Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00136 ATGACCTCAAGAAACAGATTTCCTTTCACTGCAGCTCAATGGCAAGAGCTGGAACATCAAGCTTTGATCTTTAAGTACATGGTCTCCGGCATTCCTGTCCCTCCTGATCTGCTTTTCACCATTAAAAGAACTTCTTTGTCTTTGGATACTCCTTTCATTTCCAGGCTCTTTCCCCACCAATATCCAGATGTTGGATGGAACTATGTGCAAATGGGTTCAGGGAGGAAAATTGATCCGGAGCCTGGAAGATGTAGAAGAACAGATGGGAAAAAATGGAGATGCTCCAAAGAAGCATACCCAGATTCTAAATATTGTGAAAGACATATGCATAGAGGTAAGAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACAACAATAACAACTGCTTTAAACTCTAATCCATCATCATCATCATCACTTACCCATAACTCCACTCATTCCTTTGCTTCACTCACCAACTCTGAAACACATCCCCATCCCCATCCTTTTCTCTATCAACATGCTTCTGCTTCTTCTGCTCATTCATCCTTACTTCCAGATTACAGAAGAAACAGGTATGTTTATGGGGGGAAGGAAGAAGATGTTGATGAACAACCCTTTGTGAGGGAAGAACAACATTCAGGGAACATGAGAGGCTTCTCTGCTTCATCCATGGAAGATTCTTGGCAGCTAACTCCTTTGACAATGAGTAGCTCTTCCTCATCTTCCAGATACAAGAATGGTTCTGCTTTAGAAGGTGATTACTCTTCTTACTTGCAGCTACAGAGCTTTGGAAAATATAATGAGATGCAGAGTAAGATGGAAAGAGAGGAACCACAGAAGATTATGCATCATTTTTTTGATGAATGGTCTGCTAAAGACAGAGAATCTTGGGTTGATTTGGATGATAAGTCATCCAACAATACTGGCGCAGTTTCTGCAACTAGGCTTTCAATGTCTATTCCTAACCATGACTTCTCCTCTATCTTCACTTCCAATAAGCATAATGAAAACTAA 1002 40.62 MTSRNRFPFTAAQWQELEHQALIFKYMVSGIPVPPDLLFTIKRTSLSLDTPFISRLFPHQYPDVGWNYVQMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTTITTALNSNPSSSSSLTHNSTHSFASLTNSETHPHPHPFLYQHASASSAHSSLLPDYRRNRYVYGGKEEDVDEQPFVREEQHSGNMRGFSASSMEDSWQLTPLTMSSSSSSSRYKNGSALEGDYSSYLQLQSFGKYNEMQSKMEREEPQKIMHHFFDEWSAKDRESWVDLDDKSSNNTGAVSATRLSMSIPNHDFSSIFTSNKHNEN 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1698303 1699905 + ClCG11G001460.1 Cla11g00136 283958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00136 333 Pfam WRC 79 121 IPR014977 -
Cla11g00136 333 ProSiteProfiles WRC domain profile. 78 122 IPR014977 -
Cla11g00136 333 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cla11g00136 333 SMART QLQ_2 7 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cla11g00136 333 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cla11g00136 333 PANTHER - 2 324 IPR031137 GO:0005634|GO:0006351|GO:0032502
Cla11g00136 333 PANTHER GROWTH-REGULATING FACTOR 6 2 324 - -
Cla11g00136 333 MobiDBLite consensus disorder prediction 129 161 - -
Cla11g00136 333 MobiDBLite consensus disorder prediction 129 166 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla03g01458 Cla11g00136 CCT
Cla03g01458 Cla11g00136 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00752 Cla-Chr2:9355515 Cla11g00136 Cla-Chr11:1698303 2.76E-47 dispersed
Cla07g01338 Cla-Chr7:30595404 Cla11g00136 Cla-Chr11:1698303 2.93E-67 dispersed
Cla08g01639 Cla-Chr8:29008933 Cla11g00136 Cla-Chr11:1698303 1.03E-31 dispersed
Cla10g01826 Cla-Chr10:34203610 Cla11g00136 Cla-Chr11:1698303 3.03E-38 dispersed
Cla11g00136 Cla-Chr11:1698303 Cla02g01530 Cla-Chr2:29837644 4.55E-06 dispersed
Cla11g00136 Cla-Chr11:1698303 Cla03g01458 Cla-Chr3:30119657 1.39E-105 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61987 PF08879 WRC 6.70E-21 No_clan Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00136 - - bhj:120079024 554.288