Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00117 ATGGAGGACGAGGAGCATAATGGGAATGGGAGTAGCCGGTTGGCGCCGCCGCGGGGTCCAGCGGAGCACTGTGTGGAAATTGTTCATCCGGTGGTTCCGCCGCCGAGGAGAAGCTGGATACAGAAGCTGCGCAACCGGCTGAAGGAAATATTTTTTCCGGACGATCCTCTCCGGCAGTTCAAAGGGCAGTCTCCGGCGAGGAAATGGGTGATTGGAGGTCAATATATATTCCCAATTCTTCAATGGGGGCCTCACTATAATCTTAGCCTTTTTAAATCTGATGTTGTTGCTGGTCTCACCATTGCTAGCTTGGCCATACCTCAGGGTATTAGCTATGCTAAGCTTGCCAATTTGCCTCCCATTGTTGGACTTTATTCAAGCTTTGTTCCACCACTAGTATATGCTGTTCTTGGAAGCTCAAGAGATCTAGCAGTTGGACCTGTTTCAATAGCATCACTAATATTGGGTTCCATGCTGAGACAACAAGTTTCTCCCATCAAAGATCCCATTCTTTTTCTTCAGCTTGGCTTCACTTCTACCTTCTTCGCGGGTCTCTTTCAAGCTTCGCTCGGGTTTCTCAGACTTGGTTTTATAATAGATTTTTTATCGAAGGCGACTTTGATTGGATTCATGGCAGGAGCAGCCATTATTGTGTCTTTGCAACAACTTAAAGGGTTGCTTGGAATAACCCATTTCACTAAACAGATGGGTTTGATTCCTGTTTTGTCCTCAGTTTTTCATCACACTCGTGAGTGGTCATGGCAGACTATACTGATGGGCTTTTGTTTCCTTCTCTTTCTTCTCCTCACAAGGCACATTAGCATGAAAAAGCCAAAATTGTTCTGGGTGTCAGCTGGAGCTCCTTTGGTGTCCGTCATTCTTTCAACCATTTTGGTCTTTGCATTCAAGGCGGATCGTCATGGCATCACTGTTATAGGAAAGTTGCAAGAAGGATTGAACCCACCTTCATGGAATATGCTTCGATTTGAAGGGTCACACCTTGGCCTTGTTATTAAGACTGGACTCGTCACCGGCATCATCTCTCTCACTGAAGGAATCGCAGTAGGGCGAACTTTTGCAGCTATAAAAGACTACCGCGTCGATGGTAACAAGGAAATGATTGCAATCGGCCTCATGAATGTCGTCGGCTCTTTCACTTCTTGCTATATCACAACAGGTGCATTTTCAAGGTCAGCGGTGAACCATAATGCGGGAGCAAAGACCGCAGTGTCGAACATCATAATGTCAGTGACGATAATGGTGACGTTGTTGTTTCTGATGCCTCTGTTTCAGTATACACCCAATCTGGTGTTGGCTGCCATCATCGTCACCGCCGTCGTCGGCCTTATCGACATCCCGGCTGCCTATGGCATTTGGAAGGTCGACAAGTTCGATTTCGTTGTGATGCTTTGTGCCTTCTTCGGCGTCATTCTCATCTCTGTTCAACATGGCCTCGCCATTGCTGTTGGCATATCAATTTTCAAGATCATCCTACAAATCACAAGGCCAAAAACAGTGATGTTGGGGAACATAGCTGGAACAGATATATATAGAAACCTTCACCATTACAAGGATGCAATGAGTGTCAAAGGCTTTCTCATTTTAAGCATTGAAGCTCCAATCAACTTTGCCAACACCACATATCTCAATGAAAGGATTTTGAGATGGATCGAAGATTATGAAGCTGATCAAGATCATATTAAGAAGGAGGACTCCAGCCTTCAGTTTGTTGTTTTAGAATTGTCAGCTGTGAGTGCTATAGACACTAGTGGAGTTTTACTCTTCAAAGACCTAAGGAGAGCATTGGAAAAGAAGGGTGTTGAGCTAGTGTTGGTGAACCCATTGGGTGAAGTTTTGGAAAAGTTGCAAAAGGCAGATGAAAATCAAGAGATTTTGAGGCCAAATAATGTATTCTTGACTGTGGGAGAGGCCATTGCTTCACTAGCAACAACAATGAAGGGACAATCCTCAACTATATAG 1980 44.8 MEDEEHNGNGSSRLAPPRGPAEHCVEIVHPVVPPPRRSWIQKLRNRLKEIFFPDDPLRQFKGQSPARKWVIGGQYIFPILQWGPHYNLSLFKSDVVAGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLILGSMLRQQVSPIKDPILFLQLGFTSTFFAGLFQASLGFLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKGLLGITHFTKQMGLIPVLSSVFHHTREWSWQTILMGFCFLLFLLLTRHISMKKPKLFWVSAGAPLVSVILSTILVFAFKADRHGITVIGKLQEGLNPPSWNMLRFEGSHLGLVIKTGLVTGIISLTEGIAVGRTFAAIKDYRVDGNKEMIAIGLMNVVGSFTSCYITTGAFSRSAVNHNAGAKTAVSNIIMSVTIMVTLLFLMPLFQYTPNLVLAAIIVTAVVGLIDIPAAYGIWKVDKFDFVVMLCAFFGVILISVQHGLAIAVGISIFKIILQITRPKTVMLGNIAGTDIYRNLHHYKDAMSVKGFLILSIEAPINFANTTYLNERILRWIEDYEADQDHIKKEDSSLQFVVLELSAVSAIDTSGVLLFKDLRRALEKKGVELVLVNPLGEVLEKLQKADENQEILRPNNVFLTVGEAIASLATTMKGQSSTI 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1459483 1470738 - ClCG11G001210.2 Cla11g00117 283939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00117 659 ProSiteProfiles STAS domain profile. 522 648 IPR002645 -
Cla11g00117 659 Pfam STAS domain 523 644 IPR002645 -
Cla11g00117 659 PANTHER BNAA09G30120D PROTEIN 28 654 IPR030313 -
Cla11g00117 659 Pfam Sulfate permease family 91 471 IPR011547 GO:0016021
Cla11g00117 659 Gene3D STAS domain 502 651 IPR036513 -
Cla11g00117 659 PANTHER SULFATE TRANSPORTER 28 654 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cla11g00117 659 TIGRFAM sulP: sulfate permease 78 643 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cla11g00117 659 SUPERFAMILY SpoIIaa-like 528 648 IPR036513 -
Cla11g00117 659 CDD STAS_SulP_like_sulfate_transporter 523 641 - -
Cla11g00117 659 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01494 Cla-Chr9:28880621 Cla11g00117 Cla-Chr11:1459483 0 dispersed
Cla11g00117 Cla-Chr11:1459483 Cla11g01499 Cla-Chr11:28656522 0 dispersed
Cla11g00117 Cla-Chr11:1459483 Cla09g00202 Cla-Chr9:1986567 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00117 K17471 - csv:101219163 1180.62