Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00086 ATGGCAATGACTCGAGTAATTCTCATTGCTACGTTGTCATTGTTGCTTTTCGGTATAGTTTGTGATGCTCAACTTTCTTCTACATTTTACGATCAAACTTGTCCTACTGCACTCAATACTATTAGAACTGTTGTTAGGCAAGCAGTTTCTCAAGAGCGTCGAATGGCTGCATCTCTCATTCGCCTCCATTTTCATGATTGCTTTGTTCAAGGTTGTGATGCATCGATATTGCTTGATGATACTCATTCCATGATTGGTGAACAAAATGCAGCTCCAAACAGAAACTCTGCAAGAGGTTATGGAGTGATACACAAGGCTAAGACGGAAGTTGAGAAGATATGTCCTGGTGTTGTATCTTGTGCAGATATTCTTACTGTGGCTGCAAGAGATGCATCTTTTGCTGTCGGAGGTCCATCTTGGACAGTGAAACTTGGAAGACGAGATTCTACCACCGCAAGTAAAACTCTAGCAGAAAGTGAGCTACCAGGCTTCCAAGAAAGCCTCGACAAACTTATATCCATTTTTGAGAACAAAGGTCTTAGTGCTAGAGACATGGTTGCACTTTCAGGTTCTCACACCATAGGACAAGCCCAATGCTTTCTTTTCCGCAATAGGATATACAACCAAAGTAATATTGACACAGGATTTGCTAGTACTCGTCGTAGAAATTGTCCTACAACTGGTGGTAATGGAAATTTGGCACCACTTGATTTGGTTACACCTAACTCCTTTGACAATAACTACTTCAAAAATCTTGTGCAAAAGAAGGGATTGCTTGAAACAGATCAAGTTCTCTTTAATGGAGGATCAACAGATAGTATTGTCACAGAGTATAGTAGGAATCCCACGACATTCAAATCAGATTTTGCAACTGCAATGATAAAAATGGGAGACATTCAACCTCTCATTGGAGTAGAAGGACAAATAAGAAAGATATGTGGTGCAGTGAACTAA 954 40.15 MAMTRVILIATLSLLLFGIVCDAQLSSTFYDQTCPTALNTIRTVVRQAVSQERRMAASLIRLHFHDCFVQGCDASILLDDTHSMIGEQNAAPNRNSARGYGVIHKAKTEVEKICPGVVSCADILTVAARDASFAVGGPSWTVKLGRRDSTTASKTLAESELPGFQESLDKLISIFENKGLSARDMVALSGSHTIGQAQCFLFRNRIYNQSNIDTGFASTRRRNCPTTGGNGNLAPLDLVTPNSFDNNYFKNLVQKKGLLETDQVLFNGGSTDSIVTEYSRNPTTFKSDFATAMIKMGDIQPLIGVEGQIRKICGAVN 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1117328 1118473 - ClCG11G000870.1 Cla11g00086 283908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00086 317 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 Pfam Peroxidase 42 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 PANTHER PEROXIDASE 10 316 - -
Cla11g00086 317 ProSiteProfiles Plant heme peroxidase family profile. 24 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cla11g00086 317 CDD secretory_peroxidase 24 316 IPR033905 GO:0004601|GO:0042744
Cla11g00086 317 Gene3D Peroxidase, domain 2 162 296 - -
Cla11g00086 317 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Cla11g00086 317 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 Gene3D - 28 313 - -
Cla11g00086 317 PANTHER PEROXIDASE 72-RELATED 10 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00086 317 SUPERFAMILY Heme-dependent peroxidases 24 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla11g00086 Cla-Chr11:1117328 Cla11g00557 Cla-Chr11:6305572 2.25E-137 dispersed
Cla11g00085 Cla-Chr11:1110701 Cla11g00086 Cla-Chr11:1117328 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00086 K00430 - csv:116403992 550.436