Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00087 | ATGGGTCTCTTCTTCTTCCTCTCTACAATGCCCATTTCAAGGCTTTGCCTATTTCTCGCCTTCTTTCCGCTGTTTCTTTCACCCCTTTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGATGACCGGAGCTTCCTCCTCCTCCGCCACCACCGCCACCTCCTCCACCAACCCTTTTTCCCATGGACTTCCTTACCTCCATCTCAAGCTCCATCTTCTCTTTCTCCCTTGCCTCAACCACAGCACCAACAGCCTAAACTCCCCTTTTCTTCTACTTCATTTTCCTCGCCCCCTAAACCCTTTTTTCCATCCTACCCTTCGTCGCCGCCGCCGCCTCCGTCCCCTCCTTTGACGGCGCTCCCTACATTTCCGGCCAACATTTCTGCTCTTCTCTTTCCGCAACCTACTTCTTCTTCCCAACACCTCCACCGCCATGTCTTTGCCATTGTCATCTCTGTTTCTCTTGTCTTCTCTGTTCTTGTTTTTCTCGTTGCTCTGTACTTATACTTTCGAAAGCGGAACCGACAAATCTCTGCTACCGATAAGGCCTCGAGAACTGATAATCTCCGGCTGTATCCGCCGGATATTGACACTTCTGATGGAGTTCACAAACACAGAACCTCCTCCACCACCAGCTCCAAATTTCTTTATCTTGGGACTTTGGCTACTTCTCGAGAGATTGATGAGGAGGCCGCCGGAAATGTGGAGGACGGTGGCGGCGGGATCGTGGAGTCTGTTTCTCCGGTGAAAATGGGGTCGCCGGAGCTGAAGCCCCTTCCACCGCTTCCTCGCCGGAATTTCGCCGAAGATTATCAGAGGAATGTTGATAGTAATGACAACGATGATGACGAAGAAGATCGCGACGATGAAGAGTTCTTTTCGCCAAGAGGGTCTTCTGTCGGCGGGAAGGATAATGTGGGGAGTAATAGAAGATTGAGCCCTGTGAAGTTGTTTCATAATGTGGAAACTGAAAATTTCTTGAGGAAAAGCTATAATTCTAGTTTGAATTCTGGTTCTCCCTCTGTTTCTGTTCCCAATAGTCCTTCTCCGCCATTGATGTTGAGCCCCACGAGTTTGAGATCGAAGTCGCCTGACTCCATTATCAGATTCCCTGTTCCTTTACGGCCACTGCCAACACTTCCGGTACCGCCATCACCGTCGTTGTCCTCTGCTTCTTCACCAATGGGAGGTTCAGGGAACACCAAGAACTCGCCGTCGAGAGATTCCGATTTGTCAGAGCTGCATCGGCAGTGTTCAAATGGTTTTAGGATGGATTACCAGCAACCATTACCGGTAAAACTACCACCACCCCGGCCACCACCACCGCCACCACCTCCTCCAATGTTTTGGGAGATTCCTCAATCTTCCTCTCTTCTCAACAAGGAACCAAATCTAGGTCCACCGGTACTCACCGTGCCATCGAGACCGATACTCTCACAGAACATAGCTCATATGTCAGCAGGGGAGCAATCAAACACCATTGGAGATGCCGAGAGAATGGAAGAAAATTCGAAGCCGAAACTGAAGGCCTTGCATTGGGACAAAGTTCGGACGAGCTCCGATCGAGCCATGGTGTGGGATCAGATCAAGTCGAGTTCTTTTCAGTTGAATGAGGAAATGATTGAATCACTTTTTATGGTGAATAACAATAATTCAAGTCTGATGAGCAAGGAAAATGGTAGTGTTCGTCAAAACATGCCTTTAGGGAGCCAAGAGAATCGAGTTCTTGATCCTAAGAAGTCTCAGAATATTGCAATTTTGTTGAGGGCACTTAATGTTACCATTGAAGAAGTCTCAGAGGCCCTTTTGGAAGGAAATTCAGATACTTTGTGCACTGAACTGCTAGAAAGTTTACTAAAAATGGCGCCGACCGAAGAAGAAGAACGTAATTTGAAAGAATACAAAGATGATTCACCTTTTAAACTTGGGCCAGCTGAGAAATTCCTCAAGGTAGTTCTCGATGTACCATTTGCATTCAAAAGGGTGGATGCAATGCTTTACATTGCTAATTTCGAATCTGAGGTTGAGTACCTCAATCGGTCCTTCGAAACTCTTGAGGCTGCTTGTATAGAATTGAAGAACAGCAGAATGTTTCTCAAACTTCTTGAAGCAGTGCTCAAAACCGGGAACCGGATGAATGTAGGCACGAACCGAGGCGATGCACATGCTTTTAAACTCGACACCCTTCTGAAGCTTGTCGATATCAAGGGCACTGATGGAAAGACCACTCTCTTGCATTTCGTAGTGCAGGAGATTATTAGAGCTGAAGGTTATCGACACTCCACCTCTGACCTCAACCTGACAGCTGATAAAACTCAACAATCTTCCTTAACAAATGACGTCGAGTTTCGGAAGCTTGGTCTTCAAGTTGTTTCAGGTCTTAGTAGGGAGCTATCCAATGTGAAGAAAGCTGCATTAATGGATGCAGATGTGCTTAGCAACGATGTAGGGAAACTCGCTGGAGGGATCACAAAAATCACTGAGGTCATTAGATTAAATGAAGACATGTCGAAAGGAGGGAGTAAGTCAAATTTCTCGGACTCCATGAACAGGTTCTTGGGGAGGGCAGCTGAAGAAGTAGCAAGGGTACAAGTCAAAGAGGGCATTATCCTCTCCATGGTAAAGGAAATAACCGAATACTTTCATGGAAACTTAGCGAAAGAAGAAGCTCGGCCGCTGCGTATATTCATGGTGGTATGCAAAGAAGTTGGAAGAATCAATGAAAGAACAATAGTTGGTTCGGCTCGTCAATTTACGGGCCCTCCAAATCCATGTCTTCCATCGATTTTCCCTGGATTATGCGAAAGTCAGCGCTATGCCACCTCCTACCCACCAGCCATTTCACTCCGCCTCGACGCACCTCGCCCGCCGTTCCTGCCCGCCACCGACTTAACGTTGCCGCCGTACACTGCACTCTTAGCTGCTCCAGTCTCAGCCTTCCGACGAAATTGCCGCCGCCACCTTCCTCTCACACTCTCTCACCTCTCCAAGCAATCAGCCTTGCATATCTCTGTTTTGTTTATCAGAAACACTGTGCTTCAGCCCCTAACCGGCGCCGTTGGTGAGATGGTGCCGCTGCCCCTCATTTCTCAGATCCCCAAGTTCAATCAAGTTTCTAGATTTTGTGTGGCCATGAAGAAGCAGGAAGAAACCGTTGTAGCTTCAAGTGATCGCTACGAGATGAGGATTCCGCATGTGTTGAGTGTTGCTGGTTCTGATTCAGGAGCAGGGGCTGGAATCCAAGCGGATCTTAAGACTTGTGCTGCTCGTGGAGTGTACTGCTCCACTGTGATAACTGCTATTACTGCACAGAACACTGTAGGGGTTCAGGATGTGAACATTGTGCCGGAGGGTTTTGTTTCAGAGCAGCTGAAATCTGTTCTCTCTGATATGCAAGTGGATGTGGTGAAAACCGGAATGCTACCTTCTACCCGCATTGTTCAGGTTCTACATCAGCGCCTGAAGGAGTTTCCCGTTCAAGCCTTGGTGGTTGATCCTGTCATGGTGTCTACCAGTGGAGATGTACTAGCTGGTCCTACCATTGTCTCAGTGTTACAGGAAGAGCTTCTACCAATGGCTGACTTGGTAACTCCAAATTTGAAGGAAGCATCTGCCTTACTTGGTGGTATGCCACTTAAAACAATTTCTGACATGCGTCATGCTGCAACATTAATCCATCAGATGGGATCAAAGAATGTACTTGTCAAAGGTGGGGACCTTCCCGATTCATTGGATGCCGTCGATATATTCTTTGATGGCAAGGATTTGCATGAGCTACGTTCTTCGCGCATAAAGACATGCAACACTCATGGTACTGGATGCAGCTTAGCATCATGCATCGCAGCTGAACTTGCTAAAGGGTCTTCAATGTTCTCAGCTGTTAAGGCAAGCAAACAGTTCATTGAAAGAGCATTGAAGTACAGTAAGGACATCAGCATTGGAAATGGACCTCAAGGCCCATTTGATCATCTATGTCGTCTCAAGAGTCAAGAACATAGTTCCTACAGACAGGGGTATTTCAATCCAGCTGACTTATTCTTGTATGCTGTTACGGACTCAGGTATGAATAAGCGTTGGGACCGTTCTATTACCGATGCTGTTAAAGCTGCAGTGGAAGGAGGTGCTACTATTGTTCAAATAAGGGAAAAGGATGCTAAAACTCGTGATTTCTTGGAAGCAGCAAAGGCATGTATGAAGATTTGTCACGCACATGGAGTTCCATTGTTGATCAACGATCGCATTGACATCGCACTTGCGTGTGATGCTGATGGTGTACACGTTGGTCAGTCCGATATTCCTGCTCATGAAGTTCGCAGTCTTCTGGGCCCTAATAAGATCATCGGTGTCTCGTGCAAGACACCGGAGCAAGCAGAACAGGCATGGCTTGATGGTGCAGATTACATTGGGTGCGGTGGAGTTTATCCCACAAACACAAAAGCAAACAATCTGACTGTTGGGATTGATGGATTGAAAAGAGTTTGCTTAGCTTCCAAGTTACCTGTGGTTGCAATTGGTGGTATTAATCAAAGTAATGCAGCAGCTGTGATGGAAATTGGTGTCCCAAATCTTAAAGGTGTTGCAGTTGTGTCAGCTCTTTTTGATAGGCAATGTGTTTTAGAGGAGGCCTTAAAGTTACATGCAACTTTGGTGGAGGCTACAACAACAAATATATGA | 4677 | 47.23 | MGLFFFLSTMPISRLCLFLAFFPLFLSPLSAAAAAAAAAAADDRSFLLLRHHRHLLHQPFFPWTSLPPSQAPSSLSPLPQPQHQQPKLPFSSTSFSSPPKPFFPSYPSSPPPPPSPPLTALPTFPANISALLFPQPTSSSQHLHRHVFAIVISVSLVFSVLVFLVALYLYFRKRNRQISATDKASRTDNLRLYPPDIDTSDGVHKHRTSSTTSSKFLYLGTLATSREIDEEAAGNVEDGGGGIVESVSPVKMGSPELKPLPPLPRRNFAEDYQRNVDSNDNDDDEEDRDDEEFFSPRGSSVGGKDNVGSNRRLSPVKLFHNVETENFLRKSYNSSLNSGSPSVSVPNSPSPPLMLSPTSLRSKSPDSIIRFPVPLRPLPTLPVPPSPSLSSASSPMGGSGNTKNSPSRDSDLSELHRQCSNGFRMDYQQPLPVKLPPPRPPPPPPPPPMFWEIPQSSSLLNKEPNLGPPVLTVPSRPILSQNIAHMSAGEQSNTIGDAERMEENSKPKLKALHWDKVRTSSDRAMVWDQIKSSSFQLNEEMIESLFMVNNNNSSLMSKENGSVRQNMPLGSQENRVLDPKKSQNIAILLRALNVTIEEVSEALLEGNSDTLCTELLESLLKMAPTEEEERNLKEYKDDSPFKLGPAEKFLKVVLDVPFAFKRVDAMLYIANFESEVEYLNRSFETLEAACIELKNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRAEGYRHSTSDLNLTADKTQQSSLTNDVEFRKLGLQVVSGLSRELSNVKKAALMDADVLSNDVGKLAGGITKITEVIRLNEDMSKGGSKSNFSDSMNRFLGRAAEEVARVQVKEGIILSMVKEITEYFHGNLAKEEARPLRIFMVVCKEVGRINERTIVGSARQFTGPPNPCLPSIFPGLCESQRYATSYPPAISLRLDAPRPPFLPATDLTLPPYTALLAAPVSAFRRNCRRHLPLTLSHLSKQSALHISVLFIRNTVLQPLTGAVGEMVPLPLISQIPKFNQVSRFCVAMKKQEETVVASSDRYEMRIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAITAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSTRIVQVLHQRLKEFPVQALVVDPVMVSTSGDVLAGPTIVSVLQEELLPMADLVTPNLKEASALLGGMPLKTISDMRHAATLIHQMGSKNVLVKGGDLPDSLDAVDIFFDGKDLHELRSSRIKTCNTHGTGCSLASCIAAELAKGSSMFSAVKASKQFIERALKYSKDISIGNGPQGPFDHLCRLKSQEHSSYRQGYFNPADLFLYAVTDSGMNKRWDRSITDAVKAAVEGGATIVQIREKDAKTRDFLEAAKACMKICHAHGVPLLINDRIDIALACDADGVHVGQSDIPAHEVRSLLGPNKIIGVSCKTPEQAEQAWLDGADYIGCGGVYPTNTKANNLTVGIDGLKRVCLASKLPVVAIGGINQSNAAAVMEIGVPNLKGVAVVSALFDRQCVLEEALKLHATLVEATTTNI | 1558 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1122841 | 1136877 | - | ClCG11G000890.1 | Cla11g00087 | 283909 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00087 | 1558 | Pfam | Phosphomethylpyrimidine kinase | 1074 | 1318 | IPR013749 | - | |
Cla11g00087 | 1558 | SUPERFAMILY | Ribokinase-like | 1062 | 1321 | IPR029056 | - | |
Cla11g00087 | 1558 | SMART | it6_source | 499 | 912 | IPR015425 | - | |
Cla11g00087 | 1558 | TIGRFAM | HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 1067 | 1324 | IPR004399 | GO:0008972|GO:0009228 | |
Cla11g00087 | 1558 | TIGRFAM | thiE: thiamine-phosphate diphosphorylase | 1348 | 1537 | IPR034291 | GO:0004789|GO:0009228 | |
Cla11g00087 | 1558 | Hamap | Thiamine-phosphate synthase [thiE]. | 1345 | 1552 | IPR034291 | GO:0004789|GO:0009228 | |
Cla11g00087 | 1558 | Gene3D | Aldolase class I | 1341 | 1553 | IPR013785 | - | |
Cla11g00087 | 1558 | CDD | TMP_TenI | 1348 | 1548 | IPR022998 | - | |
Cla11g00087 | 1558 | Pfam | Thiamine monophosphate synthase | 1348 | 1533 | IPR022998 | - | |
Cla11g00087 | 1558 | CDD | HMPP_kinase | 1066 | 1309 | IPR004399 | GO:0008972|GO:0009228 | |
Cla11g00087 | 1558 | MobiDBLite | consensus disorder prediction | 431 | 451 | - | - | |
Cla11g00087 | 1558 | Gene3D | - | 1045 | 1340 | IPR029056 | - | |
Cla11g00087 | 1558 | MobiDBLite | consensus disorder prediction | 390 | 408 | - | - | |
Cla11g00087 | 1558 | MobiDBLite | consensus disorder prediction | 277 | 291 | - | - | |
Cla11g00087 | 1558 | MobiDBLite | consensus disorder prediction | 100 | 120 | - | - | |
Cla11g00087 | 1558 | PANTHER | FORMIN-RELATED | 49 | 941 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Cla11g00087 | 1558 | Gene3D | Formin, FH2 domain | 498 | 909 | IPR042201 | - | |
Cla11g00087 | 1558 | MobiDBLite | consensus disorder prediction | 71 | 120 | - | - | |
Cla11g00087 | 1558 | PANTHER | FORMIN-LIKE PROTEIN 2 | 49 | 941 | - | - | |
Cla11g00087 | 1558 | MobiDBLite | consensus disorder prediction | 427 | 451 | - | - | |
Cla11g00087 | 1558 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 499 | 930 | IPR015425 | - | |
Cla11g00087 | 1558 | Pfam | Formin Homology 2 Domain | 502 | 900 | IPR015425 | - | |
Cla11g00087 | 1558 | MobiDBLite | consensus disorder prediction | 231 | 312 | - | - | |
Cla11g00087 | 1558 | Coils | Coil | 669 | 689 | - | - | |
Cla11g00087 | 1558 | MobiDBLite | consensus disorder prediction | 333 | 364 | - | - | |
Cla11g00087 | 1558 | MobiDBLite | consensus disorder prediction | 71 | 99 | - | - | |
Cla11g00087 | 1558 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 436 | 900 | - | - | |
Cla11g00087 | 1558 | SUPERFAMILY | Thiamin phosphate synthase | 1343 | 1546 | IPR036206 | - | |
Cla11g00087 | 1558 | MobiDBLite | consensus disorder prediction | 380 | 413 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g01635 | Cla-Chr3:32236458 | Cla11g00087 | Cla-Chr11:1122841 | 1.33E-112 | dispersed | |
Cla07g00231 | Cla-Chr7:2572105 | Cla11g00087 | Cla-Chr11:1122841 | 6.10E-16 | dispersed | |
Cla08g00895 | Cla-Chr8:21415552 | Cla11g00087 | Cla-Chr11:1122841 | 7.89E-76 | dispersed | |
Cla11g00628 | Cla-Chr11:7222350 | Cla11g00087 | Cla-Chr11:1122841 | 6.57E-06 | dispersed | |
Cla11g00087 | Cla-Chr11:1122841 | Cla02g01189 | Cla-Chr2:25442545 | 1.19E-32 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00087 | - | K14153 | csv:101213912 | 1342.02 |