Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00133 ATGGCGGTGAAGAAAATGAAGTGGAGATCCATTTTCTCCAGCTGCTGCGAGGTTGATTCGCAGTCGTCGGAGGTGATGAAAGTAGTGGCGGCGAATAAGCCGAGTTCCTTCCAAAGGATTTCGAAACTGGATTTGAGTAACCCTAATTCCACTCTCTCTGAAGATCTTTCCATTTCTCTCGCCGGATCTGACATCCACGCTTTCACTCTCGCCGAATTGAAGCTCATCTCTCAGACCTTTTCTTCCTCAAACTTCCTTGGAGAAGGTGGATTCGGCCCCGTCTACAAAGGATTCCTCGATGACAATCTCAGGCCTGGCTTGTCTCCTCAGCCCGTCGCTATTAAACTCCTCGATTTGGATGGAACACAAGGCCACAGAGAATGGCTGACGGAGGTGATTTTTCTAGGACAGCTTAAGCACGCTCATCTAGTGAAGCTAATTGGATATTGCTGCGAAGACGAACATAGGATGCTTGTGTATGAGTATATGCCCAGAGGAAGCTTGGAGAATCAACTTTTCAAAAAATATTCGATCCCATTGCCATGGTCGACGAGAATGAAGATCGCTCTTGGAGCTGCCAAGGGTCTGGCCTTCCTCCACGAAGCAGATAAACCAGTAATTTACCGAGATTTCAAAGCCTCCAACATACTGCTCGACTCTGATTATACCGCGAAGCTGTCTGATTTTGGACTAGCCAAAGACGGTCCAGAAGGAGACAACACGCATGTCTCGACCCGAGTAATGGGGACGCATGGATATGCTGCGCCGGAGTATATAATGACGGGTCATTTGACGGCAATGAGTGACGTGTATAGCTTCGGAGTAGTGCTTTTGGAGTTGTTGACAGGGCGGCGGTCGGTGGAGAAGAGCAGCCGTAAGAGGCAACAGAACTTGGCAGAGTGGGCGAGGCCGATGCTGAATGATCCAAGGAAGCTAAGCCGTATAATAGACCCAAGACTTGAAGGCCAATACTCGGAAATGGGAGCTCAGAAAGCAGCCACATTGGCTTACCAATGCTTGAGCCACCGCCCAAAGCAGAGGCCCACCATGAGCGCCGTCGTCAAGGTATTAGAGCCGCTTAAGGATTTCGATGACATTTCTTCAGGCACCTTCGTTTATACGGTTCTCGCCCAAAACGATCTTCACAACAAACCAACGGGAAATTCAACTTTAGAAGAAGCTAAAAAGTAA 1191 48.7 MAVKKMKWRSIFSSCCEVDSQSSEVMKVVAANKPSSFQRISKLDLSNPNSTLSEDLSISLAGSDIHAFTLAELKLISQTFSSSNFLGEGGFGPVYKGFLDDNLRPGLSPQPVAIKLLDLDGTQGHREWLTEVIFLGQLKHAHLVKLIGYCCEDEHRMLVYEYMPRGSLENQLFKKYSIPLPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDNTHVSTRVMGTHGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVEKSSRKRQQNLAEWARPMLNDPRKLSRIIDPRLEGQYSEMGAQKAATLAYQCLSHRPKQRPTMSAVVKVLEPLKDFDDISSGTFVYTVLAQNDLHNKPTGNSTLEEAKK 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1671135 1673181 - ClCG11G001420.1 Cla11g00133 283955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00133 396 Gene3D Transferase(Phosphotransferase) domain 1 163 371 - -
Cla11g00133 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Cla11g00133 396 CDD STKc_IRAK 86 360 - -
Cla11g00133 396 Gene3D Phosphorylase Kinase; domain 1 44 162 - -
Cla11g00133 396 SUPERFAMILY Protein kinase-like (PK-like) 56 358 IPR011009 -
Cla11g00133 396 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00133 396 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 26 381 - -
Cla11g00133 396 PANTHER OS01G0588500 PROTEIN-RELATED 26 381 - -
Cla11g00133 396 Pfam Protein tyrosine and serine/threonine kinase 84 357 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla03g01445 Cla11g00133 CCT
Cla03g01445 Cla11g00133 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla11g00133 Cla-Chr11:1671135 Cla11g01094 Cla-Chr11:22362922 2.84E-143 dispersed
Cla11g01329 Cla-Chr11:26771565 Cla11g00133 Cla-Chr11:1671135 1.70E-27 dispersed
Cla03g01404 Cla-Chr3:29538919 Cla11g00133 Cla-Chr11:1671135 1.31E-146 transposed
Cla05g01635 Cla-Chr5:27790343 Cla11g00133 Cla-Chr11:1671135 1.23E-162 transposed
Cla07g01069 Cla-Chr7:27292105 Cla11g00133 Cla-Chr11:1671135 1.13E-136 transposed
Cla10g02160 Cla-Chr10:37197178 Cla11g00133 Cla-Chr11:1671135 3.07E-146 transposed
Cla11g00133 Cla-Chr11:1671135 Cla03g01445 Cla-Chr3:30012403 0 wgd
Cla11g00133 Cla-Chr11:1671135 Cla09g00094 Cla-Chr9:914110 7.36E-157 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80909 PF07714 PK_Tyr_Ser-Thr 9.90E-48 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00133 - - csv:101209441 732.635