 -
Cla11g00064 727 SUPERFAMILY PUA domain-like 265 424 IPR015947 -
Cla11g00064 727 Gene3D - 262 433 IPR036987 -
Cla11g00064 727 SUPERFAMILY RING/U-box 579 667 - -
Cla11g00064 727 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 501 697 - -
Cla11g00064 727 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 21 352 IPR045134 -
Cla11g00064 727 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 501 697 IPR045134 -
Cla11g00064 727 ProSitePatterns Zinc finger RING-type signature. 601 610 IPR017907 -
Cla11g00064 727 SMART ring_2 163 201 IPR001841 -
Cla11g00064 727 SMART ring_2 586 642 IPR001841 -
Cla11g00064 727 ProSiteProfiles Zinc finger RING-type profile. 163 202 IPR001841 -
Cla11g00064 727 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 376 421 IPR045134 -
Cla11g00064 727 MobiDBLite consensus disorder prediction 677 700 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00064 K10638 UHRF1, NP95; E3 ubiquitin-protein ligase UHRF1 [EC:2.3.2.27] - csv:101219001 1094.34
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00257 Cla-Chr4:8126140 Cla11g00064 Cla-Chr11:840144 3.50E-72 dispersed
Cla11g00064 Cla-Chr11:840144 Cla06g01573 Cla-Chr6:29289936 3.65E-06 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cla10g02111 . 17 738 C2H2 Transcription Factor Family AT5G01310 59.8 4.2e-241 831.2
Cla04g00085 CCT,ECH 28 356 C2H2 Transcription Factor Family AT3G57670 62.4 5.2e-113 404.8
Cla10g01643 . 65 350 C2H2 Transcription Factor Family AT3G57670 66.2 3.2e-102 369.0
Cla02g02261 . 188 363 C2H2 Transcription Factor Family AT3G57670 90.3 6.0e-101 364.8
Cla09g00386 . 123 286 C2H2 Transcription Factor Family AT3G57670 86.0 1.1e-91 334.0
Cla03g00953 . 86 247 C2H2 Transcription Factor Family AT3G57670 80.2 3.5e-85 312.4
Cla01g01224 . 164 318 C2H2 Transcription Factor Family AT3G57670 83.2 6.0e-85 311.6
Cla01g01224 . 25 330 C2H2 Transcription Factor Family AT1G08290 53.1 9.3e-90 327.4
Cla03g00953 . 91 256 C2H2 Transcription Factor Family AT1G08290 75.3 3.2e-82 302.4
Cla02g02261 . 192 357 C2H2 Transcription Factor Family AT1G08290 75.7 1.3e-80 297.0
Cla04g00085 CCT,ECH 178 350 C2H2 Transcription Factor Family AT1G08290 70.1 2.5e-79 292.7
Cla09g00386 . 110 286 C2H2 Transcription Factor Family AT1G08290 70.7 5.7e-79 291.6
Cla10g01643 . 155 309 C2H2 Transcription Factor Family AT1G08290 75.6 8.2e-78 287.7
Cla04g00085 CCT,ECH 55 353 C2H2 Transcription Factor Family AT3G20880 55.3 2.0e-94 343.2
Cla02g02261 . 187 363 C2H2 Transcription Factor Family AT3G20880 79.7 7.1e-92 334.7
Cla10g01643 . 156 307 C2H2 Transcription Factor Family AT3G20880 88.2 5.1e-90 328.6
Cla01g01224 . 126 327 C2H2 Transcription Factor Family AT3G20880 64.4 2.1e-88 323.2
Cla09g00386 . 126 283 C2H2 Transcription Factor Family AT3G20880 84.3 9.0e-87 317.8
Cla03g00953 . 90 244 C2H2 Transcription Factor Family AT3G20880 83.2 8.4e-85 311.2
Cla04g00085 CCT,ECH 80 353 C2H2 Transcription Factor Family AT1G51220 63.5 3.5e-97 352.1
Cla02g02261 . 188 363 C2H2 Transcription Factor Family AT1G51220 81.8 9.9e-92 334.0
Cla10g01643 . 151 307 C2H2 Transcription Factor Family AT1G51220 88.6 1.7e-91 333.2
Cla01g01224 . 126 338 C2H2 Transcription Factor Family AT1G51220 63.1 8.7e-88 320.9
Cla09g00386 . 126 284 C2H2 Transcription Factor Family AT1G51220 83.6 5.6e-87 318.2
Cla03g00953 . 90 244 C2H2 Transcription Factor Family AT1G51220 81.9 1.5e-84 310.1
Cla03g00953 . 25 247 C2H2 Transcription Factor Family AT1G13290 68.0 7.5e-91 330.9
Cla04g00085 CCT,ECH 120 332 C2H2 Transcription Factor Family AT1G13290 67.9 5.8e-83 304.7
Cla10g01643 . 153 312 C2H2 Transcription Factor Family AT1G13290 80.9 8.4e-82 300.8
Cla01g01224 . 126 319 C2H2 Transcription Factor Family AT1G13290 68.9 5.4e-81 298.1
Cla02g02261 . 190 348 C2H2 Transcription Factor Family AT1G13290 80.7 1.2e-80 297.0
Cla09g00386 . 71 278 C2H2 Transcription Factor Family AT1G13290 61.0 1.9e-78 289.7
Cla07g01626 . 1 613 C2H2 Transcription Factor Family AT5G51230 63.8 3.0e-227 785.0
Cla10g00225 . 202 557 C2H2 Transcription Factor Family AT5G51230 57.7 4.1e-107 386.0
Cla05g01792 . 1 394 C2H2 Transcription Factor Family AT2G24500 59.2 1.6e-125 446.4
Cla01g00664 . 29 387 C2H2 Transcription Factor Family AT1G25250 50.4 1.9e-91 333.2
Cla04g01024 . 27 211 C2H2 Transcription Factor Family AT1G25250 78.1 1.4e-86 317.0
Cla04g01243 . 37 438 C2H2 Transcription Factor Family AT1G25250 54.7 1.8e-84 310.1
Cla03g01633 . 591 809 C2H2 Transcription Factor Family AT1G25250 53.1 2.5e-62 236.5
Cla08g01505 . 1 186 C2H2 Transcription Factor Family AT1G25250 58.2 6.1e-61 231.9
Cla01g01891 CCT,ECH 9 196 C2H2 Transcription Factor Family AT1G25250 56.0 5.1e-60 228.8
Cla09g00573 . 29 221 C2H2 Transcription Factor Family AT1G25250 57.0 4.4e-59 225.7
Cla04g00874 CCT,ECH 54 208 C2H2 Transcription Factor Family AT1G25250 64.3 5.7e-59 225.3
Cla03g00219 . 24 188 C2H2 Transcription Factor Family AT1G25250 57.7 1.3e-58 224.2
Cla09g00685 . 49 202 C2H2 Transcription Factor Family AT1G25250 64.3 1.3e-58 224.2
Cla07g00857 CCT,ECH 32 185 C2H2 Transcription Factor Family AT1G25250 64.3 6.3e-58 221.9
Cla07g01308 . 57 209 C2H2 Transcription Factor Family AT1G25250 64.5 1.1e-57 221.1
Cla10g01937 CCT,ECH 42 193 C2H2 Transcription Factor Family AT1G25250 63.0 1.4e-57 220.7
Cla05g01835 . 68 280 C2H2 Transcription Factor Family AT1G25250 50.7 7.0e-57 218.4
Cla02g00228 . 18 188 C2H2 Transcription Factor Family AT1G25250 57.6 6.5e-55 211.8
Cla02g01009 . 15 189 C2H2 Transcription Factor Family AT1G25250 57.0 8.5e-55 211.5
Cla09g00066 . 75 219 C2H2 Transcription Factor Family AT1G25250 63.3 4.2e-54 209.1
Cla11g00071 . 73 223 C2H2 Transcription Factor Family AT1G25250 58.0 2.7e-53 206.5
Cla02g01773 . 39 309 C2H2 Transcription Factor Family AT2G32930 55.3 2.6e-36 150.2
Cla09g01851 . 4 342 C2H2 Transcription Factor Family AT3G27970 66.4 7.2e-141 497.3
Cla09g01850 . 35 358 C2H2 Transcription Factor Family AT3G27970 59.5 1.7e-118 422.9
Cla10g02111 . 17 738 C2H2 Transcription Factor Family AT5G01310 59.8 4.2e-241 831.2
Cla02g00353 . 61 284 C2H2 Transcription Factor Family AT4G35280 51.5 7.2e-59 224.6
Cla01g01365 . 38 357 C2H2 Transcription Factor Family AT5G22890 50.6 3.2e-83 305.8
Cla08g01505 . 79 186 C2H2 Transcription Factor Family AT1G68130 68.2 6.0e-41 165.2
Cla09g00573 . 114 223 C2H2 Transcription Factor Family AT1G68130 66.1 7.4e-39 158.3
Cla03g01633 . 654 762 C2H2 Transcription Factor Family AT1G68130 61.8 2.2e-38 156.8
Cla04g00874 CCT,ECH 100 208 C2H2 Transcription Factor Family AT1G68130 62.7 2.8e-38 156.4
Cla05g01835 . 111 227 C2H2 Transcription Factor Family AT1G68130 61.3 3.7e-38 156.0
Cla07g01308 . 101 209 C2H2 Transcription Factor Family AT1G68130 62.7 3.7e-38 156.0
Cla10g01937 CCT,ECH 85 193 C2H2 Transcription Factor Family AT1G68130 60.9 8.2e-38 154.8
Cla01g01891 CCT,ECH 73 180 C2H2 Transcription Factor Family AT1G68130 63.6 8.2e-38 154.8
Cla02g01009 . 82 189 C2H2 Transcription Factor Family AT1G68130 63.6 2.4e-37 153.3
Cla03g00219 . 81 188 C2H2 Transcription Factor Family AT1G68130 62.7 2.4e-37 153.3
Cla09g00685 . 95 202 C2H2 Transcription Factor Family AT1G68130 61.8 3.1e-37 152.9
Cla07g00857 CCT,ECH 78 185 C2H2 Transcription Factor Family AT1G68130 63.6 4.1e-37 152.5
Cla02g00228 . 79 190 C2H2 Transcription Factor Family AT1G68130 61.1 6.9e-37 151.8
Cla09g00066 . 111 219 C2H2 Transcription Factor Family AT1G68130 60.0 1.5e-36 150.6
Cla04g01243 . 37 438 C2H2 Transcription Factor Family AT2G01940 53.9 1.4e-88 323.9
Cla04g01024 . 31 217 C2H2 Transcription Factor Family AT2G01940 77.4 9.4e-82 301.2
Cla08g01505 . 40 188 C2H2 Transcription Factor Family AT2G01940 66.4 1.6e-57 220.7
Cla03g01633 . 615 764 C2H2 Transcription Factor Family AT2G01940 65.1 3.6e-57 219.5
Cla04g00874 CCT,ECH 61 210 C2H2 Transcription Factor Family AT2G01940 65.1 2.3e-56 216.9
Cla10g01937 CCT,ECH 46 195 C2H2 Transcription Factor Family AT2G01940 63.8 2.3e-56 216.9
Cla09g00573 . 75 223 C2H2 Transcription Factor Family AT2G01940 67.1 3.1e-56 216.5
Cla09g00685 . 56 204 C2H2 Transcription Factor Family AT2G01940 65.1 5.2e-56 215.7
Cla01g01891 CCT,ECH 34 182 C2H2 Transcription Factor Family AT2G01940 63.8 9.8e-55 211.5
Cla07g01308 . 62 211 C2H2 Transcription Factor Family AT2G01940 62.5 9.8e-55 211.5
Cla07g00857 CCT,ECH 39 187 C2H2 Transcription Factor Family AT2G01940 64.5 1.7e-54 210.7
Cla05g01835 . 72 220 C2H2 Transcription Factor Family AT2G01940 64.5 2.2e-54 210.3
Cla03g00219 . 42 190 C2H2 Transcription Factor Family AT2G01940 62.5 2.9e-54 209.9
Cla09g00066 . 75 221 C2H2 Transcription Factor Family AT2G01940 61.7 7.1e-53 205.3
Cla11g00071 . 73 225 C2H2 Transcription Factor Family AT2G01940 59.7 2.7e-52 203.4
Cla02g01009 . 47 191 C2H2 Transcription Factor Family AT2G01940 63.5 3.5e-52 203.0
Cla02g00228 . 44 190 C2H2 Transcription Factor Family AT2G01940 63.1 1.0e-51 201.4
Cla11g00683 . 25 270 C2H2 Transcription Factor Family AT5G14140 64.6 5.6e-90 327.8
Cla09g00434 . 1 830 C2H2 Transcription Factor Family AT3G62240 52.2 9.0e-232 800.4
Cla01g02493 . 1 359 C2H2 Transcription Factor Family AT1G30970 60.5 4.4e-107 385.2
Cla10g01837 . 66 255 C2H2 Transcription Factor Family AT4G04885 53.9 1.0e-49 195.7
Cla03g00859 . 49 480 C2H2 Transcription Factor Family AT5G64610 83.3 5.3e-210 727.2
Cla03g00859 . 49 480 C2H2 Transcription Factor Family AT5G09740 66.4 1.9e-152 535.8
Cla01g00631 . 1 381 C2H2 Transcription Factor Family AT2G01650 54.4 1.1e-110 397.1
Cla05g01874 . 35 431 C2H2 Transcription Factor Family AT1G75710 64.6 6.0e-132 468.0
Cla02g01920 . 52 371 C2H2 Transcription Factor Family AT2G29660 59.5 1.2e-98 357.1
Cla10g00594 . 1 406 C2H2 Transcription Factor Family AT4G27240 63.5 3.2e-135 478.8
Cla05g01547 . 1 430 C2H2 Transcription Factor Family AT4G27240 56.6 1.3e-120 430.3
Cla03g00889 . 189 393 C2H2 Transcription Factor Family AT4G27240 51.2 2.2e-51 200.3
Cla10g00594 . 1 435 C2H2 Transcription Factor Family AT5G54630 67.2 8.3e-161 563.9
Cla05g01547 . 1 459 C2H2 Transcription Factor Family AT5G54630 59.7 5.4e-144 508.1
Cla06g01614 . 53 1591 C2H2 Transcription Factor Family AT3G47890 57.0 0.0e+00 1591.2
Cla06g01614 . 1 1591 C2H2 Transcription Factor Family AT3G47910 55.9 0.0e+00 1628.6
Cla10g00294 . 190 539 C2H2 Transcription Factor Family AT4G12240 58.7 5.9e-114 407.9
Cla05g02062 . 48 414 C2H2 Transcription Factor Family AT5G52010 66.6 5.0e-135 478.0
Cla10g01846 . 1 312 C2H2 Transcription Factor Family AT5G03740 51.1 7.0e-41 164.9
Cla03g01025 . 1 105 C2H2 Transcription Factor Family AT3G02790 80.0 1.9e-44 175.3
Cla03g01025 . 1 105 C2H2 Transcription Factor Family AT5G16470 76.4 9.4e-41 162.9
Cla04g00339 . 1 252 C2H2 Transcription Factor Family AT3G57480 57.8 4.0e-82 301.6
Cla04g00339 . 1 248 C2H2 Transcription Factor Family AT2G41835 64.8 2.7e-90 328.9
Cla06g01722 . 758 1002 C2H2 Transcription Factor Family AT5G63280 59.5 1.8e-91 332.8
Cla05g01378 . 369 551 C2H2 Transcription Factor Family AT5G63280 57.8 9.9e-58 220.7
Cla05g02699 . 53 626 C2H2 Transcription Factor Family AT3G12270 54.6 6.2e-169 591.3
Cla08g00513 . 11 322 C2H2 Transcription Factor Family AT1G01350 72.8 3.4e-132 468.4
Cla01g00699 . 14 184 C2H2 Transcription Factor Family AT5G61190 77.8 6.2e-76 283.1
Cla03g01708 . 23 335 C2H2 Transcription Factor Family AT5G26610 54.1 1.5e-62 236.9
Cla05g00225 . 18 543 C2H2 Transcription Factor Family AT1G01930 51.7 4.2e-138 488.8
Cla08g00283 . 46 359 C2H2 Transcription Factor Family AT1G43860 57.2 2.5e-103 372.5
Cla09g01009 . 196 399 C2H2 Transcription Factor Family AT1G50670 70.1 2.3e-78 288.9
Cla01g01340 . 1 394 C2H2 Transcription Factor Family AT1G55460 71.4 9.1e-164 573.5
Cla05g01408 . 1 392 C2H2 Transcription Factor Family AT1G55460 71.2 1.9e-161 565.8
Cla02g01490 . 4 148 C2H2 Transcription Factor Family AT3G05760 79.3 7.1e-61 230.3
Cla10g01888 . 60 311 C2H2 Transcription Factor Family AT2G32600 67.7 1.5e-85 313.2
Cla05g00963 . 1 500 C2H2 Transcription Factor Family AT5G06160 71.8 4.5e-205 711.1
Cla01g01243 . 19 454 C2H2 Transcription Factor Family AT2G27760 59.9 1.4e-149 526.6
Cla04g00924 . 3 118 C2H2 Transcription Factor Family AT2G36930 75.0 4.4e-47 184.9
Cla06g00766 . 91 411 C2H2 Transcription Factor Family AT1G04850 72.8 4.9e-104 374.8
Cla05g01792 . 1 394 C2H2 Transcription Factor Family AT4G31420 58.0 6.1e-128 454.5
Cla10g01937 CCT,ECH 63 211 C2H2 Transcription Factor Family AT2G02080 79.9 3.9e-72 269.2
Cla01g01891 CCT,ECH 51 190 C2H2 Transcription Factor Family AT2G02080 81.4 3.9e-72 269.2
Cla02g01009 . 60 198 C2H2 Transcription Factor Family AT2G02080 84.2 8.7e-72 268.1
Cla09g00066 . 89 229 C2H2 Transcription Factor Family AT2G02080 84.4 1.9e-71 266.9
Cla07g01308 . 79 218 C2H2 Transcription Factor Family AT2G02080 84.3 3.3e-71 266.2
Cla03g00219 . 59 197 C2H2 Transcription Factor Family AT2G02080 82.0 7.4e-71 265.0
Cla07g00857 CCT,ECH 56 193 C2H2 Transcription Factor Family AT2G02080 81.2 8.2e-70 261.5
Cla05g01835 . 89 225 C2H2 Transcription Factor Family AT2G02080 83.2 1.1e-69 261.2
Cla03g01633 . 632 768 C2H2 Transcription Factor Family AT2G02080 84.7 4.1e-69 259.2
Cla02g00228 . 57 197 C2H2 Transcription Factor Family AT2G02080 80.9 4.5e-68 255.8
Cla08g01505 . 57 207 C2H2 Transcription Factor Family AT2G02080 71.0 2.2e-67 253.4
Cla04g01243 . 56 210 C2H2 Transcription Factor Family AT2G02080 55.5 3.0e-48 189.9
Cla01g00664 . 55 188 C2H2 Transcription Factor Family AT2G02080 58.2 1.7e-46 184.1
Cla04g01024 . 52 215 C2H2 Transcription Factor Family AT2G02080 51.2 6.3e-46 182.2
Cla05g02675 . 287 516 C2H2 Transcription Factor Family AT3G07940 62.6 4.4e-74 275.0
Cla01g00758 . 1 290 C2H2 Transcription Factor Family AT3G07940 53.8 9.2e-72 267.3
Cla01g02455 CCT 1 341 C2H2 Transcription Factor Family AT4G05330 71.2 2.3e-141 498.8
Cla03g00588 CCT 850 1171 C2H2 Transcription Factor Family AT4G05330 65.2 4.4e-124 441.4
Cla01g02455 CCT 8 341 C2H2 Transcription Factor Family AT4G21160 73.7 1.6e-142 502.7
Cla03g00588 CCT 850 1171 C2H2 Transcription Factor Family AT4G21160 66.8 3.3e-127 451.8
Cla08g00655 . 56 989 C2H2 Transcription Factor Family AT1G43850 55.8 3.3e-203 705.7
Cla01g00550 CCT,ECH 371 657 C2H2 Transcription Factor Family AT1G43850 57.5 2.3e-92 337.4
Cla05g00855 CCT,ECH 276 577 C2H2 Transcription Factor Family AT1G43850 54.6 1.2e-88 325.1
Cla02g02157 . 62 222 C2H2 Transcription Factor Family AT3G52800 53.8 4.3e-43 171.4
Cla06g01722 . 748 928 C2H2 Transcription Factor Family AT5G40710 58.7 3.1e-63 238.8
Cla05g01378 . 395 551 C2H2 Transcription Factor Family AT5G40710 61.1 8.7e-58 220.7
Cla01g00614 . 38 165 C2H2 Transcription Factor Family AT1G70790 59.2 1.7e-40 162.5
Cla05g01194 . 38 165 C2H2 Transcription Factor Family AT1G70790 59.2 1.9e-39 159.1
Cla06g01419 . 71 198 C2H2 Transcription Factor Family AT1G70790 60.8 2.5e-39 158.7
Cla07g00578 . 40 167 C2H2 Transcription Factor Family AT1G70790 56.2 1.1e-37 153.3
Cla07g01154 . 44 198 C2H2 Transcription Factor Family AT5G10970 56.6 7.9e-39 157.9
Cla05g00632 . 11 412 C2H2 Transcription Factor Family AT5G18550 59.2 2.8e-57 219.9
Cla11g00064 . 23 676 C2H2 Transcription Factor Family AT5G39550 52.7 2.2e-182 636.0
Cla09g01851 . 4 342 C2H2 Transcription Factor Family AT5G40310 65.5 4.4e-138 488.0
Cla09g01850 . 35 358 C2H2 Transcription Factor Family AT5G40310 58.3 6.6e-118 421.0
Cla09g02010 . 13 340 C2H2 Transcription Factor Family AT5G20220 56.4 1.1e-95 347.4
Cla03g01037 . 34 319 C2H2 Transcription Factor Family AT5G16540 52.2 2.6e-58 222.6
Cla09g00973 . 394 675 C2H2 Transcription Factor Family AT1G34370 70.9 1.4e-115 412.9
Cla01g01830 . 134 333 C2H2 Transcription Factor Family AT1G34370 57.1 8.9e-65 244.2
Cla01g01365 . 189 354 C2H2 Transcription Factor Family AT1G34370 61.4 5.0e-60 228.4
Cla06g01457 . 43 1296 C2H2 Transcription Factor Family AT3G18290 67.2 0.0e+00 1667.1
Cla01g00928 . 7 489 C2H2 Transcription Factor Family AT5G22480 75.2 4.7e-207 717.6
Cla11g01678 . 1 349 C2H2 Transcription Factor Family AT3G14740 53.6 2.2e-102 369.4
Cla07g01625 . 30 192 C2H2 Transcription Factor Family AT5G07500 64.4 4.4e-57 218.4
Cla07g00403 . 191 337 C2H2 Transcription Factor Family AT5G07500 55.1 2.9e-48 189.1
Cla10g01174 . 239 359 C2H2 Transcription Factor Family AT5G07500 62.8 2.4e-47 186.0
Cla10g01629 . 264 384 C2H2 Transcription Factor Family AT5G07500 62.0 1.6e-46 183.3
Cla02g01906 . 213 333 C2H2 Transcription Factor Family AT5G07500 62.8 1.6e-46 183.3
Cla11g00173 . 80 201 C2H2 Transcription Factor Family AT5G07500 64.8 2.7e-46 182.6
Cla07g00238 . 88 194 C2H2 Transcription Factor Family AT5G07500 69.2 1.3e-45 180.3
Cla03g01526 . 90 196 C2H2 Transcription Factor Family AT5G07500 67.3 1.1e-44 177.2
Cla05g01812 . 54 178 C2H2 Transcription Factor Family AT5G07500 59.1 5.6e-44 174.9
Cla08g01651 . 30 172 C2H2 Transcription Factor Family AT5G07500 53.5 2.1e-43 172.9
Cla10g01629 . 53 745 C2H2 Transcription Factor Family AT5G12850 51.7 2.5e-185 646.0
Cla10g01174 . 1 722 C2H2 Transcription Factor Family AT5G12850 50.8 4.2e-185 645.2
Cla03g01526 . 84 211 C2H2 Transcription Factor Family AT5G12850 63.3 4.0e-50 196.8
Cla11g00173 . 79 216 C2H2 Transcription Factor Family AT5G12850 57.1 1.3e-48 191.8
Cla07g00238 . 88 198 C2H2 Transcription Factor Family AT5G12850 67.6 8.3e-48 189.1
Cla08g01651 . 56 217 C2H2 Transcription Factor Family AT5G12850 54.5 4.1e-47 186.8
Cla07g01625 . 37 147 C2H2 Transcription Factor Family AT5G12850 65.8 2.9e-45 180.6
Cla10g01387 . 3 192 C2H2 Transcription Factor Family AT3G28210 58.4 2.0e-62 235.7
Cla03g01360 . 51 755 C2H2 Transcription Factor Family AT2G27100 63.6 7.3e-225 777.3
Cla07g00839 CCT,ECH 83 222 C2H2 Transcription Factor Family AT5G66350 54.0 1.3e-43 174.1
Cla07g00839 CCT,ECH 80 222 C2H2 Transcription Factor Family AT1G75520 50.8 1.0e-38 157.9
Cla08g01447 CCT,ECH 31 344 C2H2 Transcription Factor Family AT1G19790 51.2 1.9e-53 206.8
Cla01g01952 CCT,ECH 171 435 C2H2 Transcription Factor Family AT3G51060 51.6 5.5e-59 225.3
Cla05g01902 CCT,ECH 42 246 C2H2 Transcription Factor Family AT3G51060 50.2 6.7e-49 191.8
Cla07g00839 CCT,ECH 99 219 C2H2 Transcription Factor Family AT3G51060 59.7 7.9e-42 168.3
Cla08g01447 CCT,ECH 108 277 C2H2 Transcription Factor Family AT4G36260 58.4 6.1e-38 155.2
Cla07g00839 CCT,ECH 100 220 C2H2 Transcription Factor Family AT4G36260 52.6 5.1e-37 152.1
Cla04g00085 CCT,ECH 165 335 C2H2 Transcription Factor Family AT1G34790 75.6 1.7e-82 303.1
Cla02g02261 . 193 364 C2H2 Transcription Factor Family AT1G34790 76.7 2.9e-82 302.4
Cla10g01643 . 149 309 C2H2 Transcription Factor Family AT1G34790 77.6 3.2e-81 298.9
Cla01g01224 . 130 320 C2H2 Transcription Factor Family AT1G34790 65.8 6.0e-80 294.7
Cla03g00953 . 86 251 C2H2 Transcription Factor Family AT1G34790 74.7 1.7e-79 293.1
Cla09g00386 . 120 286 C2H2 Transcription Factor Family AT1G34790 75.4 6.6e-79 291.2
Cla05g02101 . 1 224 C2H2 Transcription Factor Family AT1G27730 53.1 3.3e-46 182.2
Cla03g01037 . 34 402 C2H2 Transcription Factor Family AT3G02830 53.4 3.0e-73 272.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002789 2 4 2 2 2 2 2 2 2 2 2 2 2 1 1 2 2 2 2 2 2 1 1 1 1 2 1 2 3 1 55
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla11g00064 Cla_Chr11 FPKM 33.459545 34.923889 208.932907 204.578476 1186.794678 1203.359253 1211.550415 119.390678 131.70639 122.85376